RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 MAP2K2P36507 400 aa25.52■■□□□ 1.68
CLN6-222ENST00000637667 LBX1P52954 281 aa25.52■■□□□ 1.68
CLN6-222ENST00000637667 THSD7BQ9C0I4 1608 aa25.52■■□□□ 1.68
CLN6-222ENST00000637667 AOC2O75106 756 aa25.51■■□□□ 1.67
CLN6-222ENST00000637667 USP17L8P0C7I0 530 aa25.51■■□□□ 1.67
CLN6-222ENST00000637667 HSPA8P11142 646 aaKnown RBP25.51■■□□□ 1.67
CLN6-222ENST00000637667 FOXO4P98177 505 aa25.51■■□□□ 1.67
CLN6-222ENST00000637667 TXNRD3Q86VQ6 643 aa25.51■■□□□ 1.67
CLN6-222ENST00000637667 COA1Q9GZY4 146 aa25.51■■□□□ 1.67
CLN6-222ENST00000637667 ZNF804BA4D1E1 1349 aa25.51■■□□□ 1.67
CLN6-222ENST00000637667 ASTN2O75129 1339 aaPredicted RBP25.51■■□□□ 1.67
CLN6-222ENST00000637667 SULF1Q8IWU6 871 aa25.5■■□□□ 1.67
CLN6-222ENST00000637667 BEGAINQ9BUH8 593 aa25.5■■□□□ 1.67
CLN6-222ENST00000637667 SPEF2Q9C093 1822 aa25.5■■□□□ 1.67
CLN6-222ENST00000637667 HUNKP57058 714 aa25.49■■□□□ 1.67
CLN6-222ENST00000637667 CHRNDQ07001 517 aa25.49■■□□□ 1.67
CLN6-222ENST00000637667 IFIT5Q13325 482 aaKnown RBP25.49■■□□□ 1.67
CLN6-222ENST00000637667 SCARF1Q14162 830 aa25.49■■□□□ 1.67
CLN6-222ENST00000637667 DACT2Q5SW24 774 aa25.49■■□□□ 1.67
CLN6-222ENST00000637667 MYOZ2Q9NPC6 264 aa25.49■■□□□ 1.67
CLN6-222ENST00000637667 CHMP3Q9Y3E7 222 aa25.49■■□□□ 1.67
CLN6-222ENST00000637667 GRM8O00222 908 aa25.48■■□□□ 1.67
CLN6-222ENST00000637667 KLRK1P26718 216 aa25.48■■□□□ 1.67
CLN6-222ENST00000637667 KCNJ4P48050 445 aa25.48■■□□□ 1.67
CLN6-222ENST00000637667 GBA2Q9HCG7 927 aaPredicted RBP25.48■■□□□ 1.67
CLN6-222ENST00000637667 PSME4Q14997 1843 aa25.47■■□□□ 1.67
CLN6-222ENST00000637667 ALDH1L1O75891 902 aa25.47■■□□□ 1.67
CLN6-222ENST00000637667 STRIP1Q5VSL9 837 aa25.47■■□□□ 1.67
CLN6-222ENST00000637667 ANGEL2Q5VTE6 544 aaKnown RBP25.47■■□□□ 1.67
CLN6-222ENST00000637667 C2orf69Q8N8R5 385 aa25.47■■□□□ 1.67
CLN6-222ENST00000637667 FBXW7Q969H0 707 aa25.47■■□□□ 1.67
CLN6-222ENST00000637667 MXD3Q9BW11 206 aa25.47■■□□□ 1.67
CLN6-222ENST00000637667 POLR2AP24928 1970 aaKnown RBP25.47■■□□□ 1.67
CLN6-222ENST00000637667 EPHA10Q5JZY3 1008 aa25.46■■□□□ 1.67
CLN6-222ENST00000637667 SLC4A10Q6U841 1118 aa25.46■■□□□ 1.67
CLN6-222ENST00000637667 LMBR1LQ6UX01 489 aa25.46■■□□□ 1.67
CLN6-222ENST00000637667 C9orf78Q9NZ63 289 aaPredicted RBP25.46■■□□□ 1.67
CLN6-222ENST00000637667 MYO3BQ8WXR4 1341 aa25.45■■□□□ 1.66
CLN6-222ENST00000637667 SRCIN1Q9C0H9 1055 aa25.45■■□□□ 1.66
CLN6-222ENST00000637667 CDCA5Q96FF9 252 aa25.44■■□□□ 1.66
CLN6-222ENST00000637667 E9PSI1 815 aa25.43■■□□□ 1.66
CLN6-222ENST00000637667 BRPF1P55201 1214 aaPredicted RBP25.43■■□□□ 1.66
CLN6-222ENST00000637667 NOGQ13253 232 aa25.43■■□□□ 1.66
CLN6-222ENST00000637667 TTLL5Q6EMB2 1281 aa25.43■■□□□ 1.66
CLN6-222ENST00000637667 OGFOD1Q8N543 542 aa25.43■■□□□ 1.66
CLN6-222ENST00000637667 HELBQ8NG08 1087 aaPredicted RBP25.43■■□□□ 1.66
CLN6-222ENST00000637667 PITPNM2Q9BZ72 1349 aa25.42■■□□□ 1.66
CLN6-222ENST00000637667 SNAP23O00161 211 aa25.42■■□□□ 1.66
CLN6-222ENST00000637667 TAF5LO75529 589 aa25.42■■□□□ 1.66
CLN6-222ENST00000637667 CCDC57Q2TAC2 916 aa25.42■■□□□ 1.66
CLN6-222ENST00000637667 RGMBQ6NW40 437 aa25.42■■□□□ 1.66
CLN6-222ENST00000637667 IRS2Q9Y4H2 1338 aa25.41■■□□□ 1.66
CLN6-222ENST00000637667 TAF7LQ5H9L4 462 aa25.41■■□□□ 1.66
CLN6-222ENST00000637667 C15orf52Q6ZUT6 534 aaKnown RBP25.41■■□□□ 1.66
CLN6-222ENST00000637667 MRPL50Q8N5N7 158 aaKnown RBP25.41■■□□□ 1.66
CLN6-222ENST00000637667 CD209Q9NNX6 404 aa25.41■■□□□ 1.66
CLN6-222ENST00000637667 CA12O43570 354 aa25.4■■□□□ 1.66
CLN6-222ENST00000637667 MMP14P50281 582 aa25.4■■□□□ 1.66
CLN6-222ENST00000637667 GTF2IP78347 998 aa25.4■■□□□ 1.66
CLN6-222ENST00000637667 NBPF9Q3BBW0 867 aa25.4■■□□□ 1.66
CLN6-222ENST00000637667 ZNF594Q96JF6 807 aaPredicted RBP25.4■■□□□ 1.66
CLN6-222ENST00000637667 ZIC5Q96T25 663 aa25.4■■□□□ 1.66
CLN6-222ENST00000637667 LDHAL6AQ6ZMR3 332 aa25.39■■□□□ 1.66
CLN6-222ENST00000637667 SUCLG2Q96I99 432 aa25.39■■□□□ 1.66
CLN6-222ENST00000637667 TSKSQ9UJT2 592 aa25.39■■□□□ 1.66
CLN6-222ENST00000637667 FAM155AB1AL88 458 aaPredicted RBP25.38■■□□□ 1.65
CLN6-222ENST00000637667 WNT10BO00744 389 aa25.38■■□□□ 1.65
CLN6-222ENST00000637667 SLFN5Q08AF3 891 aa25.38■■□□□ 1.65
CLN6-222ENST00000637667 CCDC102AQ96A19 550 aa25.38■■□□□ 1.65
CLN6-222ENST00000637667 CNNM1Q9NRU3 951 aa25.38■■□□□ 1.65
CLN6-222ENST00000637667 ZNF157P51786 506 aaPredicted RBP25.37■■□□□ 1.65
CLN6-222ENST00000637667 KIAA0825Q8IV33 1275 aa25.37■■□□□ 1.65
CLN6-222ENST00000637667 HDAC9Q9UKV0 1011 aa25.37■■□□□ 1.65
CLN6-222ENST00000637667 SCAF8Q9UPN6 1271 aaKnown RBP25.37■■□□□ 1.65
CLN6-222ENST00000637667 NBPF7P0C2Y1 421 aaPredicted RBP25.36■■□□□ 1.65
CLN6-222ENST00000637667 ZNF804AQ7Z570 1209 aa25.36■■□□□ 1.65
CLN6-222ENST00000637667 SSH1Q8WYL5 1049 aa25.36■■□□□ 1.65
CLN6-222ENST00000637667 KAZALD1Q96I82 304 aa25.36■■□□□ 1.65
CLN6-222ENST00000637667 UTYO14607 1347 aa25.36■■□□□ 1.65
CLN6-222ENST00000637667 PTPRCP08575 1304 aa25.36■■□□□ 1.65
CLN6-222ENST00000637667 ZNF646O15015 1829 aaPredicted RBP25.35■■□□□ 1.65
CLN6-222ENST00000637667 PLIN1O60240 522 aa25.35■■□□□ 1.65
CLN6-222ENST00000637667 SASH1O94885 1247 aa25.35■■□□□ 1.65
CLN6-222ENST00000637667 FKBP1BP68106 108 aa25.35■■□□□ 1.65
CLN6-222ENST00000637667 IL1R1P14778 569 aa25.34■■□□□ 1.65
CLN6-222ENST00000637667 SLC10A3P09131 477 aa25.33■■□□□ 1.65
CLN6-222ENST00000637667 PRAMEF18Q5VWM3 479 aa25.33■■□□□ 1.65
CLN6-222ENST00000637667 CERS5Q8N5B7 392 aa25.33■■□□□ 1.65
CLN6-222ENST00000637667 ZBED3Q96IU2 234 aaPredicted RBP25.33■■□□□ 1.65
CLN6-222ENST00000637667 KIF23Q02241 960 aaPredicted RBP25.32■■□□□ 1.64
CLN6-222ENST00000637667 CDCA7LQ96GN5 454 aa25.32■■□□□ 1.64
CLN6-222ENST00000637667 BICC1Q9H694 974 aaKnown RBP25.32■■□□□ 1.64
CLN6-222ENST00000637667 RABL6Q3YEC7 729 aaPredicted RBP25.31■■□□□ 1.64
CLN6-222ENST00000637667 PUS3Q9BZE2 481 aaKnown RBP25.31■■□□□ 1.64
CLN6-222ENST00000637667 UBE4AQ14139 1066 aa25.3■■□□□ 1.64
CLN6-222ENST00000637667 APOBEC3FQ8IUX4 373 aaKnown RBP25.3■■□□□ 1.64
CLN6-222ENST00000637667 ANKRD44Q8N8A2 993 aa25.3■■□□□ 1.64
CLN6-222ENST00000637667 PAPPA2Q9BXP8 1791 aa25.3■■□□□ 1.64
CLN6-222ENST00000637667 A0A1B0GUL6 1792 aa25.29■■□□□ 1.64
CLN6-222ENST00000637667 FKBP1AP62942 108 aaKnown RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms