RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 PDZD11Q5EBL8 140 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 RPS19BP1Q86WX3 136 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 OR5AP2Q8NGF4 316 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 A0A0G2JK05 382 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 CYR61O00622 381 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 KLF4O43474 513 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 S100PP25815 95 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 CAPZBP47756 277 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 OR2B8PP59922 312 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ZP1P60852 638 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 RAB32Q13637 225 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 LINC00696Q6ZRV3 163 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 PPP1R3BQ86XI6 285 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 EXD3Q8N9H8 876 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 SGK3Q96BR1 496 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 PILRAQ9UKJ1 303 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 RCL1Q9Y2P8 373 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 TMEM184BQ9Y519 407 aaPredicted RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 A0A0U1RQK1 487 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 H0YIG0 161 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF205O95201 554 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 SLC34A2O95436 690 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 UBE2NP61088 152 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 TMPPEQ6ZT21 453 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ATG4DQ86TL0 474 aaPredicted RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 OR5M9Q8NGP3 310 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 OR1L3Q8NH93 324 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 KIF26AQ9ULI4 1882 aaPredicted RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ENPP1P22413 925 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 OR3A4PP47883 348 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ASCL1P50553 236 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF684Q5T5D7 378 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 FAM199XQ6PEV8 388 aaPredicted RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 BHLHE23Q8NDY6 225 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 OR13C8Q8NGS7 320 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 UBALD1Q8TB05 177 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 SLC25A31Q9H0C2 315 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 KLF15Q9UIH9 416 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 GPR160Q9UJ42 338 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 H3BMH7 237 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 RER1O15258 196 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 HYAL1Q12794 435 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 TESK1Q15569 626 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 C4orf17Q53FE4 359 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 THEM4Q5T1C6 240 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 DOK3Q7L591 496 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 WDSUB1Q8N9V3 476 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 RXFP4Q8TDU9 374 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 SFT2D1Q8WV19 159 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 SSX3Q99909 188 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 FN3KRPQ9HA64 309 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 A0A096LPE4 126 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 A0A1W2PPZ6 126 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 CEBPZOSA8MTT3 80 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 HOXC12P31275 282 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 SSR4P51571 173 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 PIGPP57054 158 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 PSG6Q00889 435 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 TMEM268Q5VZI3 342 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 LGI3Q8N145 548 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 OR52H1Q8NGJ2 320 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 AKR1E2Q96JD6 320 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 WIF1Q9Y5W5 379 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 FRG2CA6NGY1 282 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 UMAD1C9J7I0 102 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 GPR31O00270 319 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 CST7O76096 145 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ABCD3P28288 659 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 SLC22A25Q6T423 547 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 OPN5Q6U736 354 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 C5orf46Q6UWT4 87 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 UNQ9370/PRO34162Q6UXP9 181 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ANKUB1A6NFN9 424 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 TNFSF14O43557 240 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 TBX6O95947 436 aaPredicted RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 NQO2P16083 231 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 CXCL12P48061 93 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 RPS15P62841 145 aaKnown RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 C2orf68Q2NKX9 166 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 TMEM92Q6UXU6 159 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 TMEM182Q6ZP80 229 aaPredicted RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 OR10G3Q8NGC4 313 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 CPNE4Q96A23 557 aaPredicted RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 NIPSNAP3BQ9BS92 247 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF275Q9NSD4 429 aaPredicted RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 SHEQ5VZ18 495 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 SLC25A26Q70HW3 274 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF808Q8N4W9 903 aaPredicted RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 EMG1Q92979 244 aaKnown RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 TMPRSS13Q9BYE2 586 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 VN1R1Q9GZP7 353 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 CNTD2Q9H8S5 307 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 B4GALT7Q9UBV7 327 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ABHD16AO95870 558 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 PNPP00491 289 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 IL9P15248 144 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 GDF1P27539 372 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 RAB11AP62491 216 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 MRGPREQ86SM8 312 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 CMTM1Q8IZ96 169 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms