RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 GPATCH3Q96I76 525 aa13.1□□□□□ -0.31
SMAD4-214ENST00000592186 POLLQ9UGP5 575 aa13.1□□□□□ -0.31
SMAD4-214ENST00000592186 GPR162Q16538 588 aa13.09□□□□□ -0.31
SMAD4-214ENST00000592186 CCDC158Q5M9N0 1113 aa13.09□□□□□ -0.31
SMAD4-214ENST00000592186 TAOK3Q9H2K8 898 aa13.09□□□□□ -0.31
SMAD4-214ENST00000592186 KIAA1551Q9HCM1 1747 aa13.09□□□□□ -0.31
SMAD4-214ENST00000592186 GNL3LQ9NVN8 582 aaKnown RBP13.09□□□□□ -0.31
SMAD4-214ENST00000592186 LTBP3Q9NS15 1303 aa13.08□□□□□ -0.31
SMAD4-214ENST00000592186 SMARCA5O60264 1052 aaPredicted RBP13.08□□□□□ -0.32
SMAD4-214ENST00000592186 HIBADHP31937 336 aaKnown RBP13.08□□□□□ -0.32
SMAD4-214ENST00000592186 OLFM4Q6UX06 510 aa13.08□□□□□ -0.32
SMAD4-214ENST00000592186 ARHGAP27Q6ZUM4 889 aa13.08□□□□□ -0.32
SMAD4-214ENST00000592186 VPS37DQ86XT2 251 aa13.08□□□□□ -0.32
SMAD4-214ENST00000592186 XAGE2Q96GT9 111 aa13.08□□□□□ -0.32
SMAD4-214ENST00000592186 LNPKQ9C0E8 428 aa13.08□□□□□ -0.32
SMAD4-214ENST00000592186 WWC3Q9ULE0 1092 aa13.08□□□□□ -0.32
SMAD4-214ENST00000592186 SLX4Q8IY92 1834 aa13.08□□□□□ -0.32
SMAD4-214ENST00000592186 MED23Q9ULK4 1368 aa13.07□□□□□ -0.32
SMAD4-214ENST00000592186 SRCAPQ6ZRS2 3230 aa13.07□□□□□ -0.32
SMAD4-214ENST00000592186 G3V3G9 751 aa13.07□□□□□ -0.32
SMAD4-214ENST00000592186 ZBTB22O15209 634 aa13.07□□□□□ -0.32
SMAD4-214ENST00000592186 UQCRFS1P1P0C7P4 283 aa13.07□□□□□ -0.32
SMAD4-214ENST00000592186 KIAA2012Q0VF49 1180 aa13.07□□□□□ -0.32
SMAD4-214ENST00000592186 DCAF8Q5TAQ9 597 aa13.07□□□□□ -0.32
SMAD4-214ENST00000592186 ZNF804AQ7Z570 1209 aa13.07□□□□□ -0.32
SMAD4-214ENST00000592186 FBXO33Q7Z6M2 555 aa13.07□□□□□ -0.32
SMAD4-214ENST00000592186 ZNF512BQ96KM6 892 aaPredicted RBP13.07□□□□□ -0.32
SMAD4-214ENST00000592186 CCDC8Q9H0W5 538 aaPredicted RBP13.07□□□□□ -0.32
SMAD4-214ENST00000592186 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.07□□□□□ -0.32
SMAD4-214ENST00000592186 COL4A1P02462 1669 aa13.07□□□□□ -0.32
SMAD4-214ENST00000592186 TAF1P21675 1872 aa13.06□□□□□ -0.32
SMAD4-214ENST00000592186 SEMA3EO15041 775 aa13.06□□□□□ -0.32
SMAD4-214ENST00000592186 FAM84BQ96KN1 310 aaPredicted RBP13.06□□□□□ -0.32
SMAD4-214ENST00000592186 COA1Q9GZY4 146 aa13.06□□□□□ -0.32
SMAD4-214ENST00000592186 ECHDC1Q9NTX5 307 aa13.06□□□□□ -0.32
SMAD4-214ENST00000592186 DBNLQ9UJU6 430 aaKnown RBP13.06□□□□□ -0.32
SMAD4-214ENST00000592186 TTC41PQ6P2S7 1318 aa13.06□□□□□ -0.32
SMAD4-214ENST00000592186 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
SMAD4-214ENST00000592186 LRRC37AA6NMS7 1700 aa13.05□□□□□ -0.32
SMAD4-214ENST00000592186 SNAP23O00161 211 aa13.05□□□□□ -0.32
SMAD4-214ENST00000592186 RIMBP2O15034 1052 aa13.05□□□□□ -0.32
SMAD4-214ENST00000592186 ERC2O15083 957 aa13.05□□□□□ -0.32
SMAD4-214ENST00000592186 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.323e-7■■□□□ 12.8
SMAD4-214ENST00000592186 MX1P20591 662 aa13.05□□□□□ -0.32
SMAD4-214ENST00000592186 PODNQ7Z5L7 613 aa13.05□□□□□ -0.32
SMAD4-214ENST00000592186 C16orf71Q8IYS4 520 aaPredicted RBP13.05□□□□□ -0.32
SMAD4-214ENST00000592186 DBNDD2Q9BQY9 259 aa13.05□□□□□ -0.32
SMAD4-214ENST00000592186 STAP2Q9UGK3 403 aa13.05□□□□□ -0.32
SMAD4-214ENST00000592186 ZNF609O15014 1411 aa13.04□□□□□ -0.32
SMAD4-214ENST00000592186 WTIPA6NIX2 430 aaPredicted RBP13.04□□□□□ -0.32
SMAD4-214ENST00000592186 NFKBIEO00221 500 aa13.04□□□□□ -0.32
SMAD4-214ENST00000592186 PPIP5K2O43314 1243 aa13.04□□□□□ -0.32
SMAD4-214ENST00000592186 ATP5JP18859 108 aa13.04□□□□□ -0.32
SMAD4-214ENST00000592186 LMNB1P20700 586 aa13.04□□□□□ -0.32
SMAD4-214ENST00000592186 IARSP41252 1262 aaKnown RBP13.04□□□□□ -0.32
SMAD4-214ENST00000592186 GYG1P46976 350 aa13.04□□□□□ -0.32
SMAD4-214ENST00000592186 BCAMP50895 628 aa13.04□□□□□ -0.32
SMAD4-214ENST00000592186 TTC39AQ5SRH9 613 aa13.04□□□□□ -0.32
SMAD4-214ENST00000592186 CCDC102BQ68D86 513 aa13.04□□□□□ -0.32
SMAD4-214ENST00000592186 LARGE2Q8N3Y3 721 aa13.04□□□□□ -0.32
SMAD4-214ENST00000592186 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.04□□□□□ -0.32
SMAD4-214ENST00000592186 JDP2Q8WYK2 163 aa13.04□□□□□ -0.32
SMAD4-214ENST00000592186 OSBPL3Q9H4L5 887 aa13.04□□□□□ -0.32
SMAD4-214ENST00000592186 IRS2Q9Y4H2 1338 aa13.04□□□□□ -0.32
SMAD4-214ENST00000592186 BRCA1P38398 1863 aaKnown RBP13.03□□□□□ -0.32
SMAD4-214ENST00000592186 FRAT2O75474 233 aaPredicted RBP13.03□□□□□ -0.32
SMAD4-214ENST00000592186 GLRX3O76003 335 aaKnown RBP13.03□□□□□ -0.32
SMAD4-214ENST00000592186 IL1R1P14778 569 aa13.03□□□□□ -0.32
SMAD4-214ENST00000592186 ADORA1P30542 326 aa13.03□□□□□ -0.32
SMAD4-214ENST00000592186 PDE1AP54750 535 aa13.03□□□□□ -0.32
SMAD4-214ENST00000592186 SLC51AQ86UW1 340 aa13.03□□□□□ -0.32
SMAD4-214ENST00000592186 TXNRD3Q86VQ6 643 aa13.03□□□□□ -0.32
SMAD4-214ENST00000592186 TDRD7Q8NHU6 1098 aaKnown RBP13.03□□□□□ -0.32
SMAD4-214ENST00000592186 CD209Q9NNX6 404 aa13.03□□□□□ -0.32
SMAD4-214ENST00000592186 ZNF277Q9NRM2 450 aaPredicted RBP13.03□□□□□ -0.32
SMAD4-214ENST00000592186 DENND2AQ9ULE3 1009 aa13.03□□□□□ -0.32
SMAD4-214ENST00000592186 AOX1Q06278 1338 aa13.03□□□□□ -0.32
SMAD4-214ENST00000592186 ARID4AP29374 1257 aaPredicted RBP13.02□□□□□ -0.33
SMAD4-214ENST00000592186 AOC3Q16853 763 aa13.02□□□□□ -0.33
SMAD4-214ENST00000592186 PLEKHM2Q8IWE5 1019 aa13.02□□□□□ -0.33
SMAD4-214ENST00000592186 NIM1KQ8IY84 436 aa13.02□□□□□ -0.33
SMAD4-214ENST00000592186 TLR7Q9NYK1 1049 aaKnown RBP13.02□□□□□ -0.33
SMAD4-214ENST00000592186 ZNRF3Q9ULT6 936 aa13.02□□□□□ -0.33
SMAD4-214ENST00000592186 SPEF2Q9C093 1822 aa13.02□□□□□ -0.33
SMAD4-214ENST00000592186 IGSF3O75054 1194 aa13.01□□□□□ -0.33
SMAD4-214ENST00000592186 KLRK1P26718 216 aa13.01□□□□□ -0.33
SMAD4-214ENST00000592186 PHKA1P46020 1223 aa13.01□□□□□ -0.33
SMAD4-214ENST00000592186 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
SMAD4-214ENST00000592186 GPR101Q96P66 508 aaPredicted RBP13.01□□□□□ -0.33
SMAD4-214ENST00000592186 PDS5AQ29RF7 1337 aaKnown RBP13.01□□□□□ -0.33
SMAD4-214ENST00000592186 SALL3Q9BXA9 1300 aa13.01□□□□□ -0.33
SMAD4-214ENST00000592186 ARFGEF1Q9Y6D6 1849 aa13.01□□□□□ -0.33
SMAD4-214ENST00000592186 LTBP1Q14766 1721 aa13□□□□□ -0.33
SMAD4-214ENST00000592186 ECE2O60344 883 aa13□□□□□ -0.33
SMAD4-214ENST00000592186 PDE4AP27815 886 aa13□□□□□ -0.33
SMAD4-214ENST00000592186 TICAM2Q86XR7 235 aa13□□□□□ -0.33
SMAD4-214ENST00000592186 SPATA5Q8NB90 893 aa13□□□□□ -0.33
SMAD4-214ENST00000592186 WDR66Q8TBY9 1149 aa13□□□□□ -0.33
SMAD4-214ENST00000592186 OTUD7AQ8TE49 926 aaPredicted RBP13□□□□□ -0.33
SMAD4-214ENST00000592186 DUOX1Q9NRD9 1551 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms