RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CHRNDQ07001 517 aa19.71■□□□□ 0.75
PHGDH-216ENST00000641375 SCARF1Q14162 830 aa19.71■□□□□ 0.75
PHGDH-216ENST00000641375 C3orf67Q6ZVT6 689 aa19.71■□□□□ 0.75
PHGDH-216ENST00000641375 TXNRD1Q16881 649 aa19.71■□□□□ 0.75
PHGDH-216ENST00000641375 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.71■□□□□ 0.751e-14■□□□□ 11
PHGDH-216ENST00000641375 SEC62Q99442 399 aaKnown RBP19.7■□□□□ 0.74
PHGDH-216ENST00000641375 A0A1B0GUL6 1792 aa19.7■□□□□ 0.74
PHGDH-216ENST00000641375 PLSCR1O15162 318 aa19.7■□□□□ 0.74
PHGDH-216ENST00000641375 CWC22Q9HCG8 908 aaKnown RBP19.7■□□□□ 0.74
PHGDH-216ENST00000641375 U3KPZ7 1027 aaPredicted RBP19.7■□□□□ 0.74
PHGDH-216ENST00000641375 TAF1P21675 1872 aa19.69■□□□□ 0.74
PHGDH-216ENST00000641375 SLC27A2O14975 620 aa19.69■□□□□ 0.74
PHGDH-216ENST00000641375 CASTP20810 708 aaKnown RBP19.69■□□□□ 0.74
PHGDH-216ENST00000641375 PSMA5P28066 241 aa19.69■□□□□ 0.74
PHGDH-216ENST00000641375 PHKA1P46020 1223 aa19.69■□□□□ 0.74
PHGDH-216ENST00000641375 NFIXQ14938 502 aa19.69■□□□□ 0.74
PHGDH-216ENST00000641375 ZSCAN25Q6NSZ9 544 aa19.69■□□□□ 0.74
PHGDH-216ENST00000641375 TMX3Q96JJ7 454 aa19.69■□□□□ 0.74
PHGDH-216ENST00000641375 TSGA10IPQ3SY00 556 aa19.68■□□□□ 0.74
PHGDH-216ENST00000641375 JAKMIP1Q96N16 626 aaKnown RBP19.68■□□□□ 0.74
PHGDH-216ENST00000641375 FOXD4L1Q9NU39 408 aa19.68■□□□□ 0.74
PHGDH-216ENST00000641375 CHGBP05060 677 aa19.68■□□□□ 0.74
PHGDH-216ENST00000641375 DSCC1Q9BVC3 393 aa19.68■□□□□ 0.74
PHGDH-216ENST00000641375 ZSWIM6Q9HCJ5 1215 aa19.68■□□□□ 0.74
PHGDH-216ENST00000641375 CYP46A1Q9Y6A2 500 aa19.68■□□□□ 0.74
PHGDH-216ENST00000641375 COL4A1P02462 1669 aa19.67■□□□□ 0.74
PHGDH-216ENST00000641375 PI16Q6UXB8 463 aa19.67■□□□□ 0.74
PHGDH-216ENST00000641375 CCDC129Q6ZRS4 1044 aa19.67■□□□□ 0.74
PHGDH-216ENST00000641375 CNBD1Q8NA66 436 aa19.67■□□□□ 0.74
PHGDH-216ENST00000641375 TTC14Q96N46 770 aa19.67■□□□□ 0.74
PHGDH-216ENST00000641375 GYS1P13807 737 aa19.67■□□□□ 0.74
PHGDH-216ENST00000641375 RPS8P62241 208 aaKnown RBP19.67■□□□□ 0.74
PHGDH-216ENST00000641375 UBE4AQ14139 1066 aa19.67■□□□□ 0.74
PHGDH-216ENST00000641375 KRT32Q14532 448 aa19.67■□□□□ 0.74
PHGDH-216ENST00000641375 PROM2Q8N271 834 aa19.67■□□□□ 0.74
PHGDH-216ENST00000641375 MAST3O60307 1309 aa19.66■□□□□ 0.74
PHGDH-216ENST00000641375 CYP2E1P05181 493 aaPredicted RBP19.66■□□□□ 0.74
PHGDH-216ENST00000641375 ADCK5Q3MIX3 580 aa19.66■□□□□ 0.74
PHGDH-216ENST00000641375 VPS53Q5VIR6 699 aa19.66■□□□□ 0.74
PHGDH-216ENST00000641375 RUFY3Q7L099 469 aa19.66■□□□□ 0.74
PHGDH-216ENST00000641375 CELF1Q92879 486 aaKnown RBP19.66■□□□□ 0.74
PHGDH-216ENST00000641375 RPAP1Q9BWH6 1393 aaPredicted RBP19.66■□□□□ 0.74
PHGDH-216ENST00000641375 FRAT2O75474 233 aaPredicted RBP19.66■□□□□ 0.74
PHGDH-216ENST00000641375 SPATA5Q8NB90 893 aa19.66■□□□□ 0.74
PHGDH-216ENST00000641375 APPBP2Q92624 585 aa19.66■□□□□ 0.74
PHGDH-216ENST00000641375 INTS4Q96HW7 963 aaKnown RBP19.66■□□□□ 0.74
PHGDH-216ENST00000641375 MINPP1Q9UNW1 487 aa19.66■□□□□ 0.74
PHGDH-216ENST00000641375 CUL4AQ13619 759 aa19.65■□□□□ 0.74
PHGDH-216ENST00000641375 WASHC4Q2M389 1173 aa19.65■□□□□ 0.74
PHGDH-216ENST00000641375 APBA3O96018 575 aa19.64■□□□□ 0.74
PHGDH-216ENST00000641375 OSBP2Q969R2 916 aa19.64■□□□□ 0.74
PHGDH-216ENST00000641375 TNRC6CQ9HCJ0 1690 aaKnown RBP19.64■□□□□ 0.73
PHGDH-216ENST00000641375 SNAP23O00161 211 aa19.64■□□□□ 0.73
PHGDH-216ENST00000641375 RAB3GAP1Q15042 981 aa19.64■□□□□ 0.73
PHGDH-216ENST00000641375 PDRG1Q9NUG6 133 aa19.64■□□□□ 0.73
PHGDH-216ENST00000641375 DOCK2Q92608 1830 aa19.63■□□□□ 0.73
PHGDH-216ENST00000641375 HSPD1P10809 573 aaKnown RBP19.63■□□□□ 0.73
PHGDH-216ENST00000641375 AK2P54819 239 aa19.63■□□□□ 0.73
PHGDH-216ENST00000641375 RASGRF1Q13972 1273 aa19.63■□□□□ 0.73
PHGDH-216ENST00000641375 SLFNL1Q499Z3 407 aa19.63■□□□□ 0.73
PHGDH-216ENST00000641375 ANKRD2Q9GZV1 360 aa19.63■□□□□ 0.73
PHGDH-216ENST00000641375 LIMCH1Q9UPQ0 1083 aa19.63■□□□□ 0.73
PHGDH-216ENST00000641375 MYO5AQ9Y4I1 1855 aaKnown RBP19.63■□□□□ 0.73
PHGDH-216ENST00000641375 M0R2C6 588 aa19.63■□□□□ 0.73
PHGDH-216ENST00000641375 ADD2P35612 726 aa19.63■□□□□ 0.73
PHGDH-216ENST00000641375 NUCB2P80303 420 aa19.63■□□□□ 0.73
PHGDH-216ENST00000641375 UBE3CQ15386 1083 aa19.63■□□□□ 0.73
PHGDH-216ENST00000641375 SLC9C2Q5TAH2 1124 aa19.63■□□□□ 0.73
PHGDH-216ENST00000641375 CCDC24Q8N4L8 307 aa19.63■□□□□ 0.73
PHGDH-216ENST00000641375 GNL3LQ9NVN8 582 aaKnown RBP19.63■□□□□ 0.73
PHGDH-216ENST00000641375 TM4SF1P30408 202 aa19.62■□□□□ 0.73
PHGDH-216ENST00000641375 BCAMP50895 628 aa19.62■□□□□ 0.73
PHGDH-216ENST00000641375 ST5P78524 1137 aa19.62■□□□□ 0.73
PHGDH-216ENST00000641375 BLOC1S2Q6QNY1 142 aa19.62■□□□□ 0.73
PHGDH-216ENST00000641375 NOL8Q76FK4 1167 aaKnown RBP19.62■□□□□ 0.73
PHGDH-216ENST00000641375 IDH1O75874 414 aaKnown RBP19.61■□□□□ 0.73
PHGDH-216ENST00000641375 CAVIN4Q5BKX8 364 aa19.61■□□□□ 0.73
PHGDH-216ENST00000641375 PRR5LQ6MZQ0 368 aa19.61■□□□□ 0.73
PHGDH-216ENST00000641375 PIH1D3Q9NQM4 214 aaKnown RBP19.61■□□□□ 0.73
PHGDH-216ENST00000641375 TFCP2L1Q9NZI6 479 aa19.61■□□□□ 0.73
PHGDH-216ENST00000641375 RGPD3A6NKT7 1758 aaPredicted RBP19.61■□□□□ 0.73
PHGDH-216ENST00000641375 RGPD4Q7Z3J3 1758 aa19.61■□□□□ 0.73
PHGDH-216ENST00000641375 SERPINB2P05120 415 aa19.61■□□□□ 0.73
PHGDH-216ENST00000641375 CYP21A2P08686 494 aa19.61■□□□□ 0.73
PHGDH-216ENST00000641375 ALDH8A1Q9H2A2 487 aaPredicted RBP19.61■□□□□ 0.73
PHGDH-216ENST00000641375 ZNF804BA4D1E1 1349 aa19.61■□□□□ 0.73
PHGDH-216ENST00000641375 MAP3K12Q12852 859 aa19.6■□□□□ 0.73
PHGDH-216ENST00000641375 ANKRD1Q15327 319 aa19.6■□□□□ 0.73
PHGDH-216ENST00000641375 ZGPATQ8N5A5 531 aaKnown RBP19.6■□□□□ 0.73
PHGDH-216ENST00000641375 CTNNA3Q9UI47 895 aa19.6■□□□□ 0.73
PHGDH-216ENST00000641375 CPA1P15085 419 aa19.6■□□□□ 0.73
PHGDH-216ENST00000641375 ZSCAN31Q96LW9 406 aaPredicted RBP19.6■□□□□ 0.73
PHGDH-216ENST00000641375 PUS7LQ9H0K6 701 aaKnown RBP19.6■□□□□ 0.73
PHGDH-216ENST00000641375 RPS6KB1P23443 525 aa19.59■□□□□ 0.73
PHGDH-216ENST00000641375 FLAD1Q8NFF5 587 aa19.59■□□□□ 0.73
PHGDH-216ENST00000641375 NEK1Q96PY6 1258 aa19.59■□□□□ 0.73
PHGDH-216ENST00000641375 TNS1Q9HBL0 1735 aaKnown RBP19.59■□□□□ 0.73
PHGDH-216ENST00000641375 HMGB1P09429 215 aaKnown RBP19.59■□□□□ 0.73
PHGDH-216ENST00000641375 PDE6AP16499 860 aa19.59■□□□□ 0.73
PHGDH-216ENST00000641375 GRAPQ13588 217 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms