RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 HFM1A2PYH4 1435 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 ERLIN1O75477 346 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 TBX4P57082 545 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 SWT1Q5T5J6 900 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 ALKBH2Q6NS38 261 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 FAM76AQ8TAV0 307 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 HELQQ8TDG4 1101 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 NUP133Q8WUM0 1156 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 RPGRQ92834 1020 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 POM121Q96HA1 1249 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 CEP63Q96MT8 703 aa4.48□□□□□ -1.69
R3HDM1-220ENST00000628915 POLR1AO95602 1720 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 CDC42BPAQ5VT25 1732 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 CDC42BPBQ9Y5S2 1711 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 ARHGAP35Q9NRY4 1499 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 LINC00854A0A1B0GVQ3 168 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 BAG4O95429 457 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 SKILP12757 684 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 LONRF1Q17RB8 773 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 MAP7D1Q3KQU3 841 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 SPECC1Q5M775 1068 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 MYSM1Q5VVJ2 828 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 CADPS2Q86UW7 1296 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 GAS2L3Q86XJ1 694 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 PDLIM2Q96JY6 352 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 MYO6Q9UM54 1294 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 A6NJR5 290 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 ATMINO43313 823 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 B3GALNT1O75752 331 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 GNAT2P19087 354 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 NUCB1Q02818 461 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 ADCY2Q08462 1091 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 KRT72Q14CN4 511 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 KLHL40Q2TBA0 621 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 RRP12Q5JTH9 1297 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 CCDC158Q5M9N0 1113 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 ACBD5Q5T8D3 534 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 SDCCAG8Q86SQ7 713 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 SAPCD2Q86UD0 394 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 NLRP13Q86W25 1043 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 BORCS6Q96GS4 357 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 DUSP9Q99956 384 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 TRIM7Q9C029 511 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 ALDH8A1Q9H2A2 487 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 SCINQ9Y6U3 715 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 A0A1B0GUA9 196 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 SEMA3EO15041 775 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 FIBPO43427 364 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 FGFR1OPO95684 399 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 PYGBP11216 843 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 PIK3CAP42336 1068 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 ZNF445P59923 1031 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 GOLGA2Q08379 1002 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 RASA3Q14644 834 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 ALDH1L2Q3SY69 923 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 CATIPQ7Z7H3 387 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 ELOA2Q8IYF1 753 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 ARMC2Q8NEN0 867 aa4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 GABPB2Q8TAK5 448 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 THOC1Q96FV9 657 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 PRG4Q92954 1404 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 VIRMAQ69YN4 1812 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-220ENST00000628915 IGHDP01880 384 aa4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 DESP17661 470 aa4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 STIP1P31948 543 aaKnown RBP4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 INPP5BP32019 993 aa4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 ATP6V1E1P36543 226 aa4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 SLC7A5Q01650 507 aa4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 EIF2B5Q13144 721 aaKnown RBP4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 DDB1Q16531 1140 aa4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 IMMTQ16891 758 aaKnown RBP4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 AGAP9Q5VTM2 703 aa4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 RELL1Q8IUW5 271 aa4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 KIAA0825Q8IV33 1275 aa4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 LNPKQ9C0E8 428 aa4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 TFIP11Q9UBB9 837 aaKnown RBP4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 PPP1R9AQ9ULJ8 1098 aa4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 N6AMT1Q9Y5N5 214 aa4.46□□□□□ -1.69
R3HDM1-220ENST00000628915 E2F6O75461 281 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 TRIM37O94972 964 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 RPSAP08865 295 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 CCDC159P0C7I6 412 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 ATP2B1P20020 1258 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 RCN1Q15293 331 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 PTPN14Q15678 1187 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 COBLL1Q53SF7 1204 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 SYCP2LQ5T4T6 812 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 LHX8Q68G74 356 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 MCM10Q7L590 875 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 ANKRD13BQ86YJ7 626 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 MYOCDQ8IZQ8 938 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 GAS2L2Q8NHY3 880 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 CDK5RAP3Q96JB5 506 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 SENP7Q9BQF6 1050 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 TRIM4Q9C037 500 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 COL4A3BPQ9Y5P4 624 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 GJA3Q9Y6H8 435 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 CGNL1Q0VF96 1302 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 KRT10P13645 584 aa4.46□□□□□ -1.7
R3HDM1-220ENST00000628915 KIF5BP33176 963 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms