RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 STK17AQ9UEE5 414 aa6.7□□□□□ -1.34
CDR1-202ENST00000625883 NAGPAQ9UK23 515 aa6.7□□□□□ -1.34
CDR1-202ENST00000625883 TMEM238LA0A1B0GVL6 79 aa6.69□□□□□ -1.34
CDR1-202ENST00000625883 METTL12A8MUP2 240 aa6.69□□□□□ -1.34
CDR1-202ENST00000625883 ADH6P28332 368 aa6.69□□□□□ -1.34
CDR1-202ENST00000625883 GSTT1P30711 240 aa6.69□□□□□ -1.34
CDR1-202ENST00000625883 GRIA4P48058 902 aa6.69□□□□□ -1.34
CDR1-202ENST00000625883 ST13P50502 369 aaKnown RBP6.69□□□□□ -1.34
CDR1-202ENST00000625883 FCGRTP55899 365 aa6.69□□□□□ -1.34
CDR1-202ENST00000625883 FCHSD1Q86WN1 690 aa6.69□□□□□ -1.34
CDR1-202ENST00000625883 NT5DC4Q86YG4 428 aa6.69□□□□□ -1.34
CDR1-202ENST00000625883 TMEM102Q8N9M5 508 aaPredicted RBP6.69□□□□□ -1.34
CDR1-202ENST00000625883 RNF34Q969K3 372 aa6.69□□□□□ -1.34
CDR1-202ENST00000625883 BHLHE41Q9C0J9 482 aaPredicted RBP6.69□□□□□ -1.34
CDR1-202ENST00000625883 SLC6A14Q9UN76 642 aa6.69□□□□□ -1.34
CDR1-202ENST00000625883 ADARB2-AS1A8MUL3 147 aa6.68□□□□□ -1.34
CDR1-202ENST00000625883 ADH7P40394 386 aa6.68□□□□□ -1.34
CDR1-202ENST00000625883 MAP3K10Q02779 954 aa6.68□□□□□ -1.34
CDR1-202ENST00000625883 TAF1CQ15572 869 aaPredicted RBP6.68□□□□□ -1.34
CDR1-202ENST00000625883 NXPE3Q969Y0 559 aa6.68□□□□□ -1.34
CDR1-202ENST00000625883 SPACA7Q96KW9 195 aa6.68□□□□□ -1.34
CDR1-202ENST00000625883 OXCT2Q9BYC2 517 aaPredicted RBP6.68□□□□□ -1.34
CDR1-202ENST00000625883 PBX4Q9BYU1 374 aa6.68□□□□□ -1.34
CDR1-202ENST00000625883 ENAMQ9NRM1 1142 aa6.68□□□□□ -1.34
CDR1-202ENST00000625883 IGF1RP08069 1367 aa6.68□□□□□ -1.34
CDR1-202ENST00000625883 NEURL1BA8MQ27 555 aa6.67□□□□□ -1.34
CDR1-202ENST00000625883 ADAMTS2O95450 1211 aa6.67□□□□□ -1.34
CDR1-202ENST00000625883 SLURP2P0DP57 97 aa6.67□□□□□ -1.34
CDR1-202ENST00000625883 CPB1P15086 417 aa6.67□□□□□ -1.34
CDR1-202ENST00000625883 EIF2AK2P19525 551 aaKnown RBP6.67□□□□□ -1.34
CDR1-202ENST00000625883 ERCC5P28715 1186 aaPredicted RBP6.67□□□□□ -1.34
CDR1-202ENST00000625883 KRT76Q01546 638 aa6.67□□□□□ -1.34
CDR1-202ENST00000625883 PCSK7Q16549 785 aa6.67□□□□□ -1.34
CDR1-202ENST00000625883 SPRED3Q2MJR0 410 aa6.67□□□□□ -1.34
CDR1-202ENST00000625883 ADAMTSL4Q6UY14 1074 aa6.67□□□□□ -1.34
CDR1-202ENST00000625883 FAM35AQ86V20 835 aa6.67□□□□□ -1.34
CDR1-202ENST00000625883 PDE2AO00408 941 aaPredicted RBP6.66□□□□□ -1.34
CDR1-202ENST00000625883 GHRHP01286 108 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 ITPKAP23677 461 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 PTPN12Q05209 780 aaKnown RBP6.66□□□□□ -1.34
CDR1-202ENST00000625883 PERM1Q5SV97 790 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 ANKRD24Q8TF21 1146 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 POP1Q99575 1024 aaKnown RBP6.66□□□□□ -1.34
CDR1-202ENST00000625883 LRRC4BQ9NT99 713 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 PPP4R2Q9NY27 417 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 GGA1Q9UJY5 639 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 GDF2Q9UK05 429 aaPredicted RBP6.66□□□□□ -1.34
CDR1-202ENST00000625883 A0A096LPE4 126 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 A0A1W2PPZ6 126 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 XRCC5P13010 732 aaKnown RBP6.66□□□□□ -1.34
CDR1-202ENST00000625883 DTHD1Q6ZMT9 781 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 SVOPQ8N4V2 548 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 PLD4Q96BZ4 506 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 LPIN3Q9BQK8 851 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 PPM1HQ9ULR3 514 aa6.66□□□□□ -1.34
CDR1-202ENST00000625883 TTF2Q9UNY4 1162 aaKnown RBP6.66□□□□□ -1.34
CDR1-202ENST00000625883 ELOA3CA0A087WX78 387 aaPredicted RBP6.65□□□□□ -1.35
CDR1-202ENST00000625883 ELOA3DA6NLF2 546 aaPredicted RBP6.65□□□□□ -1.35
CDR1-202ENST00000625883 ELOA3BQ3SY89 546 aa6.65□□□□□ -1.35
CDR1-202ENST00000625883 SLCO4C1Q6ZQN7 724 aa6.65□□□□□ -1.35
CDR1-202ENST00000625883 GOLGA6L1Q8N7Z2 621 aa6.65□□□□□ -1.35
CDR1-202ENST00000625883 ELOA3Q8NG57 546 aa6.65□□□□□ -1.35
CDR1-202ENST00000625883 C8orf37Q96NL8 207 aa6.65□□□□□ -1.35
CDR1-202ENST00000625883 SMG9Q9H0W8 520 aaKnown RBP6.65□□□□□ -1.35
CDR1-202ENST00000625883 RBSNQ9H1K0 784 aa6.65□□□□□ -1.35
CDR1-202ENST00000625883 ZNF576Q9H609 170 aa6.65□□□□□ -1.35
CDR1-202ENST00000625883 AKAP2Q9Y2D5 859 aa6.65□□□□□ -1.35
CDR1-202ENST00000625883 FBXO24O75426 580 aa6.64□□□□□ -1.35
CDR1-202ENST00000625883 ZC3H6P61129 1189 aaKnown RBP6.64□□□□□ -1.35
CDR1-202ENST00000625883 ZNF394Q53GI3 561 aa6.64□□□□□ -1.35
CDR1-202ENST00000625883 CEP135Q66GS9 1140 aa6.64□□□□□ -1.35
CDR1-202ENST00000625883 C1orf229Q6ZS94 237 aaPredicted RBP6.64□□□□□ -1.35
CDR1-202ENST00000625883 HS2ST1Q7LGA3 356 aa6.64□□□□□ -1.35
CDR1-202ENST00000625883 ERMP1Q7Z2K6 904 aa6.64□□□□□ -1.35
CDR1-202ENST00000625883 ASAP3Q8TDY4 903 aa6.64□□□□□ -1.35
CDR1-202ENST00000625883 TGIF2Q9GZN2 237 aa6.64□□□□□ -1.35
CDR1-202ENST00000625883 MUC3BQ9H195 1237 aa6.64□□□□□ -1.35
CDR1-202ENST00000625883 FRRS1LQ9P0K9 344 aa6.64□□□□□ -1.35
CDR1-202ENST00000625883 GGT7Q9UJ14 662 aa6.64□□□□□ -1.35
CDR1-202ENST00000625883 TRIM33Q9UPN9 1127 aa6.64□□□□□ -1.35
CDR1-202ENST00000625883 STARD13Q9Y3M8 1113 aa6.64□□□□□ -1.35
CDR1-202ENST00000625883 SMNDC1O75940 238 aaKnown RBP eCLIP6.63□□□□□ -1.35
CDR1-202ENST00000625883 RACK1P63244 317 aaKnown RBP6.63□□□□□ -1.35
CDR1-202ENST00000625883 FAAP100Q0VG06 881 aa6.63□□□□□ -1.35
CDR1-202ENST00000625883 PSAPL1Q6NUJ1 521 aa6.63□□□□□ -1.35
CDR1-202ENST00000625883 ELMSAN1Q6PJG2 1045 aa6.63□□□□□ -1.35
CDR1-202ENST00000625883 ACDQ96AP0 544 aa6.63□□□□□ -1.35
CDR1-202ENST00000625883 TRIM56Q9BRZ2 755 aaKnown RBP6.63□□□□□ -1.35
CDR1-202ENST00000625883 NOC4LQ9BVI4 516 aaKnown RBP6.63□□□□□ -1.35
CDR1-202ENST00000625883 SRA1Q9HD15 236 aaKnown RBP6.63□□□□□ -1.35
CDR1-202ENST00000625883 COPRSQ9NQ92 184 aa6.63□□□□□ -1.35
CDR1-202ENST00000625883 DDX41Q9UJV9 622 aaKnown RBP6.63□□□□□ -1.35
CDR1-202ENST00000625883 SOX13Q9UN79 622 aa6.63□□□□□ -1.35
CDR1-202ENST00000625883 PCDHGB7Q9Y5F8 929 aa6.63□□□□□ -1.35
CDR1-202ENST00000625883 IGSF3O75054 1194 aa6.62□□□□□ -1.35
CDR1-202ENST00000625883 BCRP11274 1271 aa6.62□□□□□ -1.35
CDR1-202ENST00000625883 EPXP11678 715 aa6.62□□□□□ -1.35
CDR1-202ENST00000625883 CCDC85BQ15834 202 aaPredicted RBP6.62□□□□□ -1.35
CDR1-202ENST00000625883 TPTE2Q6XPS3 522 aa6.62□□□□□ -1.35
CDR1-202ENST00000625883 USP48Q86UV5 1035 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms