RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 CNBD2Q96M20 576 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 TMEM100Q9NV29 134 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 GTF2A1LQ9UNN4 478 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 EXOSC1Q9Y3B2 195 aaKnown RBP16.2■□□□□ 0.18
USP11-205ENST00000467378 PCDHGB5Q9Y5G0 923 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 H0YL77 283 aa16.19■□□□□ 0.18
USP11-205ENST00000467378 MLNRO43193 412 aa16.19■□□□□ 0.18
USP11-205ENST00000467378 DENRO43583 198 aaKnown RBP16.19■□□□□ 0.18
USP11-205ENST00000467378 SPRNQ5BIV9 151 aa16.19■□□□□ 0.18
USP11-205ENST00000467378 BCL2L15Q5TBC7 163 aa16.19■□□□□ 0.18
USP11-205ENST00000467378 AHSA2Q719I0 299 aa16.19■□□□□ 0.18
USP11-205ENST00000467378 ZNF525Q8N782 197 aa16.19■□□□□ 0.18
USP11-205ENST00000467378 ZNF540Q8NDQ6 660 aa16.19■□□□□ 0.18
USP11-205ENST00000467378 OR2Z1Q8NG97 314 aa16.19■□□□□ 0.18
USP11-205ENST00000467378 CHODLQ9H9P2 273 aa16.19■□□□□ 0.18
USP11-205ENST00000467378 GPR84Q9NQS5 396 aa16.19■□□□□ 0.18
USP11-205ENST00000467378 A0A1B0GTI1 187 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 DAOP14920 347 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 ACKR3P25106 362 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 KIR3DL2P43630 455 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 NANOS3P60323 173 aaKnown RBP16.18■□□□□ 0.18
USP11-205ENST00000467378 WDR38Q5JTN6 314 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 C12orf54Q6X4T0 127 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 Q6ZSR3 168 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 STX19Q8N4C7 294 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 PLPP7Q8NBV4 271 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 OR2G2Q8NGZ5 317 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 UBASH3BQ8TF42 649 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 ELMOD3Q96FG2 381 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 SCN3BQ9NY72 215 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 MRPL15Q9P015 296 aaKnown RBP16.18■□□□□ 0.18
USP11-205ENST00000467378 FRRS1LQ9P0K9 344 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 CLEC2DQ9UHP7 191 aa16.18■□□□□ 0.18
USP11-205ENST00000467378 CAB39Q9Y376 341 aaPredicted RBP16.18■□□□□ 0.18
USP11-205ENST00000467378 LYNX1G3V0Z9 82 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 P2RY10O00398 339 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 HLA-DPB1P04440 258 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 HTR1AP08908 422 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 CCDC159P0C7I6 412 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 IGHV4-31P0DP07 118 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 LYNX1P0DP58 116 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 CA6P23280 308 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 COL8A2P25067 703 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 C21orf33P30042 268 aaPredicted RBP16.17■□□□□ 0.18
USP11-205ENST00000467378 DSCR9P59020 149 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 TNFAIP6P98066 277 aaPredicted RBP16.17■□□□□ 0.18
USP11-205ENST00000467378 OR2G6Q5TZ20 316 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 KRT74Q7RTS7 529 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 ZNF786Q8N393 782 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 CSNK2A3Q8NEV1 391 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 YIPF5Q969M3 257 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 ITFG2Q969R8 447 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 SLC22A4Q9H015 551 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 MYOZ1Q9NP98 299 aaPredicted RBP16.17■□□□□ 0.18
USP11-205ENST00000467378 DECR2Q9NUI1 292 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 PAK1IP1Q9NWT1 392 aaPredicted RBP16.17■□□□□ 0.18
USP11-205ENST00000467378 IL19Q9UHD0 177 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 KCNS2Q9ULS6 477 aa16.17■□□□□ 0.18
USP11-205ENST00000467378 LOC390937A0A1W2PQ73 354 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 PTGES3LE9PB15 166 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 E9PI62 339 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 GMDSO60547 372 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 CDK1P06493 297 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 ATP6V1B1P15313 513 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 SLC25A16P16260 332 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 MYL12AP19105 171 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 HNF1AP20823 631 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 CCL1P22362 96 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 CFPP27918 469 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 CRYBB2P43320 205 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 MAP2K3P46734 347 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 PDLIM4P50479 330 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 CCR9P51686 369 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 SLC35A2P78381 396 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 MED21Q13503 144 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 FAM120AOSQ5T036 256 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 KLHL36Q8N4N3 616 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 OR10AD1Q8NGE0 317 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 RDH5Q92781 318 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 FAM71F1Q96KD3 344 aaPredicted RBP16.16■□□□□ 0.18
USP11-205ENST00000467378 EGLN1Q9GZT9 426 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 DUSP21Q9H596 190 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 SAP30LQ9HAJ7 183 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 CHCHD3Q9NX63 227 aaKnown RBP16.16■□□□□ 0.18
USP11-205ENST00000467378 UBAP1Q9NZ09 502 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 V9GYS6 101 aa16.16■□□□□ 0.18
USP11-205ENST00000467378 ANKRD30BLA7E2S9 258 aa16.15■□□□□ 0.18
USP11-205ENST00000467378 F5H5P2 479 aa16.15■□□□□ 0.18
USP11-205ENST00000467378 TPD52L2O43399 206 aaKnown RBP16.15■□□□□ 0.18
USP11-205ENST00000467378 CSF3P09919 207 aa16.15■□□□□ 0.18
USP11-205ENST00000467378 TNFSF4P23510 183 aa16.15■□□□□ 0.18
USP11-205ENST00000467378 CRHBPP24387 322 aa16.15■□□□□ 0.18
USP11-205ENST00000467378 GBX2P52951 348 aaPredicted RBP16.15■□□□□ 0.18
USP11-205ENST00000467378 MRPS11P82912 194 aaKnown RBP16.15■□□□□ 0.18
USP11-205ENST00000467378 MRPL28Q13084 256 aaKnown RBP16.15■□□□□ 0.18
USP11-205ENST00000467378 ALKBH1Q13686 389 aaKnown RBP16.15■□□□□ 0.18
USP11-205ENST00000467378 ODF4Q2M2E3 257 aa16.15■□□□□ 0.18
USP11-205ENST00000467378 RNLSQ5VYX0 342 aa16.15■□□□□ 0.18
USP11-205ENST00000467378 TMPRSS11AQ6ZMR5 421 aa16.15■□□□□ 0.18
USP11-205ENST00000467378 COMMD2Q86X83 199 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms