RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 MPC1Q9Y5U8 109 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 TRAV20A0A0B4J274 112 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 ZNF816-ZNF321PA0A0X1KG74 233 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 hCG_1807616A0A1W2PRN6 198 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 DAPL1A0PJW8 107 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 RPP14O95059 124 aaKnown RBP16.16■□□□□ 0.18
SYNE4-202ENST00000340477 GRPP07492 148 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 MFGE8Q08431 387 aaPredicted RBP16.16■□□□□ 0.18
SYNE4-202ENST00000340477 ZMYND11Q15326 602 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 TTC23Q5W5X9 447 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 LPCAT4Q643R3 524 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 SETD9Q8NE22 299 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 SEMA6DQ8NFY4 1073 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 OR51E1Q8TCB6 317 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 FAM71F1Q96KD3 344 aaPredicted RBP16.16■□□□□ 0.18
SYNE4-202ENST00000340477 GPR84Q9NQS5 396 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 RNF7Q9UBF6 113 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 GNG8Q9UK08 70 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 RHBDD3Q9Y3P4 386 aa16.16■□□□□ 0.18
SYNE4-202ENST00000340477 PPIAL4EA0A075B759 164 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 FAM157AC9JC47 383 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 PPIAL4DF5H284 164 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 FAM20BO75063 409 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 CST4P01036 141 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 PPIAL4FP0DN26 164 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 HOXB4P17483 251 aaPredicted RBP16.15■□□□□ 0.18
SYNE4-202ENST00000340477 ACTA2P62736 377 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 ACTG2P63267 376 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 ZNF91Q05481 1191 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 RIPPLY1Q0D2K3 151 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 PRDX4Q13162 271 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 KCNJ8Q15842 424 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 SSX6Q7RTT6 188 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 LRRC28Q86X40 367 aaPredicted RBP16.15■□□□□ 0.18
SYNE4-202ENST00000340477 ZDHHC23Q8IYP9 409 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 RHOXF1Q8NHV9 184 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 PIGCQ92535 297 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 TMEM186Q96B77 213 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 LYZL4Q96KX0 146 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 TRIM36Q9NQ86 728 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 C1orf123Q9NWV4 160 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 RPL36Q9Y3U8 105 aaKnown RBP16.15■□□□□ 0.18
SYNE4-202ENST00000340477 PPIAL4AQ9Y536 164 aa16.15■□□□□ 0.18
SYNE4-202ENST00000340477 ZNF850A8MQ14 1090 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 MAGEB4O15481 346 aaPredicted RBP16.14■□□□□ 0.17
SYNE4-202ENST00000340477 DHRS3O75911 302 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 PTBP3O95758 552 aaKnown RBP16.14■□□□□ 0.17
SYNE4-202ENST00000340477 FADS2O95864 444 aaKnown RBP16.14■□□□□ 0.17
SYNE4-202ENST00000340477 DBTP11182 482 aaKnown RBP16.14■□□□□ 0.17
SYNE4-202ENST00000340477 CPT2P23786 658 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 ACKR3P25106 362 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 MPPED2Q15777 294 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 ZBTB37Q5TC79 503 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 LIPNQ5VXI9 398 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 KCTD8Q6ZWB6 473 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 KCTD20Q7Z5Y7 419 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 ELMOD2Q8IZ81 293 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 ACBD7Q8N6N7 88 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 POM121Q96HA1 1249 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 ADI1Q9BV57 179 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 HIF1ANQ9NWT6 349 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 ENPP5Q9UJA9 477 aa16.14■□□□□ 0.17
SYNE4-202ENST00000340477 A0A1B0GVI7 797 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 TMEM210A6NLX4 147 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 SRSF10O75494 262 aaKnown RBP16.13■□□□□ 0.17
SYNE4-202ENST00000340477 FOXH1O75593 365 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 FSTL3O95633 263 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 PNPP00491 289 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 TTRP02766 147 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 RPS2P15880 293 aaKnown RBP16.13■□□□□ 0.17
SYNE4-202ENST00000340477 GABRB1P18505 474 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 ELF3P78545 371 aaPredicted RBP16.13■□□□□ 0.17
SYNE4-202ENST00000340477 RAB40BQ12829 278 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 CR1LQ2VPA4 569 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 KLHL22Q53GT1 634 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 OGFRL1Q5TC84 451 aaPredicted RBP16.13■□□□□ 0.17
SYNE4-202ENST00000340477 NLRC3Q7RTR2 1065 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 DHRSXQ8N5I4 330 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 BOLLQ8N9W6 283 aaKnown RBP16.13■□□□□ 0.17
SYNE4-202ENST00000340477 LGALS12Q96DT0 336 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 PLEKHA1Q9HB21 404 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 PATZ1Q9HBE1 687 aaKnown RBP16.13■□□□□ 0.17
SYNE4-202ENST00000340477 G6PC2Q9NQR9 355 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 AASSQ9UDR5 926 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 PIGLQ9Y2B2 252 aa16.13■□□□□ 0.17
SYNE4-202ENST00000340477 NAV3Q8IVL0 2385 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 A0A0G2JMP0 313 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 A0A0X1KG70 313 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 IRGMA1A4Y4 181 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 H0YHG0 523 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 CASQ2O14958 399 aaPredicted RBP16.12■□□□□ 0.17
SYNE4-202ENST00000340477 ZNF205O95201 554 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 ZNF85Q03923 595 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 HNRNPA0Q13151 305 aaKnown RBP16.12■□□□□ 0.17
SYNE4-202ENST00000340477 IL18R1Q13478 541 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 TP53I3Q53FA7 332 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 ESCO2Q56NI9 601 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 FAM120AOSQ5T036 256 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 ZNF691Q5VV52 312 aa16.12■□□□□ 0.17
SYNE4-202ENST00000340477 DOK3Q7L591 496 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms