RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 GINS1Q14691 196 aa14.11□□□□□ -0.15
CPSF4-203ENST00000430038 GFOD2Q3B7J2 385 aa14.11□□□□□ -0.15
CPSF4-203ENST00000430038 TMEM236Q5W0B7 351 aa14.11□□□□□ -0.15
CPSF4-203ENST00000430038 PLBD1Q6P4A8 553 aa14.11□□□□□ -0.15
CPSF4-203ENST00000430038 ITPKCQ96DU7 683 aa14.11□□□□□ -0.15
CPSF4-203ENST00000430038 THTPAQ9BU02 230 aa14.11□□□□□ -0.15
CPSF4-203ENST00000430038 PDP1Q9P0J1 537 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-203ENST00000430038 KAAG1Q9UBP8 84 aa14.11□□□□□ -0.15
CPSF4-203ENST00000430038 PRR32B1ATL7 298 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 SRRM5B3KS81 715 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 CDIPTO14735 213 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 FAM107AO95990 144 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 IFNGP01579 166 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 MELTFP08582 738 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 POU1F1P28069 291 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 HSD11B1P28845 292 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 DDOSTP39656 456 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 SLC15A1P46059 708 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 KRTAP10-3P60369 221 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 CDK5Q00535 292 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 TIGD6Q17RP2 521 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 WDR38Q5JTN6 314 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 GPR157Q5UAW9 335 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 CPOQ8IVL8 374 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 PDZD9Q8IXQ8 264 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 PIP4P2Q8N4L2 257 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 FAM216BQ8N7L0 139 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 OR5T2Q8NGG2 359 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 OR8S1Q8NH09 359 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 OTOSQ8NHW6 89 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 TEX47Q8TBZ9 253 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 TLNRD1Q9H1K6 362 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 WDR13Q9H1Z4 485 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 TOR3AQ9H497 397 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 OPA3Q9H6K4 179 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 ZNF696Q9H7X3 374 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 C14orf119Q9NWQ9 140 aa14.1□□□□□ -0.15
CPSF4-203ENST00000430038 PRPF19Q9UMS4 504 aaKnown RBP14.1□□□□□ -0.15
CPSF4-203ENST00000430038 NOP16Q9Y3C1 178 aaKnown RBP14.1□□□□□ -0.15
CPSF4-203ENST00000430038 ANKRD30BLA7E2S9 258 aa14.09□□□□□ -0.15
CPSF4-203ENST00000430038 P2RY10O00398 339 aa14.09□□□□□ -0.15
CPSF4-203ENST00000430038 NDUFA2O43678 99 aa14.09□□□□□ -0.15
CPSF4-203ENST00000430038 SLC2A5P22732 501 aa14.09□□□□□ -0.15
CPSF4-203ENST00000430038 BLVRAP53004 296 aa14.09□□□□□ -0.15
CPSF4-203ENST00000430038 IL13RA1P78552 427 aa14.09□□□□□ -0.15
CPSF4-203ENST00000430038 DMRTC1Q5HYR2 192 aa14.09□□□□□ -0.15
CPSF4-203ENST00000430038 CD276Q5ZPR3 534 aa14.09□□□□□ -0.15
CPSF4-203ENST00000430038 FIP1L1Q6UN15 594 aaKnown RBP14.09□□□□□ -0.15
CPSF4-203ENST00000430038 LY6G5BQ8NDX9 201 aa14.09□□□□□ -0.15
CPSF4-203ENST00000430038 LHX4Q969G2 390 aa14.09□□□□□ -0.15
CPSF4-203ENST00000430038 ZDHHC16Q969W1 377 aa14.09□□□□□ -0.15
CPSF4-203ENST00000430038 RNPEPL1Q9HAU8 725 aa14.09□□□□□ -0.15
CPSF4-203ENST00000430038 C1RLQ9NZP8 487 aa14.09□□□□□ -0.15
CPSF4-203ENST00000430038 RPUSD1Q9UJJ7 312 aaKnown RBP14.09□□□□□ -0.15
CPSF4-203ENST00000430038 IGHV1-69DA0A0B4J2H0 117 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.08□□□□□ -0.16
CPSF4-203ENST00000430038 A0A0U1RQK1 487 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 ARRDC5A6NEK1 342 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 ZNF850A8MQ14 1090 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 IGHV1-69P01742 117 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 LIPFP07098 398 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 H2BFMP0C1H6 154 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 NAA10P41227 235 aaPredicted RBP14.08□□□□□ -0.16
CPSF4-203ENST00000430038 GMFBP60983 142 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 KCNJ8Q15842 424 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 RHOUQ7L0Q8 258 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 SHFQ7M4L6 423 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 KIR3DL3Q8N743 410 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 CCDC197Q8NCU1 140 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 THEM6Q8WUY1 208 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 HPSE2Q8WWQ2 592 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 ST8SIA4Q92187 359 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 RPL3LQ92901 407 aaKnown RBP14.08□□□□□ -0.16
CPSF4-203ENST00000430038 PPP1R14AQ96A00 147 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 PGAM5Q96HS1 289 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 C1orf21Q9H246 121 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 SEMA6AQ9H2E6 1030 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 SNTG1Q9NSN8 517 aa14.08□□□□□ -0.16
CPSF4-203ENST00000430038 POM121CA8CG34 1229 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 PRR23D1E9PI22 279 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-203ENST00000430038 PSMD9O00233 223 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 LYNP07948 512 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 PRR23D2P0DMB1 279 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-203ENST00000430038 OSMP13725 252 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 DCTDP32321 178 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 TGM4P49221 684 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 PRDX4Q13162 271 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 GALNT4Q8N4A0 578 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 Q8N7P7 452 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 PNLDC1Q8NA58 520 aaKnown RBP14.07□□□□□ -0.16
CPSF4-203ENST00000430038 OR8B12Q8NGG6 310 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 OR52H1Q8NGJ2 320 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 OR5P3Q8WZ94 311 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 PAPOLGQ9BWT3 736 aaKnown RBP14.07□□□□□ -0.16
CPSF4-203ENST00000430038 OR10A2Q9H208 303 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 CNTD2Q9H8S5 307 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 NOX4Q9NPH5 578 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 ACOXLQ9NUZ1 547 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 MMP24Q9Y5R2 645 aa14.07□□□□□ -0.16
CPSF4-203ENST00000430038 AQP12BA6NM10 295 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms