RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CENPHQ9H3R5 247 aa16.58■□□□□ 0.25
SCARB2-216ENST00000639300 PRR36Q9H6K5 1346 aa16.58■□□□□ 0.24
SCARB2-216ENST00000639300 CRNKL1Q9BZJ0 848 aaKnown RBP16.58■□□□□ 0.24
SCARB2-216ENST00000639300 CNNM2Q9H8M5 875 aa16.58■□□□□ 0.24
SCARB2-216ENST00000639300 DYNC1I1O14576 645 aa16.58■□□□□ 0.24
SCARB2-216ENST00000639300 N4BP3O15049 544 aa16.58■□□□□ 0.24
SCARB2-216ENST00000639300 BAG3O95817 575 aa16.58■□□□□ 0.24
SCARB2-216ENST00000639300 LDHCP07864 332 aa16.58■□□□□ 0.24
SCARB2-216ENST00000639300 CASQ1P31415 396 aa16.58■□□□□ 0.24
SCARB2-216ENST00000639300 LEKR1Q6ZMV7 388 aa16.58■□□□□ 0.24
SCARB2-216ENST00000639300 TMTC2Q8N394 836 aa16.58■□□□□ 0.24
SCARB2-216ENST00000639300 KBTBD3Q8NAB2 608 aa16.58■□□□□ 0.24
SCARB2-216ENST00000639300 PRIMPOLQ96LW4 560 aa16.58■□□□□ 0.24
SCARB2-216ENST00000639300 UTP14AQ9BVJ6 771 aaKnown RBP16.58■□□□□ 0.24
SCARB2-216ENST00000639300 TCP11L1Q9NUJ3 509 aa16.58■□□□□ 0.24
SCARB2-216ENST00000639300 AOX1Q06278 1338 aa16.58■□□□□ 0.24
SCARB2-216ENST00000639300 BRD1O95696 1058 aa16.57■□□□□ 0.24
SCARB2-216ENST00000639300 PPP4R3BQ5MIZ7 849 aa16.57■□□□□ 0.24
SCARB2-216ENST00000639300 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
SCARB2-216ENST00000639300 BTG4Q9NY30 223 aa16.57■□□□□ 0.24
SCARB2-216ENST00000639300 KDM5DQ9BY66 1539 aa16.57■□□□□ 0.24
SCARB2-216ENST00000639300 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.57■□□□□ 0.24
SCARB2-216ENST00000639300 V9GYY5 206 aaPredicted RBP16.57■□□□□ 0.24
SCARB2-216ENST00000639300 B4E1Z4 1266 aa16.57■□□□□ 0.24
SCARB2-216ENST00000639300 RFC4P35249 363 aa16.57■□□□□ 0.24
SCARB2-216ENST00000639300 CACNA2D4Q7Z3S7 1137 aa16.57■□□□□ 0.24
SCARB2-216ENST00000639300 DNAJC10Q8IXB1 793 aa16.57■□□□□ 0.24
SCARB2-216ENST00000639300 ARHGEF10O15013 1369 aa16.57■□□□□ 0.24
SCARB2-216ENST00000639300 BEND3Q5T5X7 828 aa16.57■□□□□ 0.24
SCARB2-216ENST00000639300 ZNF397Q8NF99 534 aaPredicted RBP16.57■□□□□ 0.24
SCARB2-216ENST00000639300 MTIF2P46199 727 aaKnown RBP16.56■□□□□ 0.24
SCARB2-216ENST00000639300 ZNF445P59923 1031 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 SPA17Q15506 151 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 PROSER3Q2NL68 480 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 TRMT1LQ7Z2T5 733 aaKnown RBP16.56■□□□□ 0.24
SCARB2-216ENST00000639300 GAS2L3Q86XJ1 694 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 SETDB2Q96T68 719 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 PLXNC1O60486 1568 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 BCORL1Q5H9F3 1711 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 ITGA6P23229 1130 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 FKBP15Q5T1M5 1219 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 XAGE2Q96GT9 111 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 NEURL1BA8MQ27 555 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 EIF3JO75822 258 aaKnown RBP16.56■□□□□ 0.24
SCARB2-216ENST00000639300 MBD4O95243 580 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 ZNF853P0CG23 659 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 CDC37L1Q7L3B6 337 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 CCDC191Q8NCU4 936 aa16.56■□□□□ 0.24
SCARB2-216ENST00000639300 NEO1Q92859 1461 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 DHX58Q96C10 678 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 SEC62Q99442 399 aaKnown RBP16.55■□□□□ 0.24
SCARB2-216ENST00000639300 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
SCARB2-216ENST00000639300 ME3Q16798 604 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 HELLSQ9NRZ9 838 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 CWC15Q9P013 229 aaKnown RBP16.55■□□□□ 0.24
SCARB2-216ENST00000639300 DNAI1Q9UI46 699 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 PCDH11XQ9BZA7 1347 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 PCDH11YQ9BZA8 1340 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 A0A0D9SFI3 127 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 H0YHG0 523 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 POLR3GO15318 223 aaPredicted RBP16.55■□□□□ 0.24
SCARB2-216ENST00000639300 HS1BP3Q53T59 392 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 KANK3Q6NY19 840 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 C17orf53Q8N3J3 647 aaPredicted RBP16.55■□□□□ 0.24
SCARB2-216ENST00000639300 TMOD2Q9NZR1 351 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 TRIM75PA6NK02 468 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 TMEM132AQ24JP5 1023 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 RAB34Q9BZG1 259 aa16.55■□□□□ 0.24
SCARB2-216ENST00000639300 STX17P56962 302 aa16.54■□□□□ 0.24
SCARB2-216ENST00000639300 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
SCARB2-216ENST00000639300 KIF24Q5T7B8 1368 aa16.54■□□□□ 0.24
SCARB2-216ENST00000639300 RASEFQ8IZ41 740 aa16.54■□□□□ 0.24
SCARB2-216ENST00000639300 IFNKQ9P0W0 207 aa16.54■□□□□ 0.24
SCARB2-216ENST00000639300 GPAA1O43292 621 aa16.54■□□□□ 0.24
SCARB2-216ENST00000639300 TMEM266Q2M3C6 531 aa16.54■□□□□ 0.24
SCARB2-216ENST00000639300 TDRD12Q587J7 1177 aaKnown RBP16.54■□□□□ 0.24
SCARB2-216ENST00000639300 CCDC148Q8NFR7 591 aa16.54■□□□□ 0.24
SCARB2-216ENST00000639300 F8W031 263 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-216ENST00000639300 SYNMO15061 1565 aa16.53■□□□□ 0.24
SCARB2-216ENST00000639300 YEATS4O95619 227 aa16.53■□□□□ 0.24
SCARB2-216ENST00000639300 MAGEB6P1A0A0J9YX57 407 aa16.53■□□□□ 0.24
SCARB2-216ENST00000639300 RRAGBQ5VZM2 374 aa16.53■□□□□ 0.24
SCARB2-216ENST00000639300 CCDC150Q8NCX0 1101 aa16.53■□□□□ 0.24
SCARB2-216ENST00000639300 MYOM2P54296 1465 aa16.53■□□□□ 0.24
SCARB2-216ENST00000639300 SPTY2D1Q68D10 685 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-216ENST00000639300 LEO1Q8WVC0 666 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-216ENST00000639300 PRM3Q9NNZ6 103 aa16.53■□□□□ 0.24
SCARB2-216ENST00000639300 TAF5LO75529 589 aa16.52■□□□□ 0.24
SCARB2-216ENST00000639300 JAKMIP3Q5VZ66 844 aa16.52■□□□□ 0.24
SCARB2-216ENST00000639300 CCDC12Q8WUD4 166 aaPredicted RBP16.52■□□□□ 0.24
SCARB2-216ENST00000639300 APPBP2Q92624 585 aa16.52■□□□□ 0.24
SCARB2-216ENST00000639300 AATKQ6ZMQ8 1374 aa16.52■□□□□ 0.24
SCARB2-216ENST00000639300 ROBO2Q9HCK4 1378 aa16.52■□□□□ 0.24
SCARB2-216ENST00000639300 PRAMEF22A3QJZ6 481 aa16.52■□□□□ 0.24
SCARB2-216ENST00000639300 TSPY3P0CV98 308 aa16.52■□□□□ 0.24
SCARB2-216ENST00000639300 TSPY8P0CW00 308 aa16.52■□□□□ 0.24
SCARB2-216ENST00000639300 TTLL7Q6ZT98 887 aa16.52■□□□□ 0.24
SCARB2-216ENST00000639300 TSPYL1Q9H0U9 437 aa16.52■□□□□ 0.24
SCARB2-216ENST00000639300 IBTKQ9P2D0 1353 aaPredicted RBP16.52■□□□□ 0.23
SCARB2-216ENST00000639300 TRIM47Q96LD4 638 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms