RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 ARHGEF39Q8N4T4 335 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 GLRX2Q9NS18 164 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 AMDHD2Q9Y303 409 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 XKRY2A2RUG3 117 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 MGMTP16455 207 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 GALNSP34059 522 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 RFX2P48378 723 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 TMEM268Q5VZI3 342 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 LRRC29Q8WV35 223 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 SNAPINO95295 136 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 PABPC1L2AQ5JQF8 200 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 RPL7L1Q6DKI1 246 aaKnown RBP13.34□□□□□ -0.27
LRRK1-201ENST00000388948 UBALD1Q8TB05 177 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 NRG4Q8WWG1 115 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 BAGE3Q86Y29 109 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 BAGE2Q86Y30 109 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 SFTPA2Q8IWL1 248 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 FCRL1Q96LA6 429 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 SAP30LQ9HAJ7 183 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 TJP1Q07157 1748 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 USP54Q70EL1 1684 aa13.34□□□□□ -0.27
LRRK1-201ENST00000388948 SEC14L6B5MCN3 397 aa13.33□□□□□ -0.27
LRRK1-201ENST00000388948 DEFB108AA8MXU0 73 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 CYTIPO60759 359 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 PRDM4Q9UKN5 801 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 PPP3CBP16298 524 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 ADRA2CP18825 462 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 APH1BQ8WW43 257 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 ERGIC1Q969X5 290 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 GPR78Q96P69 363 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 PKMYT1Q99640 499 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 NIPSNAP3BQ9BS92 247 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 PRDM7Q9NQW5 492 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 MYO5AQ9Y4I1 1855 aaKnown RBP13.33□□□□□ -0.28
LRRK1-201ENST00000388948 TRABD2BA6NFA1 517 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 LRRC3CA6NJW4 275 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 CLEC2LP0C7M8 214 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 ZBTB25P24278 435 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 PAQR6Q6TCH4 344 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 ALKAL2Q6UX46 152 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 CIB3Q96Q77 187 aaPredicted RBP13.33□□□□□ -0.28
LRRK1-201ENST00000388948 RSRP1Q9BUV0 290 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 SLA2Q9H6Q3 261 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 MED9Q9NWA0 146 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 RNF24Q9Y225 148 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 hADV38S2A0JD32 116 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 ZNF32P17041 273 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 ATF1P18846 271 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 ZNF774Q6NX45 483 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 OR13C8Q8NGS7 320 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 OR8U1Q8NH10 309 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 ZNF331Q9NQX6 463 aaPredicted RBP13.33□□□□□ -0.28
LRRK1-201ENST00000388948 CLEC5AQ9NY25 188 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 CHEK1O14757 476 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 XRCC3O43542 346 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 PCMT1P22061 227 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 RHOBP62745 196 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 PTPMT1Q8WUK0 201 aaPredicted RBP13.33□□□□□ -0.28
LRRK1-201ENST00000388948 ISL2Q96A47 359 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 PIK3IP1Q96FE7 263 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 TMEM56Q96MV1 263 aa13.33□□□□□ -0.28
LRRK1-201ENST00000388948 TRAV38-1A0A0B4J264 116 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 NGFP01138 241 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 OR5D13Q8NGL4 314 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 KIAA1217Q5T5P2 1943 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 H3BMH7 237 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 CCSO14618 274 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 ASCL1P50553 236 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 LSAMPQ13449 338 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 SOHLH1Q5JUK2 328 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 RFESDQ8TAC1 157 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 ZFAND2BQ8WV99 257 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 ZNRF4Q8WWF5 429 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 CMBLQ96DG6 245 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 EML2O95834 649 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 NPEPL1Q8NDH3 523 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 ZDBF2Q9HCK1 2354 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 C7orf72A4D263 438 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 ACTL6AO96019 429 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 TCRBP04435 133 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 CLEC2AQ6UVW9 174 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 TMEM179BQ7Z7N9 219 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 NANOGP1Q8N7R0 232 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 OR5B3Q8NH48 314 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 C19orf43Q9BQ61 176 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 OR4A8P0C604 315 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 POU3F3P20264 500 aaPredicted RBP13.32□□□□□ -0.28
LRRK1-201ENST00000388948 RHOUQ7L0Q8 258 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 CACFD1Q9UGQ2 172 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 KCNMB2Q9Y691 235 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 FAM186AA6NE01 2351 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 TMEM200CA6NKL6 621 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 PP6455Q8WZ26 134 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 CCDC88CQ9P219 2028 aa13.32□□□□□ -0.28
LRRK1-201ENST00000388948 ONECUT2O95948 504 aa13.31□□□□□ -0.28
LRRK1-201ENST00000388948 IL5P05113 134 aa13.31□□□□□ -0.28
LRRK1-201ENST00000388948 METTL15P1P0C7V9 234 aa13.31□□□□□ -0.28
LRRK1-201ENST00000388948 THBS4P35443 961 aa13.31□□□□□ -0.28
LRRK1-201ENST00000388948 TMEM41BQ5BJD5 291 aa13.31□□□□□ -0.28
LRRK1-201ENST00000388948 ABI3BPQ7Z7G0 1075 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms