RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 TBC1D3HP0C7X1 549 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PCSK6P29122 969 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 HFEQ30201 348 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 OR4C11Q6IEV9 310 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 TBC1D3CQ6IPX1 549 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 REM2Q8IYK8 340 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 TBC1D3Q8IZP1 549 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 DMBX1Q8NFW5 382 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 GOT1L1Q8NHS2 421 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PTX4Q96A99 478 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PCED1BQ96HM7 432 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 MRGPRX1Q96LB2 322 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 HINT2Q9BX68 163 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 SH2D2AQ9NP31 389 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 A0A1B0GW15 77 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 CRYM-AS1A6NIL9 109 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 C9JVG2 144 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 CDS2O95674 445 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 LIPNQ5VXI9 398 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 OR9Q2Q8NGE9 314 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 HHIPL1Q96JK4 782 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 SMOQ99835 787 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 CPPED1Q9BRF8 314 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 C19orf24Q9BVV8 132 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PAM16Q9Y3D7 125 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ASB1Q9Y576 335 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 CDK2AP1O14519 115 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 HLA-DRB1P01911 266 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 TAF10Q12962 218 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PLPP4Q5VZY2 271 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 JMJD6Q6NYC1 403 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF100Q8IYN0 542 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 OR8B3Q8NGG8 313 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 VN1R17PQ8TDU5 208 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 NPY6RQ99463 290 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 OPN3Q9H1Y3 402 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 IKZF5Q9H5V7 419 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 AP5S1Q9NUS5 200 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PRSS50Q9UI38 385 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 C7orf72A4D263 438 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 MPC2O95563 127 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ORM2P19652 201 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 BCL3P20749 454 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 TBPL1P62380 186 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 TWIST1Q15672 202 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 DOK3Q7L591 496 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 KRTCAP2Q8N6L1 136 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 MRGPRDQ8TDS7 321 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ALKBH7Q9BT30 221 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 SMIM3Q9BZL3 60 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 CALHM2Q9HA72 323 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 TMEM38BQ9NVV0 291 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PPT2Q9UMR5 302 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 STARD10Q9Y365 291 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PPP1CAP62136 330 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ARG2P78540 354 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PLCXD2Q0VAA5 305 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 HMGCLL1Q8TB92 370 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 GSTO2Q9H4Y5 243 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 A0A087WWC5 75 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 A0A1W2PPC4 97 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ZAR1LA6NP61 321 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF749O43361 778 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 GDF10P55107 478 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ERV3-1Q14264 604 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PLCXD3Q63HM9 321 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PSAPL1Q6NUJ1 521 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 BHLHA15Q7RTS1 189 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 WDR20Q8TBZ3 569 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 CD99L2Q8TCZ2 262 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 IMMP2LQ96T52 175 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 S1PR3Q99500 378 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 GGACTQ9BVM4 153 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 FNDC1Q4ZHG4 1894 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 SORBS2O94875 1100 aaKnown RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 CRYBA1P05813 215 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 HTR1DP28221 377 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 AKR1C3P42330 323 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 CDKN2AP42771 156 aaKnown RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 GDF5P43026 501 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PRRX1P54821 245 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 LYSMD4Q5XG99 296 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PRSS54Q6PEW0 395 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 HTR3DQ70Z44 454 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 OR1L4Q8NGR5 311 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ORAOV1Q8WV07 137 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF707Q96C28 371 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 TAAR6Q96RI8 345 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ABHD1Q96SE0 405 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 MIEN1Q9BRT3 115 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 RBM38Q9H0Z9 239 aaKnown RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 SEBOXQ9HB31 216 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 SPANXB1Q9NS25 103 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 FOXJ2Q9P0K8 574 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 FOXD2O60548 495 aaPredicted RBP4.4□□□□□ -1.7
CSMD3-201ENST00000297405 DEFA4P12838 97 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 ELAVL4P26378 380 aaKnown RBP4.4□□□□□ -1.7
CSMD3-201ENST00000297405 BLVRBP30043 206 aaPredicted RBP4.4□□□□□ -1.7
CSMD3-201ENST00000297405 SRSF5Q13243 272 aaKnown RBP4.4□□□□□ -1.7
CSMD3-201ENST00000297405 DHRS2Q13268 280 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms