RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ZNF589Q86UQ0 364 aaPredicted RBP19.52■□□□□ 0.71
LDB3-208ENST00000623007 APPBP2Q92624 585 aa19.52■□□□□ 0.71
LDB3-208ENST00000623007 EDC3Q96F86 508 aaKnown RBP19.52■□□□□ 0.71
LDB3-208ENST00000623007 C4BP0C0L5 1744 aa19.51■□□□□ 0.71
LDB3-208ENST00000623007 AK2P54819 239 aa19.51■□□□□ 0.71
LDB3-208ENST00000623007 ANKRD18AQ8IVF6 992 aa19.51■□□□□ 0.71
LDB3-208ENST00000623007 ADORA1P30542 326 aa19.5■□□□□ 0.71
LDB3-208ENST00000623007 TRAPPC3LQ5T215 181 aa19.5■□□□□ 0.71
LDB3-208ENST00000623007 NLRP3Q96P20 1036 aa19.5■□□□□ 0.71
LDB3-208ENST00000623007 FOXD4L1Q9NU39 408 aa19.5■□□□□ 0.71
LDB3-208ENST00000623007 MYH7P12883 1935 aa19.5■□□□□ 0.71
LDB3-208ENST00000623007 UBE3CQ15386 1083 aa19.49■□□□□ 0.71
LDB3-208ENST00000623007 CCDC102BQ68D86 513 aa19.49■□□□□ 0.71
LDB3-208ENST00000623007 BSDC1Q9NW68 430 aaPredicted RBP19.49■□□□□ 0.71
LDB3-208ENST00000623007 IGSF3O75054 1194 aa19.49■□□□□ 0.71
LDB3-208ENST00000623007 RPS6KB1P23443 525 aa19.49■□□□□ 0.71
LDB3-208ENST00000623007 RFC4P35249 363 aa19.49■□□□□ 0.71
LDB3-208ENST00000623007 TMED8Q6PL24 325 aaPredicted RBP19.49■□□□□ 0.71
LDB3-208ENST00000623007 GNL3LQ9NVN8 582 aaKnown RBP19.49■□□□□ 0.71
LDB3-208ENST00000623007 ZBTB22O15209 634 aa19.48■□□□□ 0.71
LDB3-208ENST00000623007 UBE4AQ14139 1066 aa19.48■□□□□ 0.71
LDB3-208ENST00000623007 NBPF5PQ86XG9 351 aaPredicted RBP19.48■□□□□ 0.71
LDB3-208ENST00000623007 NEK1Q96PY6 1258 aa19.48■□□□□ 0.71
LDB3-208ENST00000623007 WDR33Q9C0J8 1336 aaKnown RBP19.48■□□□□ 0.71
LDB3-208ENST00000623007 ZAP70P43403 619 aa19.47■□□□□ 0.71
LDB3-208ENST00000623007 ZNF772Q68DY9 489 aaPredicted RBP19.47■□□□□ 0.71
LDB3-208ENST00000623007 MAST3O60307 1309 aa19.47■□□□□ 0.71
LDB3-208ENST00000623007 CARMIL3Q8ND23 1372 aa19.47■□□□□ 0.71
LDB3-208ENST00000623007 AKAP11Q9UKA4 1901 aa19.47■□□□□ 0.71
LDB3-208ENST00000623007 FAM177BA6PVY3 158 aa19.46■□□□□ 0.71
LDB3-208ENST00000623007 HSPD1P10809 573 aaKnown RBP19.46■□□□□ 0.71
LDB3-208ENST00000623007 MCAMP43121 646 aa19.46■□□□□ 0.71
LDB3-208ENST00000623007 ADCK5Q3MIX3 580 aa19.46■□□□□ 0.71
LDB3-208ENST00000623007 ERFEQ4G0M1 354 aa19.46■□□□□ 0.71
LDB3-208ENST00000623007 TBC1D9BQ66K14 1250 aa19.46■□□□□ 0.71
LDB3-208ENST00000623007 KRT27Q7Z3Y8 459 aa19.46■□□□□ 0.71
LDB3-208ENST00000623007 ZGPATQ8N5A5 531 aaKnown RBP19.46■□□□□ 0.71
LDB3-208ENST00000623007 ATP6V1DQ9Y5K8 247 aa19.46■□□□□ 0.71
LDB3-208ENST00000623007 DEKP35659 375 aaKnown RBP19.46■□□□□ 0.71
LDB3-208ENST00000623007 MAP3K12Q12852 859 aa19.46■□□□□ 0.71
LDB3-208ENST00000623007 WASHC4Q2M389 1173 aa19.46■□□□□ 0.71
LDB3-208ENST00000623007 ANKRD2Q9GZV1 360 aa19.46■□□□□ 0.71
LDB3-208ENST00000623007 BCL2L12Q9HB09 334 aa19.46■□□□□ 0.71
LDB3-208ENST00000623007 RGS17Q9UGC6 210 aaPredicted RBP19.46■□□□□ 0.71
LDB3-208ENST00000623007 ISY1Q9ULR0 285 aaKnown RBP19.46■□□□□ 0.71
LDB3-208ENST00000623007 NDUFB9Q9Y6M9 179 aa19.46■□□□□ 0.71
LDB3-208ENST00000623007 BAG4O95429 457 aaKnown RBP19.45■□□□□ 0.7
LDB3-208ENST00000623007 ADD2P35612 726 aa19.45■□□□□ 0.7
LDB3-208ENST00000623007 IMMTQ16891 758 aaKnown RBP19.45■□□□□ 0.7
LDB3-208ENST00000623007 SPATA5Q8NB90 893 aa19.45■□□□□ 0.7
LDB3-208ENST00000623007 ARHGEF1Q92888 912 aaKnown RBP19.45■□□□□ 0.7
LDB3-208ENST00000623007 SMC3Q9UQE7 1217 aa19.45■□□□□ 0.7
LDB3-208ENST00000623007 SEMA3EO15041 775 aa19.44■□□□□ 0.7
LDB3-208ENST00000623007 TRAK2O60296 914 aa19.44■□□□□ 0.7
LDB3-208ENST00000623007 BRD1O95696 1058 aa19.44■□□□□ 0.7
LDB3-208ENST00000623007 PDCP20941 246 aa19.44■□□□□ 0.7
LDB3-208ENST00000623007 CHRNDQ07001 517 aa19.44■□□□□ 0.7
LDB3-208ENST00000623007 SEC31BQ9NQW1 1179 aa19.44■□□□□ 0.7
LDB3-208ENST00000623007 FBXL16Q8N461 479 aa19.43■□□□□ 0.7
LDB3-208ENST00000623007 SEC62Q99442 399 aaKnown RBP19.43■□□□□ 0.7
LDB3-208ENST00000623007 C4AP0C0L4 1744 aa19.43■□□□□ 0.7
LDB3-208ENST00000623007 CYP21A2P08686 494 aa19.43■□□□□ 0.7
LDB3-208ENST00000623007 CAVIN4Q5BKX8 364 aa19.43■□□□□ 0.7
LDB3-208ENST00000623007 DHX32Q7L7V1 743 aaKnown RBP19.43■□□□□ 0.7
LDB3-208ENST00000623007 ZMYM6O95789 1325 aa19.43■□□□□ 0.7
LDB3-208ENST00000623007 PHKA1P46020 1223 aa19.42■□□□□ 0.7
LDB3-208ENST00000623007 RBM6P78332 1123 aaKnown RBP19.42■□□□□ 0.7
LDB3-208ENST00000623007 SCARF1Q14162 830 aa19.42■□□□□ 0.7
LDB3-208ENST00000623007 SLC9C2Q5TAH2 1124 aa19.42■□□□□ 0.7
LDB3-208ENST00000623007 PTF1AQ7RTS3 328 aa19.42■□□□□ 0.7
LDB3-208ENST00000623007 OSBP2Q969R2 916 aa19.42■□□□□ 0.7
LDB3-208ENST00000623007 PDS5AQ29RF7 1337 aaKnown RBP19.42■□□□□ 0.7
LDB3-208ENST00000623007 DOCK2Q92608 1830 aa19.42■□□□□ 0.7
LDB3-208ENST00000623007 NPHP1O15259 732 aa19.41■□□□□ 0.7
LDB3-208ENST00000623007 GNAT2P19087 354 aa19.41■□□□□ 0.7
LDB3-208ENST00000623007 RPS8P62241 208 aaKnown RBP19.41■□□□□ 0.7
LDB3-208ENST00000623007 CCDC129Q6ZRS4 1044 aa19.41■□□□□ 0.7
LDB3-208ENST00000623007 NOL8Q76FK4 1167 aaKnown RBP19.41■□□□□ 0.7
LDB3-208ENST00000623007 WDR19Q8NEZ3 1342 aa19.41■□□□□ 0.7
LDB3-208ENST00000623007 ZNF804BA4D1E1 1349 aa19.4■□□□□ 0.7
LDB3-208ENST00000623007 BICDL1Q6ZP65 573 aa19.4■□□□□ 0.7
LDB3-208ENST00000623007 CASZ1Q86V15 1759 aa19.4■□□□□ 0.7
LDB3-208ENST00000623007 M0R2C6 588 aa19.4■□□□□ 0.7
LDB3-208ENST00000623007 KIF3AQ9Y496 699 aa19.4■□□□□ 0.7
LDB3-208ENST00000623007 A0A1B0GUL6 1792 aa19.39■□□□□ 0.69
LDB3-208ENST00000623007 GPAA1O43292 621 aa19.39■□□□□ 0.69
LDB3-208ENST00000623007 IDH1O75874 414 aaKnown RBP19.39■□□□□ 0.69
LDB3-208ENST00000623007 FGD1P98174 961 aa19.39■□□□□ 0.69
LDB3-208ENST00000623007 SRP68Q9UHB9 627 aaKnown RBP19.39■□□□□ 0.69
LDB3-208ENST00000623007 DENND2AQ9ULE3 1009 aa19.39■□□□□ 0.69
LDB3-208ENST00000623007 UBR3Q6ZT12 1888 aa19.38■□□□□ 0.69
LDB3-208ENST00000623007 PDE6AP16499 860 aa19.38■□□□□ 0.69
LDB3-208ENST00000623007 KCNQ4P56696 695 aa19.38■□□□□ 0.69
LDB3-208ENST00000623007 ALX1Q15699 326 aa19.38■□□□□ 0.69
LDB3-208ENST00000623007 CSPP1Q1MSJ5 1256 aa19.38■□□□□ 0.69
LDB3-208ENST00000623007 FAM182BQ5T319 152 aa19.38■□□□□ 0.69
LDB3-208ENST00000623007 HELBQ8NG08 1087 aaPredicted RBP19.38■□□□□ 0.69
LDB3-208ENST00000623007 LLPHQ9BRT6 129 aaKnown RBP19.38■□□□□ 0.69
LDB3-208ENST00000623007 AGXT2Q9BYV1 514 aa19.38■□□□□ 0.69
LDB3-208ENST00000623007 MINPP1Q9UNW1 487 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms