RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 IGHMBP2P38935 993 aaKnown RBP30.58■■■□□ 2.49
LSM4-202ENST00000593564 CASP7P55210 303 aa30.58■■■□□ 2.49
LSM4-202ENST00000593564 FKBP5Q13451 457 aaPredicted RBP30.58■■■□□ 2.49
LSM4-202ENST00000593564 ANGEL2Q5VTE6 544 aaKnown RBP30.58■■■□□ 2.49
LSM4-202ENST00000593564 DNAAF4Q8WXU2 420 aa30.58■■■□□ 2.49
LSM4-202ENST00000593564 MYH16Q9H6N6 1097 aa30.58■■■□□ 2.49
LSM4-202ENST00000593564 WDR63Q8IWG1 891 aa30.57■■■□□ 2.48
LSM4-202ENST00000593564 LINS1Q8NG48 757 aa30.57■■■□□ 2.48
LSM4-202ENST00000593564 PITPNM2Q9BZ72 1349 aa30.56■■■□□ 2.48
LSM4-202ENST00000593564 ITGA6P23229 1130 aa30.56■■■□□ 2.48
LSM4-202ENST00000593564 LEMD3Q9Y2U8 911 aa30.56■■■□□ 2.48
LSM4-202ENST00000593564 SPEF2Q9C093 1822 aa30.55■■■□□ 2.48
LSM4-202ENST00000593564 VAMP4O75379 141 aa30.55■■■□□ 2.48
LSM4-202ENST00000593564 ZNF157P51786 506 aaPredicted RBP30.55■■■□□ 2.48
LSM4-202ENST00000593564 DACT2Q5SW24 774 aa30.55■■■□□ 2.48
LSM4-202ENST00000593564 COA1Q9GZY4 146 aa30.55■■■□□ 2.48
LSM4-202ENST00000593564 CSF1RP07333 972 aa30.54■■■□□ 2.48
LSM4-202ENST00000593564 FAM161AQ3B820 660 aa30.54■■■□□ 2.48
LSM4-202ENST00000593564 ANP32CO43423 234 aa30.53■■■□□ 2.48
LSM4-202ENST00000593564 ANKRD2Q9GZV1 360 aa30.53■■■□□ 2.48
LSM4-202ENST00000593564 MYO3BQ8WXR4 1341 aa30.52■■■□□ 2.48
LSM4-202ENST00000593564 CACNA1FO60840 1977 aa30.52■■■□□ 2.48
LSM4-202ENST00000593564 SLC10A3P09131 477 aa30.52■■■□□ 2.48
LSM4-202ENST00000593564 STRIP1Q5VSL9 837 aa30.52■■■□□ 2.48
LSM4-202ENST00000593564 TXNRD3Q86VQ6 643 aa30.52■■■□□ 2.48
LSM4-202ENST00000593564 MPHOSPH8Q99549 860 aa30.52■■■□□ 2.48
LSM4-202ENST00000593564 ZNF804BA4D1E1 1349 aa30.51■■■□□ 2.48
LSM4-202ENST00000593564 FKBP1BP68106 108 aa30.51■■■□□ 2.47
LSM4-202ENST00000593564 KIF23Q02241 960 aaPredicted RBP30.51■■■□□ 2.47
LSM4-202ENST00000593564 EXOSC9Q06265 439 aaKnown RBP30.51■■■□□ 2.47
LSM4-202ENST00000593564 SAGE1Q9NXZ1 904 aa30.51■■■□□ 2.47
LSM4-202ENST00000593564 SALL2Q9Y467 1007 aaPredicted RBP30.51■■■□□ 2.47
LSM4-202ENST00000593564 OGFOD1Q8N543 542 aa30.5■■■□□ 2.47
LSM4-202ENST00000593564 MXD3Q9BW11 206 aa30.5■■■□□ 2.47
LSM4-202ENST00000593564 CASP8AP2Q9UKL3 1982 aa30.48■■■□□ 2.47
LSM4-202ENST00000593564 ZNF646O15015 1829 aaPredicted RBP30.48■■■□□ 2.47
LSM4-202ENST00000593564 MMP14P50281 582 aa30.48■■■□□ 2.47
LSM4-202ENST00000593564 FBXW7Q969H0 707 aa30.48■■■□□ 2.47
LSM4-202ENST00000593564 MCOLN1Q9GZU1 580 aa30.48■■■□□ 2.47
LSM4-202ENST00000593564 PAPPA2Q9BXP8 1791 aa30.47■■■□□ 2.47
LSM4-202ENST00000593564 KLRK1P26718 216 aa30.47■■■□□ 2.47
LSM4-202ENST00000593564 ZEB1P37275 1124 aaPredicted RBP30.47■■■□□ 2.47
LSM4-202ENST00000593564 NBPF9Q3BBW0 867 aa30.47■■■□□ 2.47
LSM4-202ENST00000593564 ANKRD18BA2A2Z9 1011 aa30.46■■■□□ 2.47
LSM4-202ENST00000593564 CCDC85CA6NKD9 419 aa30.46■■■□□ 2.47
LSM4-202ENST00000593564 CHRNDQ07001 517 aa30.46■■■□□ 2.47
LSM4-202ENST00000593564 WNT10BO00744 389 aa30.45■■■□□ 2.47
LSM4-202ENST00000593564 TTLL5Q6EMB2 1281 aa30.45■■■□□ 2.47
LSM4-202ENST00000593564 RASAL3Q86YV0 1011 aa30.45■■■□□ 2.47
LSM4-202ENST00000593564 KCNJ4P48050 445 aa30.44■■■□□ 2.46
LSM4-202ENST00000593564 BEND3Q5T5X7 828 aa30.44■■■□□ 2.46
LSM4-202ENST00000593564 CSRNP1Q96S65 589 aa30.44■■■□□ 2.46
LSM4-202ENST00000593564 SPINK5Q9NQ38 1064 aaPredicted RBP30.44■■■□□ 2.46
LSM4-202ENST00000593564 SCAF8Q9UPN6 1271 aaKnown RBP30.44■■■□□ 2.46
LSM4-202ENST00000593564 F6X3S4 739 aa30.43■■■□□ 2.46
LSM4-202ENST00000593564 FOXO4P98177 505 aa30.43■■■□□ 2.46
LSM4-202ENST00000593564 REM2Q8IYK8 340 aaPredicted RBP30.43■■■□□ 2.46
LSM4-202ENST00000593564 RNF186Q9NXI6 227 aa30.43■■■□□ 2.46
LSM4-202ENST00000593564 ZNF316A6NFI3 1004 aaPredicted RBP30.42■■■□□ 2.46
LSM4-202ENST00000593564 IFIT5Q13325 482 aaKnown RBP30.42■■■□□ 2.46
LSM4-202ENST00000593564 DGKZQ13574 1117 aa30.42■■■□□ 2.46
LSM4-202ENST00000593564 TRPA1O75762 1119 aa30.41■■■□□ 2.46
LSM4-202ENST00000593564 GTF2IP78347 998 aa30.41■■■□□ 2.46
LSM4-202ENST00000593564 HDAC9Q9UKV0 1011 aa30.41■■■□□ 2.46
LSM4-202ENST00000593564 SASH1O94885 1247 aa30.4■■■□□ 2.46
LSM4-202ENST00000593564 C15orf52Q6ZUT6 534 aaKnown RBP30.4■■■□□ 2.46
LSM4-202ENST00000593564 MOB2Q70IA6 237 aa30.4■■■□□ 2.46
LSM4-202ENST00000593564 CD209Q9NNX6 404 aa30.4■■■□□ 2.46
LSM4-202ENST00000593564 IRS2Q9Y4H2 1338 aa30.4■■■□□ 2.46
LSM4-202ENST00000593564 PRAMEF18Q5VWM3 479 aa30.39■■■□□ 2.46
LSM4-202ENST00000593564 KIAA0825Q8IV33 1275 aa30.39■■■□□ 2.46
LSM4-202ENST00000593564 CHMP3Q9Y3E7 222 aa30.38■■■□□ 2.45
LSM4-202ENST00000593564 UBE2Q2LH0YL09 131 aa30.37■■■□□ 2.45
LSM4-202ENST00000593564 TAF5LO75529 589 aa30.37■■■□□ 2.45
LSM4-202ENST00000593564 RGS19P49795 217 aa30.37■■■□□ 2.45
LSM4-202ENST00000593564 ZBED3Q96IU2 234 aaPredicted RBP30.37■■■□□ 2.45
LSM4-202ENST00000593564 AKAP11Q9UKA4 1901 aa30.36■■■□□ 2.45
LSM4-202ENST00000593564 SNAP23O00161 211 aa30.36■■■□□ 2.45
LSM4-202ENST00000593564 GRM8O00222 908 aa30.36■■■□□ 2.45
LSM4-202ENST00000593564 NF2P35240 595 aa30.36■■■□□ 2.45
LSM4-202ENST00000593564 LMBR1LQ6UX01 489 aa30.36■■■□□ 2.45
LSM4-202ENST00000593564 APOBEC3FQ8IUX4 373 aaKnown RBP30.36■■■□□ 2.45
LSM4-202ENST00000593564 HELBQ8NG08 1087 aaPredicted RBP30.36■■■□□ 2.45
LSM4-202ENST00000593564 EPHA10Q5JZY3 1008 aa30.35■■■□□ 2.45
LSM4-202ENST00000593564 TTLL12Q14166 644 aaPredicted RBP30.34■■■□□ 2.45
LSM4-202ENST00000593564 ALDH1L1O75891 902 aa30.33■■■□□ 2.45
LSM4-202ENST00000593564 CCDC57Q2TAC2 916 aa30.33■■■□□ 2.45
LSM4-202ENST00000593564 ZNF804AQ7Z570 1209 aa30.33■■■□□ 2.45
LSM4-202ENST00000593564 FAM9BQ8IZU0 186 aa30.33■■■□□ 2.45
LSM4-202ENST00000593564 IL1R1P14778 569 aa30.32■■■□□ 2.44
LSM4-202ENST00000593564 CERS5Q8N5B7 392 aa30.32■■■□□ 2.44
LSM4-202ENST00000593564 A0A1B0GUL6 1792 aa30.32■■■□□ 2.44
LSM4-202ENST00000593564 MLLT1Q03111 559 aaPredicted RBP30.31■■■□□ 2.44
LSM4-202ENST00000593564 TAF7LQ5H9L4 462 aa30.31■■■□□ 2.44
LSM4-202ENST00000593564 MTMR14Q8NCE2 650 aa30.31■■■□□ 2.44
LSM4-202ENST00000593564 C9orf78Q9NZ63 289 aaPredicted RBP30.31■■■□□ 2.44
LSM4-202ENST00000593564 FKBP1AP62942 108 aaKnown RBP30.3■■■□□ 2.44
LSM4-202ENST00000593564 DLGAP5Q15398 846 aa30.3■■■□□ 2.44
LSM4-202ENST00000593564 LDHAL6AQ6ZMR3 332 aa30.3■■■□□ 2.44
LSM4-202ENST00000593564 ZNF594Q96JF6 807 aaPredicted RBP30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms