RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PRB3Q04118 309 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 TRAP1Q12931 704 aaKnown RBP3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 ICAM4Q14773 271 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 OR8B8Q15620 311 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 KRTAP27-1Q3LI81 207 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 ZNF404Q494X3 552 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 GLYATL3Q5SZD4 288 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 ZNF362Q5T0B9 420 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 WDR25Q64LD2 544 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 C16orf87Q6PH81 154 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 BTNL3Q6UXE8 466 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 LRRN1Q6UXK5 716 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 HACD2Q6Y1H2 254 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 COLCA1Q6ZS62 124 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 PGAP1Q75T13 922 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 ADCK1Q86TW2 530 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 PDZD9Q8IXQ8 264 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 MUC20Q8N307 709 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 FGFRL1Q8N441 504 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 KIR3DL3Q8N743 410 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 OR8B3Q8NGG8 313 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 FANK1Q8TC84 345 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 Q8TCH9 128 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 GNPDA2Q8TDQ7 276 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 SLC25A28Q96A46 364 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 TMIGD2Q96BF3 282 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 UPRTQ96BW1 309 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 ZMYND19Q96E35 227 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 SEH1LQ96EE3 360 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 PLEKHA8Q96JA3 519 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 COG8Q96MW5 612 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 OR8B2Q96RD0 313 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 DDOQ99489 341 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 ATF6BQ99941 703 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 PCGF1Q9BSM1 259 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 HCAR1Q9BXC0 346 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 NDEL1Q9GZM8 345 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 HDHD2Q9H0R4 259 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 CCDC134Q9H6E4 229 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 GORASP2Q9H8Y8 452 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 MARCH7Q9H992 704 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 SPAG4Q9NPE6 437 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 CENPMQ9NSP4 180 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 ARL8BQ9NVJ2 186 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 CTSZQ9UBR2 303 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 DNAJB11Q9UBS4 358 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 CLN8Q9UBY8 286 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 CYB5R1Q9UHQ9 305 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 SAMD4AQ9UPU9 718 aaKnown RBP3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 LRCH1Q9Y2L9 728 aa3.89□□□□□ -1.79
GTF3C3-208ENST00000455546 KIAA2026Q5HYC2 2103 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 CENPVL3A0A0U1RRI6 287 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 A0A1B0GW55 424 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 GGT3PA6NGU5 568 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 LRRC30A6NM36 301 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 CD300LBA8K4G0 201 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 M0R135 149 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 ZNF593O00488 134 aaPredicted RBP3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 BHLHE40O14503 412 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 TNFRSF13BO14836 293 aaPredicted RBP3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 ARPC3O15145 178 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 ADAM20O43506 726 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 GMNNO75496 209 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 GYPAP02724 150 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 TFF1P04155 84 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 DUX4L2P0CJ85 424 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 DUX4L3P0CJ86 424 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 DUX4L4P0CJ87 422 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 DUX4L5P0CJ88 424 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 DUX4L6P0CJ89 424 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 DUX4L7P0CJ90 424 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 IRF2P14316 349 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 PSMB10P40306 273 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 CD200P41217 278 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 MTNR1AP48039 350 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 GSSP48637 474 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 RAD23AP54725 363 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 UCP3P55916 312 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 DLX1P56177 255 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 TPTEP56180 551 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 SMIM11AP58511 58 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 KRTAP10-3P60369 221 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 GMFBP60983 142 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 ARF6P62330 175 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 DEFA6Q01524 100 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 PMS2P11Q13670 270 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 TAF13Q15543 124 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 OR8G1Q15617 311 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 ZNF181Q2M3W8 571 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 SLC36A3Q495N2 470 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 HSP90B2PQ58FF3 399 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 DMRTC1Q5HYR2 192 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 PGBD2Q6P3X8 592 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 DNM1P34Q6PK57 102 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 DUX4L9Q6RFH8 374 aaPredicted RBP3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 FIP1L1Q6UN15 594 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 DCDC5Q6ZRR9 648 aa3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 MRPL21Q7Z2W9 205 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-208ENST00000455546 DCXRQ7Z4W1 244 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms