RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 RAC2P15153 192 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 THBS4P35443 961 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 DDOSTP39656 456 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 NKX6-1P78426 367 aaPredicted RBP16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 SNTB2Q13425 540 aaKnown RBP16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 NCMAPQ5T1S8 102 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 ZBTB37Q5TC79 503 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 LAX1Q8IWV1 398 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 PIAS4Q8N2W9 510 aaPredicted RBP16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 KLF14Q8TD94 323 aaPredicted RBP16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 ACOT12Q8WYK0 555 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 PP6455Q8WZ26 134 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 CMBLQ96DG6 245 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 RADILQ96JH8 1075 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 WDFY2Q96P53 400 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 CMAHPQ9Y471 501 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 V9GY05 133 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 ADGRG4Q8IZF6 3080 aa16.24■□□□□ 0.19
PDLIM3-202ENST00000284770 RGS5O15539 181 aa16.24■□□□□ 0.19
PDLIM3-202ENST00000284770 MAS1P04201 325 aa16.24■□□□□ 0.19
PDLIM3-202ENST00000284770 GLRXP35754 106 aa16.24■□□□□ 0.19
PDLIM3-202ENST00000284770 ETV6P41212 452 aa16.24■□□□□ 0.19
PDLIM3-202ENST00000284770 ZNF529Q6P280 563 aa16.24■□□□□ 0.19
PDLIM3-202ENST00000284770 CCDC190Q86UF4 302 aa16.24■□□□□ 0.19
PDLIM3-202ENST00000284770 OR56B2PQ8NGI1 322 aa16.24■□□□□ 0.19
PDLIM3-202ENST00000284770 HMG20AQ9NP66 347 aa16.24■□□□□ 0.19
PDLIM3-202ENST00000284770 ABCB9Q9NP78 766 aa16.24■□□□□ 0.19
PDLIM3-202ENST00000284770 IFITM5A6NNB3 132 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 CD300LBA8K4G0 201 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 AIPO00170 330 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 TNFSF8P32971 234 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 ZNF718Q3SXZ3 478 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 DDI2Q5TDH0 399 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 DNAAF1Q8NEP3 725 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 CSNK2A3Q8NEV1 391 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 NUP37Q8NFH4 326 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 HAVCR1Q96D42 359 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 PLPPR2Q96GM1 343 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 CHST5Q9GZS9 411 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 COMMD3Q9UBI1 195 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 ZNF816-ZNF321PA0A0X1KG74 233 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 CD37P11049 281 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 PPP3R1P63098 170 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 PSG7Q13046 419 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 DYNC1I2Q13409 638 aaKnown RBP16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 BEX5Q5H9J7 111 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 MBNL2Q5VZF2 373 aaKnown RBP16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 TMEM42Q69YG0 159 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 OR2T2Q6IF00 324 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 RGS7BPQ6MZT1 257 aaPredicted RBP16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 SLC22A25Q6T423 547 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 UTS2BQ765I0 119 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 KRT74Q7RTS7 529 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 OR1M1Q8NGA1 313 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 OR51A2Q8NGJ7 313 aa16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 WDR12Q9GZL7 423 aaKnown RBP16.23■□□□□ 0.19
PDLIM3-202ENST00000284770 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 ANXA2P2A6NMY6 339 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 TMEM127O75204 238 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 RNF224P0DH78 156 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 SELEP16581 610 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 RAB3AP20336 220 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 CFPP27918 469 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 MPV17P39210 176 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 KIR2DL3P43628 341 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 PSMD7P51665 324 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 RPS23P62266 143 aaKnown RBP16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 ZNF846Q147U1 533 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 CLVS2Q5SYC1 327 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 MZT2AQ6P582 158 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 FTMTQ8N4E7 242 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 OR13C9Q8NGT0 318 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 CRIM1Q9NZV1 1036 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 RHBDD3Q9Y3P4 386 aa16.22■□□□□ 0.19
PDLIM3-202ENST00000284770 HEATR1Q9H583 2144 aaKnown RBP16.21■□□□□ 0.19
PDLIM3-202ENST00000284770 C19orf84I3L1E1 186 aa16.21■□□□□ 0.19
PDLIM3-202ENST00000284770 SULT1B1O43704 296 aa16.21■□□□□ 0.19
PDLIM3-202ENST00000284770 GMDSO60547 372 aa16.21■□□□□ 0.19
PDLIM3-202ENST00000284770 ALX3O95076 343 aa16.21■□□□□ 0.19
PDLIM3-202ENST00000284770 PAHP00439 452 aa16.21■□□□□ 0.19
PDLIM3-202ENST00000284770 IGFBP2P18065 325 aa16.21■□□□□ 0.19
PDLIM3-202ENST00000284770 GCH1P30793 250 aa16.21■□□□□ 0.19
PDLIM3-202ENST00000284770 FABP6P51161 128 aa16.21■□□□□ 0.19
PDLIM3-202ENST00000284770 SRSF1Q07955 248 aaKnown RBP eCLIP16.21■□□□□ 0.19
PDLIM3-202ENST00000284770 TMEM171Q8WVE6 324 aa16.21■□□□□ 0.19
PDLIM3-202ENST00000284770 ABRACLQ9P1F3 81 aa16.21■□□□□ 0.19
PDLIM3-202ENST00000284770 KCNN3Q9UGI6 736 aa16.21■□□□□ 0.19
PDLIM3-202ENST00000284770 A0A0B4J203 849 aa16.21■□□□□ 0.18
PDLIM3-202ENST00000284770 MEGF11A6BM72 1044 aa16.21■□□□□ 0.18
PDLIM3-202ENST00000284770 HPGDSO60760 199 aa16.21■□□□□ 0.18
PDLIM3-202ENST00000284770 CST4P01036 141 aa16.21■□□□□ 0.18
PDLIM3-202ENST00000284770 NRASP01111 189 aa16.21■□□□□ 0.18
PDLIM3-202ENST00000284770 CD3EP07766 207 aa16.21■□□□□ 0.18
PDLIM3-202ENST00000284770 ZNF250P15622 560 aa16.21■□□□□ 0.18
PDLIM3-202ENST00000284770 UBE2V2Q15819 145 aa16.21■□□□□ 0.18
PDLIM3-202ENST00000284770 HES5Q5TA89 166 aa16.21■□□□□ 0.18
PDLIM3-202ENST00000284770 LYPD6Q86Y78 171 aa16.21■□□□□ 0.18
PDLIM3-202ENST00000284770 PIGTQ969N2 578 aa16.21■□□□□ 0.18
PDLIM3-202ENST00000284770 TMEM138Q9NPI0 162 aa16.21■□□□□ 0.18
PDLIM3-202ENST00000284770 IGKV1-9A0A0C4DH69 117 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms