RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 ARHGAP24Q8N264 748 aa13.71□□□□□ -0.21
PTPRK-208ENST00000392449 FAM216BQ8N7L0 139 aa13.71□□□□□ -0.21
PTPRK-208ENST00000392449 SPERTQ8NA61 448 aa13.71□□□□□ -0.21
PTPRK-208ENST00000392449 OR1M1Q8NGA1 313 aa13.71□□□□□ -0.21
PTPRK-208ENST00000392449 LHX4Q969G2 390 aa13.71□□□□□ -0.21
PTPRK-208ENST00000392449 ASB9Q96DX5 294 aa13.71□□□□□ -0.21
PTPRK-208ENST00000392449 PAPOLGQ9BWT3 736 aaKnown RBP13.71□□□□□ -0.21
PTPRK-208ENST00000392449 CHIAQ9BZP6 476 aa13.71□□□□□ -0.21
PTPRK-208ENST00000392449 SIRPDQ9H106 197 aa13.71□□□□□ -0.21
PTPRK-208ENST00000392449 PRDM13Q9H4Q3 707 aa13.71□□□□□ -0.21
PTPRK-208ENST00000392449 KLHDC2Q9Y2U9 406 aa13.71□□□□□ -0.21
PTPRK-208ENST00000392449 ACOT8O14734 319 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 GLCEO94923 617 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 MELTFP08582 738 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 SELLP14151 372 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 CALB2P22676 271 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 ACKR3P25106 362 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 DDOSTP39656 456 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 DLX1P56177 255 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 RELBQ01201 579 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 WDR38Q5JTN6 314 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 METTL11BQ5VVY1 283 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 TEX36Q5VZQ5 186 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 WDR82Q6UXN9 313 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 CD300LDQ6UXZ3 194 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 Q6YL49 198 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 BBS1Q8NFJ9 593 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 PGAM5Q96HS1 289 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 LRGUKQ96M69 825 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 FGF23Q9GZV9 251 aaPredicted RBP13.7□□□□□ -0.22
PTPRK-208ENST00000392449 TOR3AQ9H497 397 aa13.7□□□□□ -0.22
PTPRK-208ENST00000392449 CMYA5Q8N3K9 4069 aa13.69□□□□□ -0.22
PTPRK-208ENST00000392449 P2RY10O00398 339 aa13.69□□□□□ -0.22
PTPRK-208ENST00000392449 CDIPTO14735 213 aa13.69□□□□□ -0.22
PTPRK-208ENST00000392449 H2BFMP0C1H6 154 aa13.69□□□□□ -0.22
PTPRK-208ENST00000392449 NAA10P41227 235 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-208ENST00000392449 BLVRAP53004 296 aa13.69□□□□□ -0.22
PTPRK-208ENST00000392449 GINS1Q14691 196 aa13.69□□□□□ -0.22
PTPRK-208ENST00000392449 PNLDC1Q8NA58 520 aaKnown RBP13.69□□□□□ -0.22
PTPRK-208ENST00000392449 OR5T2Q8NGG2 359 aa13.69□□□□□ -0.22
PTPRK-208ENST00000392449 CANT1Q8WVQ1 401 aa13.69□□□□□ -0.22
PTPRK-208ENST00000392449 LYZL4Q96KX0 146 aa13.69□□□□□ -0.22
PTPRK-208ENST00000392449 ZNF696Q9H7X3 374 aa13.69□□□□□ -0.22
PTPRK-208ENST00000392449 TRIM36Q9NQ86 728 aa13.69□□□□□ -0.22
PTPRK-208ENST00000392449 PDP1Q9P0J1 537 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-208ENST00000392449 DNAJB11Q9UBS4 358 aa13.69□□□□□ -0.22
PTPRK-208ENST00000392449 IGHV1-69DA0A0B4J2H0 117 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 A0A0U1RQK1 487 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 NDUFA2O43678 99 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 IGHV1-69P01742 117 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 AMY2BP19961 511 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 PRKACGP22612 351 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 HCCSP53701 268 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 MZT1Q08AG7 82 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 IKZF1Q13422 519 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 TMEM236Q5W0B7 351 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 KIR3DL3Q8N743 410 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 CCDC197Q8NCU1 140 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 OR52H1Q8NGJ2 320 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 THEM6Q8WUY1 208 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 GATAD2BQ8WXI9 593 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 RPL3LQ92901 407 aaKnown RBP13.68□□□□□ -0.22
PTPRK-208ENST00000392449 ITPKCQ96DU7 683 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 THTPAQ9BU02 230 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 WDR13Q9H1Z4 485 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 OR10A2Q9H208 303 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 SEMA6AQ9H2E6 1030 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 SNTG1Q9NSN8 517 aa13.68□□□□□ -0.22
PTPRK-208ENST00000392449 RPUSD1Q9UJJ7 312 aaKnown RBP13.68□□□□□ -0.22
PTPRK-208ENST00000392449 PRPF19Q9UMS4 504 aaKnown RBP13.68□□□□□ -0.22
PTPRK-208ENST00000392449 ZNF850A8MQ14 1090 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 PRR23D1E9PI22 279 aaPredicted RBP13.67□□□□□ -0.22
PTPRK-208ENST00000392449 LIPFP07098 398 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 LYNP07948 512 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 PRR23D2P0DMB1 279 aaPredicted RBP13.67□□□□□ -0.22
PTPRK-208ENST00000392449 GNALP38405 381 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 PRDX4Q13162 271 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 MICBQ29980 383 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 DMRTC1Q5HYR2 192 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 SHFQ7M4L6 423 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 VMO1Q7Z5L0 202 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 CPOQ8IVL8 374 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 OTOSQ8NHW6 89 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 RNPEPL1Q9HAU8 725 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 ACOXLQ9NUZ1 547 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 C1RLQ9NZP8 487 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 KIF17Q9P2E2 1029 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 ONECUT1Q9UBC0 465 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 KAAG1Q9UBP8 84 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 ARRDC5A6NEK1 342 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 POM121CA8CG34 1229 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 PSMD9O00233 223 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 GNGT2O14610 69 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 FAM107AO95990 144 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 IGHV4-59P01825 116 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 PAICSP22234 425 aaKnown RBP13.67□□□□□ -0.22
PTPRK-208ENST00000392449 RAG2P55895 527 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 OR8B12Q8NGG6 310 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 HPSE2Q8WWQ2 592 aa13.67□□□□□ -0.22
PTPRK-208ENST00000392449 TLNRD1Q9H1K6 362 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms