RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 ACOX2Q99424 681 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 TBX5Q99593 518 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 SIGMAR1Q99720 223 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 NUDT9Q9BW91 350 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 PRO1933Q9H354 126 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZNF385DQ9H6B1 395 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 METTL17Q9H7H0 456 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 POLD4Q9HCU8 107 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 SLC7A10Q9NS82 523 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 C20orf141Q9NUB4 165 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 ASB6Q9NWX5 421 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 MED29Q9NX70 200 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 DUS2Q9NX74 493 aaKnown RBP4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 NLKQ9UBE8 527 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 PRSS50Q9UI38 385 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 PSORS1C1Q9UIG5 152 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 IKZF2Q9UKS7 526 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 RNF11Q9Y3C5 154 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 AK6Q9Y3D8 172 aaKnown RBP4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 COL18A1P39060 1754 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 UBR2Q8IWV8 1755 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 MYH3P11055 1940 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 MYH6P13533 1939 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 AKAP11Q9UKA4 1901 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 A0A1W2PRF3 423 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 A0A1W2PRM7 423 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 MYADML2A6NDP7 307 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 FAM90A10PA6NDY2 464 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZNF726A6NNF4 738 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 J3QLI3 93 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 MANBAO00462 879 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 CLDN5O00501 218 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 RBFOX2O43251 390 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 GNG7O60262 68 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 HSBP1O75506 76 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 SLC25A12O75746 678 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 C1RP00736 705 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 KLK1P06870 262 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 RHOCP08134 193 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 ADRA2AP08913 450 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 NMBP08949 121 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 ALDOCP09972 364 aaKnown RBP4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 RPS3P23396 243 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 CMPK1P30085 196 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 CDKN2BP42772 138 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 TNFRSF4P43489 277 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 RHOAP61586 193 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 EIF5AP63241 154 aaKnown RBP4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 CDK5Q00535 292 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 FKBP3Q00688 224 aaKnown RBP4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 RUNX1Q01196 453 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 DEFA5Q01523 94 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 ID2Q02363 134 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR2F1Q13607 317 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 HTR4Q13639 388 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 EIF2B1Q14232 305 aaKnown RBP4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 HERPUD1Q15011 391 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 EBPQ15125 230 aaKnown RBP4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZNF77Q15935 545 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 SRSF7Q16629 238 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 TTLL9Q3SXZ7 439 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 TMEM196Q5HYL7 178 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 NXNL2Q5VZ03 156 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 B3GNTL1Q67FW5 361 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 ENPP7Q6UWV6 458 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 DHRS13Q6UX07 377 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 PLXDC2Q6UX71 529 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 CEACAM20Q6UY09 585 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 FRRS1Q6ZNA5 592 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 GLT6D1Q7Z4J2 308 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 MDGA2Q7Z553 956 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 GOLGA7Q7Z5G4 137 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 CBR4Q8N4T8 237 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 NOXO1Q8NFA2 376 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR4S1Q8NGB4 309 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR52L1Q8NGH7 329 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR4A4PQ8NGN8 299 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR13G1Q8NGZ3 307 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR52I2Q8NH67 350 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR56B4Q8NH76 319 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 HAVCR2Q8TDQ0 301 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 Q8WTZ3 238 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 RNF138Q8WVD3 245 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 FAM151AQ8WW52 585 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 CAPNS2Q96L46 248 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 TEX37Q96LM6 180 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 GPR82Q96P67 336 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 P2RX4Q99571 388 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 COPS8Q99627 209 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 NRIP2Q9BQI9 281 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 LXNQ9BS40 222 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 MARVELD1Q9BSK0 173 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 FAAP24Q9BTP7 215 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 LINC00470Q9BZP3 86 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 CIPCQ9C0C6 399 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 CTDSP1Q9GZU7 261 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 CXorf36Q9H7Y0 433 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 NHEJ1Q9H9Q4 299 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 AMBNQ9NP70 447 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 RBFOX1Q9NWB1 397 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms