RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ZNF594Q96JF6 807 aaPredicted RBP21.73■■□□□ 1.07
HMGN3-203ENST00000620514 GMLQ99445 158 aa21.73■■□□□ 1.07
HMGN3-203ENST00000620514 MXD3Q9BW11 206 aa21.73■■□□□ 1.07
HMGN3-203ENST00000620514 ZNF408Q9H9D4 720 aa21.73■■□□□ 1.07
HMGN3-203ENST00000620514 ZNF609O15014 1411 aa21.72■■□□□ 1.07
HMGN3-203ENST00000620514 TAF5LO75529 589 aa21.72■■□□□ 1.07
HMGN3-203ENST00000620514 NBPF7P0C2Y1 421 aaPredicted RBP21.72■■□□□ 1.07
HMGN3-203ENST00000620514 TRMT2AQ8IZ69 625 aaKnown RBP21.72■■□□□ 1.07
HMGN3-203ENST00000620514 KAZALD1Q96I82 304 aa21.72■■□□□ 1.07
HMGN3-203ENST00000620514 TLL2Q9Y6L7 1015 aa21.72■■□□□ 1.07
HMGN3-203ENST00000620514 ASTN2O75129 1339 aaPredicted RBP21.72■■□□□ 1.07
HMGN3-203ENST00000620514 WDR33Q9C0J8 1336 aaKnown RBP21.72■■□□□ 1.07
HMGN3-203ENST00000620514 KCNJ4P48050 445 aa21.71■■□□□ 1.07
HMGN3-203ENST00000620514 ZNF280AP59817 542 aaPredicted RBP21.71■■□□□ 1.07
HMGN3-203ENST00000620514 PAXIP1Q6ZW49 1069 aaPredicted RBP21.71■■□□□ 1.07
HMGN3-203ENST00000620514 FBXW7Q969H0 707 aa21.71■■□□□ 1.07
HMGN3-203ENST00000620514 COA1Q9GZY4 146 aa21.71■■□□□ 1.07
HMGN3-203ENST00000620514 ADM5C9JUS6 153 aa21.7■■□□□ 1.06
HMGN3-203ENST00000620514 CCDC57Q2TAC2 916 aa21.7■■□□□ 1.06
HMGN3-203ENST00000620514 DACT2Q5SW24 774 aa21.7■■□□□ 1.06
HMGN3-203ENST00000620514 CYP4F22Q6NT55 531 aa21.7■■□□□ 1.06
HMGN3-203ENST00000620514 KRT26Q7Z3Y9 468 aa21.7■■□□□ 1.06
HMGN3-203ENST00000620514 PTPRCP08575 1304 aa21.7■■□□□ 1.06
HMGN3-203ENST00000620514 ZNF646O15015 1829 aaPredicted RBP21.69■■□□□ 1.06
HMGN3-203ENST00000620514 USP17L8P0C7I0 530 aa21.69■■□□□ 1.06
HMGN3-203ENST00000620514 GRM1Q13255 1194 aa21.69■■□□□ 1.06
HMGN3-203ENST00000620514 TAF7LQ5H9L4 462 aa21.69■■□□□ 1.06
HMGN3-203ENST00000620514 CAPNS2Q96L46 248 aa21.69■■□□□ 1.06
HMGN3-203ENST00000620514 GGA3Q9NZ52 723 aa21.69■■□□□ 1.06
HMGN3-203ENST00000620514 UTYO14607 1347 aa21.69■■□□□ 1.06
HMGN3-203ENST00000620514 A0A1B0GUL6 1792 aa21.69■■□□□ 1.06
HMGN3-203ENST00000620514 POLR2AP24928 1970 aaKnown RBP21.68■■□□□ 1.06
HMGN3-203ENST00000620514 FOXN1O15353 648 aa21.68■■□□□ 1.06
HMGN3-203ENST00000620514 SAPCD2Q86UD0 394 aa21.68■■□□□ 1.06
HMGN3-203ENST00000620514 DCPSQ96C86 337 aaKnown RBP21.68■■□□□ 1.06
HMGN3-203ENST00000620514 IRS2Q9Y4H2 1338 aa21.68■■□□□ 1.06
HMGN3-203ENST00000620514 PLIN1O60240 522 aa21.67■■□□□ 1.06
HMGN3-203ENST00000620514 SCARF1Q14162 830 aa21.67■■□□□ 1.06
HMGN3-203ENST00000620514 ALDH1L2Q3SY69 923 aa21.67■■□□□ 1.06
HMGN3-203ENST00000620514 STRIP1Q5VSL9 837 aa21.67■■□□□ 1.06
HMGN3-203ENST00000620514 LDHAL6AQ6ZMR3 332 aa21.67■■□□□ 1.06
HMGN3-203ENST00000620514 MYOZ2Q9NPC6 264 aa21.67■■□□□ 1.06
HMGN3-203ENST00000620514 SMC4Q9NTJ3 1288 aa21.67■■□□□ 1.06
HMGN3-203ENST00000620514 WBP1LQ9NX94 342 aa21.67■■□□□ 1.06
HMGN3-203ENST00000620514 BICC1Q9H694 974 aaKnown RBP21.66■■□□□ 1.06
HMGN3-203ENST00000620514 CD209Q9NNX6 404 aa21.66■■□□□ 1.06
HMGN3-203ENST00000620514 CNNM1Q9NRU3 951 aa21.66■■□□□ 1.06
HMGN3-203ENST00000620514 GTF2IP78347 998 aa21.65■■□□□ 1.06
HMGN3-203ENST00000620514 ANGEL2Q5VTE6 544 aaKnown RBP21.65■■□□□ 1.06
HMGN3-203ENST00000620514 TTLL5Q6EMB2 1281 aa21.65■■□□□ 1.06
HMGN3-203ENST00000620514 ANKRD44Q8N8A2 993 aa21.65■■□□□ 1.06
HMGN3-203ENST00000620514 PUS3Q9BZE2 481 aaKnown RBP21.65■■□□□ 1.06
HMGN3-203ENST00000620514 AOC2O75106 756 aa21.64■■□□□ 1.05
HMGN3-203ENST00000620514 ECE1P42892 770 aa21.64■■□□□ 1.05
HMGN3-203ENST00000620514 C15orf52Q6ZUT6 534 aaKnown RBP21.64■■□□□ 1.05
HMGN3-203ENST00000620514 USP44Q9H0E7 712 aa21.64■■□□□ 1.05
HMGN3-203ENST00000620514 RABL6Q3YEC7 729 aaPredicted RBP21.63■■□□□ 1.05
HMGN3-203ENST00000620514 SULF1Q8IWU6 871 aa21.63■■□□□ 1.05
HMGN3-203ENST00000620514 AIDAQ96BJ3 306 aa21.63■■□□□ 1.05
HMGN3-203ENST00000620514 SCAF8Q9UPN6 1271 aaKnown RBP21.63■■□□□ 1.05
HMGN3-203ENST00000620514 THSD7BQ9C0I4 1608 aa21.62■■□□□ 1.05
HMGN3-203ENST00000620514 MYO3BQ8WXR4 1341 aa21.62■■□□□ 1.05
HMGN3-203ENST00000620514 NBPF9Q3BBW0 867 aa21.62■■□□□ 1.05
HMGN3-203ENST00000620514 HUNKP57058 714 aa21.61■■□□□ 1.05
HMGN3-203ENST00000620514 KIAA0825Q8IV33 1275 aa21.61■■□□□ 1.05
HMGN3-203ENST00000620514 MIER1Q8N108 512 aa21.61■■□□□ 1.05
HMGN3-203ENST00000620514 CDCA5Q96FF9 252 aa21.61■■□□□ 1.05
HMGN3-203ENST00000620514 HHIPL1Q96JK4 782 aa21.61■■□□□ 1.05
HMGN3-203ENST00000620514 GBA2Q9HCG7 927 aaPredicted RBP21.61■■□□□ 1.05
HMGN3-203ENST00000620514 NOB1Q9ULX3 412 aaKnown RBP21.61■■□□□ 1.05
HMGN3-203ENST00000620514 CT47B1P0C2W7 299 aaPredicted RBP21.6■■□□□ 1.05
HMGN3-203ENST00000620514 MAP2K1Q02750 393 aaPredicted RBP21.6■■□□□ 1.05
HMGN3-203ENST00000620514 ZNF804AQ7Z570 1209 aa21.6■■□□□ 1.05
HMGN3-203ENST00000620514 OGFOD1Q8N543 542 aa21.6■■□□□ 1.05
HMGN3-203ENST00000620514 CERS5Q8N5B7 392 aa21.6■■□□□ 1.05
HMGN3-203ENST00000620514 RIPOR2Q9Y4F9 1068 aa21.6■■□□□ 1.05
HMGN3-203ENST00000620514 WNT10BO00744 389 aa21.59■■□□□ 1.05
HMGN3-203ENST00000620514 SASH1O94885 1247 aa21.59■■□□□ 1.05
HMGN3-203ENST00000620514 IL1R1P14778 569 aa21.59■■□□□ 1.05
HMGN3-203ENST00000620514 CTCFP49711 727 aaPredicted RBP21.59■■□□□ 1.05
HMGN3-203ENST00000620514 LRRC24Q50LG9 513 aa21.59■■□□□ 1.05
HMGN3-203ENST00000620514 TNS4Q8IZW8 715 aa21.59■■□□□ 1.05
HMGN3-203ENST00000620514 JAG2Q9Y219 1238 aa21.59■■□□□ 1.05
HMGN3-203ENST00000620514 PITPNM2Q9BZ72 1349 aa21.58■■□□□ 1.05
HMGN3-203ENST00000620514 DIEXFQ68CQ4 756 aaKnown RBP21.58■■□□□ 1.05
HMGN3-203ENST00000620514 C2orf69Q8N8R5 385 aa21.58■■□□□ 1.05
HMGN3-203ENST00000620514 KLHDC4Q8TBB5 520 aa21.58■■□□□ 1.05
HMGN3-203ENST00000620514 HSPA8P11142 646 aaKnown RBP21.57■■□□□ 1.04
HMGN3-203ENST00000620514 MAP2K2P36507 400 aa21.57■■□□□ 1.04
HMGN3-203ENST00000620514 GYG1P46976 350 aa21.57■■□□□ 1.04
HMGN3-203ENST00000620514 LBX1P52954 281 aa21.57■■□□□ 1.04
HMGN3-203ENST00000620514 RARSP54136 660 aaKnown RBP21.57■■□□□ 1.04
HMGN3-203ENST00000620514 UBE4AQ14139 1066 aa21.57■■□□□ 1.04
HMGN3-203ENST00000620514 BRPF1P55201 1214 aaPredicted RBP21.56■■□□□ 1.04
HMGN3-203ENST00000620514 PRAMEF18Q5VWM3 479 aa21.56■■□□□ 1.04
HMGN3-203ENST00000620514 ZIC5Q96T25 663 aa21.56■■□□□ 1.04
HMGN3-203ENST00000620514 HDAC9Q9UKV0 1011 aa21.56■■□□□ 1.04
HMGN3-203ENST00000620514 MROH5Q6ZUA9 1318 aa21.55■■□□□ 1.04
HMGN3-203ENST00000620514 RGMBQ6NW40 437 aa21.55■■□□□ 1.04
HMGN3-203ENST00000620514 ZBED3Q96IU2 234 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms