RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 IGHMP01871 453 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 OR5AC1P0C628 307 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 ZNF708P17019 499 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 PBLDP30039 288 aaPredicted RBP0.45□□□□□ -2.34
CCDC93-209ENST00000488908 PRSS3P35030 304 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 UBE2HP62256 183 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 ATP5G2Q06055 141 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 CHIT1Q13231 466 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 REEP3Q6NUK4 255 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 C12orf54Q6X4T0 127 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 TRMT10CQ7L0Y3 403 aaKnown RBP0.45□□□□□ -2.34
CCDC93-209ENST00000488908 SLC16A14Q7RTX9 510 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 PPP1R42Q7Z4L9 355 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 COMTD1Q86VU5 262 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 LRRC8AQ8IWT6 810 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 CMTM1Q8IZ96 169 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 ZCCHC7Q8N3Z6 543 aaKnown RBP0.45□□□□□ -2.34
CCDC93-209ENST00000488908 RPRMLQ8N4K4 120 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 OR7G2Q8NG99 324 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 OR4A4PQ8NGN8 299 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 OR8J1Q8NGP2 316 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 OR5K2Q8NHB8 316 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 KCNG3Q8TAE7 436 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 SFXN5Q8TD22 340 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 PEBP4Q96S96 227 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 SFXN3Q9BWM7 321 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 TBL1XR1Q9BZK7 514 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 VSIRQ9H7M9 311 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 ZNF442Q9H7R0 627 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 MRM3Q9HC36 420 aaKnown RBP0.45□□□□□ -2.34
CCDC93-209ENST00000488908 HYPKQ9NX55 129 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 DCAF16Q9NXF7 216 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 CES1P1Q9UKY3 287 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 TRAPPC1Q9Y5R8 145 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 DYSFO75923 2080 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 NOTCH1P46531 2555 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 TRBV9A0A0B4J1U6 114 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 TRGV4A0A0C4DH28 118 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 A0A1W2PNM2 257 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 TMEM72A0PK05 275 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 BICDL2A1A5D9 508 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 GGTLC3B5MD39 225 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 M0R3G1 203 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 FARS2O95363 451 aaKnown RBP0.44□□□□□ -2.34
CCDC93-209ENST00000488908 LSM8O95777 96 aaKnown RBP0.44□□□□□ -2.34
CCDC93-209ENST00000488908 PGA5P0DJD9 388 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 CSNK2A2P19784 350 aaPredicted RBP0.44□□□□□ -2.34
CCDC93-209ENST00000488908 RAB4AP20338 218 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 PRPS1L1P21108 318 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 USF1P22415 310 aaPredicted RBP0.44□□□□□ -2.34
CCDC93-209ENST00000488908 OR1E1P30953 314 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 PPICP45877 212 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 OR1G1P47890 313 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 RGS6P49758 472 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 NUDT2P50583 147 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 BST1Q10588 318 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 TSC22D1Q15714 1073 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 HADHQ16836 314 aaKnown RBP0.44□□□□□ -2.34
CCDC93-209ENST00000488908 HHATQ5VTY9 493 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 KCTD16Q68DU8 428 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 C22orf42Q6IC83 251 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 SLC8B1Q6J4K2 584 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 ZNF322Q6U7Q0 402 aaPredicted RBP0.44□□□□□ -2.34
CCDC93-209ENST00000488908 Q6ZSA8 131 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 HORMAD1Q86X24 394 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 CDH26Q8IXH8 852 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 DEFB119Q8N690 84 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 OR9K2Q8NGE7 335 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 OR4D6Q8NGJ1 314 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 OR4K13Q8NH42 304 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 LYPD6BQ8NI32 183 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 CAPSLQ8WWF8 208 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 ZNF606Q8WXB4 792 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 OR5P3Q8WZ94 311 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 S100PBPQ96BU1 408 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 TBC1D31Q96DN5 1066 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 YIPF6Q96EC8 236 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 MRPL48Q96GC5 212 aaKnown RBP0.44□□□□□ -2.34
CCDC93-209ENST00000488908 SNF8Q96H20 258 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 PRRC1Q96M27 445 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 ZNF75AQ96N20 296 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 CENPKQ9BS16 269 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 GON7Q9BXV9 100 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 MS4A8Q9BY19 250 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 TMEM38AQ9H6F2 299 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 TMEM165Q9HC07 324 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 FAM60AQ9NP50 221 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 FBXO8Q9NRD0 319 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 ACOT9Q9Y305 439 aa0.44□□□□□ -2.34
CCDC93-209ENST00000488908 BRD4O60885 1362 aaPredicted RBP0.44□□□□□ -2.34
CCDC93-209ENST00000488908 A0A0A6YYD5 115 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 IGKV1-6A0A0C4DH72 117 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 IGLL5B9A064 214 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 GABRPO00591 440 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 PSPHP1O15172 72 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 CDH16O75309 829 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 ENTPD6O75354 484 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 OR2J3O76001 311 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 S1PR2O95136 353 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 SMC2O95347 1197 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms