RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 LLPHQ9BRT6 129 aaKnown RBP10.09□□□□□ -0.79
LIG4-204ENST00000611712 PRDM10Q9NQV6 1147 aa10.09□□□□□ -0.79
LIG4-204ENST00000611712 AXIN2Q9Y2T1 843 aa10.09□□□□□ -0.79
LIG4-204ENST00000611712 ADCY9O60503 1353 aa10.09□□□□□ -0.79
LIG4-204ENST00000611712 CCP110O43303 1012 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 IGKV5-2P06315 115 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 OTUD7BQ6GQQ9 843 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 TTLL7Q6ZT98 887 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 TMC6Q7Z403 805 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 KIF18AQ8NI77 898 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 ALG1Q9BT22 464 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 ARGLU1Q9NWB6 273 aaPredicted RBP10.08□□□□□ -0.8
LIG4-204ENST00000611712 SIGLEC1Q9BZZ2 1709 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 ERBB3P21860 1342 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 SPTLC2O15270 562 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 HAUS7Q99871 368 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 SPATA31D1Q6ZQQ2 1576 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 NRKQ7Z2Y5 1582 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 A0A1B0GVL5 298 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 SLC5A1P13866 664 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 EPHA10Q5JZY3 1008 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 AMOTL1Q8IY63 956 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 PTPRUQ92729 1446 aa10.08□□□□□ -0.8
LIG4-204ENST00000611712 NR1I2O75469 434 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 GSDMDP57764 484 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 PPP4R3BQ5MIZ7 849 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 CNNM3Q8NE01 707 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 NOL10Q9BSC4 688 aaKnown RBP10.07□□□□□ -0.8
LIG4-204ENST00000611712 SLC26A6Q9BXS9 759 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 PCDH11XQ9BZA7 1347 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 PCDH11YQ9BZA8 1340 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 CYP21A2P08686 494 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 SSRP1Q08945 709 aaKnown RBP10.07□□□□□ -0.8
LIG4-204ENST00000611712 HELBQ8NG08 1087 aaPredicted RBP10.07□□□□□ -0.8
LIG4-204ENST00000611712 PDLIM2Q96JY6 352 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 E7EWF7 191 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 ZBTB43O43298 467 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 RXRAP19793 462 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 SYKP43405 635 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 PTPN12Q05209 780 aaKnown RBP10.07□□□□□ -0.8
LIG4-204ENST00000611712 FAM160A1Q05DH4 1040 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 XAGE2Q96GT9 111 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 DACH1Q9UI36 760 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 CEP135Q66GS9 1140 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 TMEM87AQ8NBN3 555 aa10.07□□□□□ -0.8
LIG4-204ENST00000611712 LRRC24Q50LG9 513 aa10.06□□□□□ -0.8
LIG4-204ENST00000611712 TTLL5Q6EMB2 1281 aa10.06□□□□□ -0.8
LIG4-204ENST00000611712 CCDC196A0A1B0GTZ2 297 aa10.06□□□□□ -0.8
LIG4-204ENST00000611712 KIF2AO00139 706 aaPredicted RBP10.06□□□□□ -0.8
LIG4-204ENST00000611712 FILIP1LQ4L180 1135 aa10.06□□□□□ -0.8
LIG4-204ENST00000611712 NAA16Q6N069 864 aaPredicted RBP10.06□□□□□ -0.8
LIG4-204ENST00000611712 DSCC1Q9BVC3 393 aa10.06□□□□□ -0.8
LIG4-204ENST00000611712 CEP170BQ9Y4F5 1589 aaPredicted RBP10.06□□□□□ -0.8
LIG4-204ENST00000611712 MYO5BQ9ULV0 1848 aa10.06□□□□□ -0.8
LIG4-204ENST00000611712 MARCH6O60337 910 aa10.06□□□□□ -0.8
LIG4-204ENST00000611712 UQCRFS1P1P0C7P4 283 aa10.06□□□□□ -0.8
LIG4-204ENST00000611712 ZNF75DP51815 510 aa10.06□□□□□ -0.8
LIG4-204ENST00000611712 ATL3Q6DD88 541 aa10.06□□□□□ -0.8
LIG4-204ENST00000611712 MFSD6Q6ZSS7 791 aa10.06□□□□□ -0.8
LIG4-204ENST00000611712 PCMTD1Q96MG8 357 aaPredicted RBP10.06□□□□□ -0.8
LIG4-204ENST00000611712 SALL3Q9BXA9 1300 aa10.06□□□□□ -0.8
LIG4-204ENST00000611712 EXOC5O00471 708 aa10.05□□□□□ -0.8
LIG4-204ENST00000611712 HSPD1P10809 573 aaKnown RBP10.05□□□□□ -0.8
LIG4-204ENST00000611712 TOP1P11387 765 aaKnown RBP10.05□□□□□ -0.8
LIG4-204ENST00000611712 MYRIPQ8NFW9 859 aa10.05□□□□□ -0.8
LIG4-204ENST00000611712 TSC1Q92574 1164 aa10.05□□□□□ -0.8
LIG4-204ENST00000611712 ERCC4Q92889 916 aaPredicted RBP10.05□□□□□ -0.8
LIG4-204ENST00000611712 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.05□□□□□ -0.8
LIG4-204ENST00000611712 PAXBP1Q9Y5B6 917 aa10.05□□□□□ -0.8
LIG4-204ENST00000611712 SPDYE4A6NLX3 237 aa10.05□□□□□ -0.8
LIG4-204ENST00000611712 IRS4O14654 1257 aaPredicted RBP10.05□□□□□ -0.8
LIG4-204ENST00000611712 LMOD1P29536 600 aaPredicted RBP10.05□□□□□ -0.8
LIG4-204ENST00000611712 SCRN1Q12765 414 aa10.05□□□□□ -0.8
LIG4-204ENST00000611712 CCDC102BQ68D86 513 aa10.05□□□□□ -0.8
LIG4-204ENST00000611712 BICDL1Q6ZP65 573 aa10.05□□□□□ -0.8
LIG4-204ENST00000611712 APPBP2Q92624 585 aa10.05□□□□□ -0.8
LIG4-204ENST00000611712 GPAA1O43292 621 aa10.05□□□□□ -0.8
LIG4-204ENST00000611712 PPFIBP1Q86W92 1011 aa10.05□□□□□ -0.8
LIG4-204ENST00000611712 USP28Q96RU2 1077 aa10.05□□□□□ -0.8
LIG4-204ENST00000611712 PFKFB2O60825 505 aa10.04□□□□□ -0.8
LIG4-204ENST00000611712 ZAP70P43403 619 aa10.04□□□□□ -0.8
LIG4-204ENST00000611712 KLHL10Q6JEL2 608 aa10.04□□□□□ -0.8
LIG4-204ENST00000611712 ELP1O95163 1332 aa10.04□□□□□ -0.8
LIG4-204ENST00000611712 RANBP6O60518 1105 aaKnown RBP10.04□□□□□ -0.8
LIG4-204ENST00000611712 IPO7O95373 1038 aaKnown RBP10.04□□□□□ -0.8
LIG4-204ENST00000611712 HSPA2P54652 639 aa10.04□□□□□ -0.8
LIG4-204ENST00000611712 BRAPQ7Z569 592 aa10.04□□□□□ -0.8
LIG4-204ENST00000611712 CCDC47Q96A33 483 aaKnown RBP10.04□□□□□ -0.8
LIG4-204ENST00000611712 ZMYND15Q9H091 742 aa10.04□□□□□ -0.8
LIG4-204ENST00000611712 CEP131Q9UPN4 1083 aa10.04□□□□□ -0.8
LIG4-204ENST00000611712 IQSEC3Q9UPP2 1182 aaPredicted RBP10.04□□□□□ -0.8
LIG4-204ENST00000611712 SNW1Q13573 536 aaKnown RBP10.04□□□□□ -0.8
LIG4-204ENST00000611712 DNAJC10Q8IXB1 793 aa10.04□□□□□ -0.8
LIG4-204ENST00000611712 PKNOX2Q96KN3 472 aa10.04□□□□□ -0.8
LIG4-204ENST00000611712 PUS3Q9BZE2 481 aaKnown RBP10.04□□□□□ -0.8
LIG4-204ENST00000611712 RNF41Q9H4P4 317 aaPredicted RBP10.04□□□□□ -0.8
LIG4-204ENST00000611712 MRVI1Q9Y6F6 885 aa10.04□□□□□ -0.8
LIG4-204ENST00000611712 ITGA6P23229 1130 aa10.04□□□□□ -0.8
LIG4-204ENST00000611712 HSP90AA4PQ58FG1 418 aa10.04□□□□□ -0.8
LIG4-204ENST00000611712 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms