RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 ZNF121P58317 390 aaPredicted RBP8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 EFNB1P98172 346 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 MZT1Q08AG7 82 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 EIF2B1Q14232 305 aaKnown RBP8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 RCN1Q15293 331 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 TAF13Q15543 124 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 KCNJ8Q15842 424 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 AWAT1Q58HT5 328 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 PLBD1Q6P4A8 553 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 FAHD1Q6P587 224 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 ZNF826PQ6ZT77 177 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 HS3ST5Q8IZT8 346 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 PARP8Q8N3A8 854 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 GALNT4Q8N4A0 578 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 C19orf18Q8NEA5 215 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 DMRTB1Q96MA1 342 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 SLC25A19Q9HC21 320 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 SMURF1Q9HCE7 757 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 TRIM36Q9NQ86 728 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 C14orf119Q9NWQ9 140 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 PDP1Q9P0J1 537 aaPredicted RBP8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 DNAJB9Q9UBS3 223 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 CLN8Q9UBY8 286 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 SOX21Q9Y651 276 aaPredicted RBP8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 OOEPA6NGQ2 149 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 DNAJC9-AS1A6NH13 148 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 ACOD1A6NK06 481 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 ANKRD30BLA7E2S9 258 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 H3BN98 237 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 ENSAO43768 121 aaKnown RBP8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 ATP6V1G2O95670 118 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 CST4P01036 141 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 ANXA8P13928 327 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 MUC1P15941 1255 aaPredicted RBP8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 EGR1P18146 543 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 AMY2BP19961 511 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 PAICSP22234 425 aaKnown RBP8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 PRKACGP22612 351 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 MTNR1AP48039 350 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 ACTG1P63261 375 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 SLC35D3Q5M8T2 416 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 ATPAF1Q5TC12 328 aaPredicted RBP8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 CD276Q5ZPR3 534 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 SFRP4Q6FHJ7 346 aaPredicted RBP8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 DEGS2Q6QHC5 323 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 WDR82Q6UXN9 313 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 RBMS3Q6XE24 437 aaKnown RBP8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 SPATC1Q76KD6 591 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 FAM90A1Q86YD7 464 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 ERI1Q8IV48 349 aaKnown RBP8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 CPOQ8IVL8 374 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 LY6G5BQ8NDX9 201 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 CSNK2A3Q8NEV1 391 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 OR1M1Q8NGA1 313 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 OR6N2Q8NGY6 317 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 DNAJC9Q8WXX5 260 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 REEP6Q96HR9 211 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 ZNF747Q9BV97 191 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 OR10A2Q9H208 303 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 OR51V1Q9H2C8 321 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 PPP1R3EQ9H7J1 279 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 NIPAL2Q9H841 368 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 C1orf123Q9NWV4 160 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 ERVK-18Q9QC07 812 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 KLHDC2Q9Y2U9 406 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 RHBDD3Q9Y3P4 386 aa8.06□□□□□ -1.12
TMEM39A-210ENST00000490099 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 ZNF879B4DU55 563 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 PRR23D1E9PI22 279 aaPredicted RBP8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 H3BNX3 289 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 P2RY10O00398 339 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 GNGT2O14610 69 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 TIPRLO75663 272 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 BAG2O95816 211 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 ECDO95905 644 aaPredicted RBP8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 IGLV3-1P01715 115 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 ANXA2P07355 339 aaKnown RBP8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 GRPP07492 148 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 LYNP07948 512 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 PRR23D2P0DMB1 279 aaPredicted RBP8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 ACKR3P25106 362 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 DCTDP32321 178 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 TGM4P49221 684 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 FGF12P61328 243 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 ROM1Q03395 351 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 FOXL1Q12952 345 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 SLC9A3R2Q15599 337 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 ATP6AP1Q15904 470 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 SNCBQ16143 134 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 FAM57BQ71RH2 274 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 PQLC1Q8N2U9 271 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 C3orf56Q8N813 242 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 SGMS2Q8NHU3 365 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 OR5P3Q8WZ94 311 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 C12orf43Q96C57 262 aaKnown RBP8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 ZMYND19Q96E35 227 aaPredicted RBP8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 LYZL4Q96KX0 146 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 TBX15Q96SF7 602 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 TEAD3Q99594 435 aa8.05□□□□□ -1.12
TMEM39A-210ENST00000490099 YIPF3Q9GZM5 350 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms