RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 PARPBPQ9NWS1 579 aa12.21□□□□□ -0.45
NPHP4-207ENST00000470763 A0A0A6YYD4 124 aa12.21□□□□□ -0.46
NPHP4-207ENST00000470763 SLC31A2O15432 143 aa12.21□□□□□ -0.46
NPHP4-207ENST00000470763 MPIG6BO95866 241 aa12.21□□□□□ -0.46
NPHP4-207ENST00000470763 HIST1H1BP16401 226 aaKnown RBP12.21□□□□□ -0.46
NPHP4-207ENST00000470763 DLX2Q07687 328 aaPredicted RBP12.21□□□□□ -0.46
NPHP4-207ENST00000470763 VITQ6UXI7 678 aa12.21□□□□□ -0.46
NPHP4-207ENST00000470763 NKAIN3Q8N8D7 197 aa12.21□□□□□ -0.46
NPHP4-207ENST00000470763 LIPHQ8WWY8 451 aa12.21□□□□□ -0.46
NPHP4-207ENST00000470763 CNTNAP3Q9BZ76 1288 aa12.21□□□□□ -0.46
NPHP4-207ENST00000470763 SMOC1Q9H4F8 434 aa12.21□□□□□ -0.46
NPHP4-207ENST00000470763 COA3Q9Y2R0 106 aaPredicted RBP12.21□□□□□ -0.46
NPHP4-207ENST00000470763 R4GMQ9 66 aa12.21□□□□□ -0.46
NPHP4-207ENST00000470763 RTTNQ86VV8 2226 aa12.21□□□□□ -0.46
NPHP4-207ENST00000470763 A0A1W2PP11 408 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 IGFALSP35858 605 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 QRFPP83859 136 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 SSX2Q16385 188 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 PLAC9Q5JTB6 97 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 RPUSD3Q6P087 351 aaKnown RBP12.2□□□□□ -0.46
NPHP4-207ENST00000470763 MED25Q71SY5 747 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 C1QL4Q86Z23 238 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 OR13G1Q8NGZ3 307 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 ADAT3Q96EY9 351 aaPredicted RBP12.2□□□□□ -0.46
NPHP4-207ENST00000470763 RARRES2Q99969 163 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 ST6GALNAC5Q9BVH7 336 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 SUCNR1Q9BXA5 334 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 FOXQ1Q9C009 403 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 SH3BGRL3Q9H299 93 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 PPP4R1LQ9P1A2 415 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 A0A087X0M5 115 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 A0A1B0GX30 115 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 RAD51DO75771 328 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 TBPP20226 339 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 DDTP30046 118 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 DCXRQ7Z4W1 244 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 OR5H2Q8NGV7 314 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 SLC22A18Q96BI1 424 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 SSX3Q99909 188 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 SLC35B3Q9H1N7 401 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 HEBP2Q9Y5Z4 205 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 WDFY4Q6ZS81 3184 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 IGLV1-36A0A0B4J1U3 117 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 ZNF726A6NNF4 738 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 LINC01565O15544 149 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 SOD3P08294 240 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 FPR2P25090 351 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 PPM1AP35813 382 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 PPP1CCP36873 323 aaKnown RBP12.2□□□□□ -0.46
NPHP4-207ENST00000470763 BTG2P78543 158 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 CCINQ13939 588 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 CST6Q15828 149 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 KDM8Q8N371 416 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 MEMO1Q9Y316 297 aa12.2□□□□□ -0.46
NPHP4-207ENST00000470763 CXCL1P09341 107 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 AMY2BP19961 511 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 SERPINA2P20848 420 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 TAS2R60P59551 318 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 FAM3AP98173 230 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 GAB4Q2WGN9 574 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 REC114Q7Z4M0 266 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 C19orf12Q9NSK7 152 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 RCL1Q9Y2P8 373 aaKnown RBP12.19□□□□□ -0.46
NPHP4-207ENST00000470763 MUC22E2RYF6 1773 aaPredicted RBP12.19□□□□□ -0.46
NPHP4-207ENST00000470763 BTBD17A6NE02 478 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 ARGFXA6NJG6 315 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 MASP2O00187 686 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 F10P00742 488 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 RPS2P15880 293 aaKnown RBP12.19□□□□□ -0.46
NPHP4-207ENST00000470763 KHDC3LQ587J8 217 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 SOHLH1Q5JUK2 328 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 AADACL3Q5VUY0 350 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 KDF1Q8NAX2 398 aaPredicted RBP12.19□□□□□ -0.46
NPHP4-207ENST00000470763 HSD17B11Q8NBQ5 300 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 MFSD8Q8NHS3 518 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 NTNG2Q96CW9 530 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 YPEL4Q96NS1 127 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 PRRX2Q99811 253 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 APOOQ9BUR5 198 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 ADAM19Q9H013 955 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 LUZP4Q9P127 313 aa12.19□□□□□ -0.46
NPHP4-207ENST00000470763 PHF3Q92576 2039 aaKnown RBP12.19□□□□□ -0.46
NPHP4-207ENST00000470763 A0A1W2PQU0 124 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 HIST1H2BKO60814 126 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 SRSF10O75494 262 aaKnown RBP12.18□□□□□ -0.46
NPHP4-207ENST00000470763 GAPDHP04406 335 aaKnown RBP12.18□□□□□ -0.46
NPHP4-207ENST00000470763 HIST1H2BJP06899 126 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 DANCRP0C864 163 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 BCKDHBP21953 392 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 HIST1H2BOP23527 126 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 HIST1H2BBP33778 126 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 OR3A2P47893 321 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 GABRA4P48169 554 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 RAB38P57729 211 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 HIST1H2BDP58876 126 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 PPP1CAP62136 330 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 LSM6P62312 80 aaKnown RBP12.18□□□□□ -0.46
NPHP4-207ENST00000470763 HIST1H2BCP62807 126 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 FMODQ06828 376 aa12.18□□□□□ -0.46
NPHP4-207ENST00000470763 ARFRP1Q13795 201 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms