RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 MXD3Q9BW11 206 aa22.67■■□□□ 1.22
CIRBP-227ENST00000590188 USP17L3A6NCW0 530 aa22.66■■□□□ 1.22
CIRBP-227ENST00000590188 USP17L4A6NCW7 530 aa22.66■■□□□ 1.22
CIRBP-227ENST00000590188 TMEM88BA6NKF7 163 aa22.66■■□□□ 1.22
CIRBP-227ENST00000590188 BCAR3O75815 825 aa22.66■■□□□ 1.22
CIRBP-227ENST00000590188 USP17L1Q7RTZ2 530 aa22.66■■□□□ 1.22
CIRBP-227ENST00000590188 GLIS2Q9BZE0 524 aaPredicted RBP22.66■■□□□ 1.22
CIRBP-227ENST00000590188 COA1Q9GZY4 146 aa22.66■■□□□ 1.22
CIRBP-227ENST00000590188 A0A1B0GUL6 1792 aa22.66■■□□□ 1.22
CIRBP-227ENST00000590188 BRPF1P55201 1214 aaPredicted RBP22.65■■□□□ 1.22
CIRBP-227ENST00000590188 RABL6Q3YEC7 729 aaPredicted RBP22.65■■□□□ 1.22
CIRBP-227ENST00000590188 KLHDC4Q8TBB5 520 aa22.65■■□□□ 1.22
CIRBP-227ENST00000590188 FRAT1Q92837 279 aaPredicted RBP22.65■■□□□ 1.22
CIRBP-227ENST00000590188 TNNQ9UQP3 1299 aa22.65■■□□□ 1.22
CIRBP-227ENST00000590188 KIF16BQ96L93 1317 aa22.64■■□□□ 1.22
CIRBP-227ENST00000590188 KIF4BQ2VIQ3 1234 aa22.63■■□□□ 1.21
CIRBP-227ENST00000590188 AGBL3Q8NEM8 1001 aa22.63■■□□□ 1.21
CIRBP-227ENST00000590188 PSME4Q14997 1843 aa22.62■■□□□ 1.21
CIRBP-227ENST00000590188 UBTFL1P0CB47 393 aaPredicted RBP22.62■■□□□ 1.21
CIRBP-227ENST00000590188 LRRC24Q50LG9 513 aa22.62■■□□□ 1.21
CIRBP-227ENST00000590188 IRS2Q9Y4H2 1338 aa22.61■■□□□ 1.21
CIRBP-227ENST00000590188 GTF2IP78347 998 aa22.61■■□□□ 1.21
CIRBP-227ENST00000590188 DACT2Q5SW24 774 aa22.61■■□□□ 1.21
CIRBP-227ENST00000590188 DLK2Q6UY11 383 aa22.61■■□□□ 1.21
CIRBP-227ENST00000590188 USP48Q86UV5 1035 aa22.61■■□□□ 1.21
CIRBP-227ENST00000590188 ZNF408Q9H9D4 720 aa22.61■■□□□ 1.21
CIRBP-227ENST00000590188 CD209Q9NNX6 404 aa22.61■■□□□ 1.21
CIRBP-227ENST00000590188 ABT1Q9ULW3 272 aaKnown RBP22.61■■□□□ 1.21
CIRBP-227ENST00000590188 ASTN2O75129 1339 aaPredicted RBP22.6■■□□□ 1.21
CIRBP-227ENST00000590188 ZBED9Q6R2W3 1325 aa22.6■■□□□ 1.21
CIRBP-227ENST00000590188 USP17L8P0C7I0 530 aa22.6■■□□□ 1.21
CIRBP-227ENST00000590188 TTLL5Q6EMB2 1281 aa22.6■■□□□ 1.21
CIRBP-227ENST00000590188 ZC3H15Q8WU90 426 aaKnown RBP22.6■■□□□ 1.21
CIRBP-227ENST00000590188 CLUAP1Q96AJ1 413 aa22.6■■□□□ 1.21
CIRBP-227ENST00000590188 GMLQ99445 158 aa22.6■■□□□ 1.21
CIRBP-227ENST00000590188 MEIS3Q99687 375 aa22.6■■□□□ 1.21
CIRBP-227ENST00000590188 PGAP2Q9UHJ9 254 aa22.6■■□□□ 1.21
CIRBP-227ENST00000590188 JAG2Q9Y219 1238 aa22.6■■□□□ 1.21
CIRBP-227ENST00000590188 METTL24Q5JXM2 366 aa22.59■■□□□ 1.21
CIRBP-227ENST00000590188 STRIP1Q5VSL9 837 aa22.59■■□□□ 1.21
CIRBP-227ENST00000590188 JMYQ8N9B5 988 aa22.59■■□□□ 1.21
CIRBP-227ENST00000590188 ARHGAP45Q92619 1136 aa22.59■■□□□ 1.21
CIRBP-227ENST00000590188 RIPOR2Q9Y4F9 1068 aa22.59■■□□□ 1.21
CIRBP-227ENST00000590188 LRRFIP2Q9Y608 721 aaKnown RBP22.59■■□□□ 1.21
CIRBP-227ENST00000590188 CELF2O95319 508 aaKnown RBP22.58■■□□□ 1.21
CIRBP-227ENST00000590188 TRIM27P14373 513 aa22.58■■□□□ 1.21
CIRBP-227ENST00000590188 ZNF280AP59817 542 aaPredicted RBP22.58■■□□□ 1.21
CIRBP-227ENST00000590188 CST9Q5W186 159 aa22.58■■□□□ 1.21
CIRBP-227ENST00000590188 CDC37L1Q7L3B6 337 aa22.58■■□□□ 1.21
CIRBP-227ENST00000590188 ZNF804AQ7Z570 1209 aa22.58■■□□□ 1.21
CIRBP-227ENST00000590188 GGA3Q9NZ52 723 aa22.58■■□□□ 1.21
CIRBP-227ENST00000590188 CNTNAP1P78357 1384 aa22.58■■□□□ 1.21
CIRBP-227ENST00000590188 ZNF646O15015 1829 aaPredicted RBP22.57■■□□□ 1.2
CIRBP-227ENST00000590188 ADM5C9JUS6 153 aa22.57■■□□□ 1.2
CIRBP-227ENST00000590188 IPO8O15397 1037 aaKnown RBP22.57■■□□□ 1.2
CIRBP-227ENST00000590188 C15orf52Q6ZUT6 534 aaKnown RBP22.57■■□□□ 1.2
CIRBP-227ENST00000590188 DCPSQ96C86 337 aaKnown RBP22.57■■□□□ 1.2
CIRBP-227ENST00000590188 MYOZ2Q9NPC6 264 aa22.57■■□□□ 1.2
CIRBP-227ENST00000590188 ZNF609O15014 1411 aa22.57■■□□□ 1.2
CIRBP-227ENST00000590188 MROH5Q6ZUA9 1318 aa22.57■■□□□ 1.2
CIRBP-227ENST00000590188 GYG1P46976 350 aa22.56■■□□□ 1.2
CIRBP-227ENST00000590188 RFX5P48382 616 aaPredicted RBP22.56■■□□□ 1.2
CIRBP-227ENST00000590188 SCARF1Q14162 830 aa22.56■■□□□ 1.2
CIRBP-227ENST00000590188 ATF7IPQ6VMQ6 1270 aa22.56■■□□□ 1.2
CIRBP-227ENST00000590188 PAXIP1Q6ZW49 1069 aaPredicted RBP22.56■■□□□ 1.2
CIRBP-227ENST00000590188 KRT26Q7Z3Y9 468 aa22.56■■□□□ 1.2
CIRBP-227ENST00000590188 KIAA0825Q8IV33 1275 aa22.56■■□□□ 1.2
CIRBP-227ENST00000590188 VEGFBP49765 207 aa22.55■■□□□ 1.2
CIRBP-227ENST00000590188 GRM1Q13255 1194 aa22.55■■□□□ 1.2
CIRBP-227ENST00000590188 UBE4AQ14139 1066 aa22.55■■□□□ 1.2
CIRBP-227ENST00000590188 INTS3Q68E01 1043 aaKnown RBP22.55■■□□□ 1.2
CIRBP-227ENST00000590188 SIL1Q9H173 461 aa22.55■■□□□ 1.2
CIRBP-227ENST00000590188 SCAF8Q9UPN6 1271 aaKnown RBP22.55■■□□□ 1.2
CIRBP-227ENST00000590188 TRPM7Q96QT4 1865 aa22.55■■□□□ 1.2
CIRBP-227ENST00000590188 MYO3BQ8WXR4 1341 aa22.55■■□□□ 1.2
CIRBP-227ENST00000590188 DEFB115Q30KQ5 88 aa22.54■■□□□ 1.2
CIRBP-227ENST00000590188 ANGEL2Q5VTE6 544 aaKnown RBP22.54■■□□□ 1.2
CIRBP-227ENST00000590188 F8W031 263 aaPredicted RBP22.53■■□□□ 1.2
CIRBP-227ENST00000590188 IL1R1P14778 569 aa22.53■■□□□ 1.2
CIRBP-227ENST00000590188 PTPN12Q05209 780 aaKnown RBP22.53■■□□□ 1.2
CIRBP-227ENST00000590188 ZKSCAN2Q63HK3 967 aa22.53■■□□□ 1.2
CIRBP-227ENST00000590188 OGFOD1Q8N543 542 aa22.53■■□□□ 1.2
CIRBP-227ENST00000590188 RASSF10A6NK89 507 aa22.52■■□□□ 1.2
CIRBP-227ENST00000590188 EYA2O00167 538 aa22.52■■□□□ 1.2
CIRBP-227ENST00000590188 SASH1O94885 1247 aa22.52■■□□□ 1.2
CIRBP-227ENST00000590188 HIBADHP31937 336 aaKnown RBP22.52■■□□□ 1.2
CIRBP-227ENST00000590188 NBPF9Q3BBW0 867 aa22.52■■□□□ 1.2
CIRBP-227ENST00000590188 CERS5Q8N5B7 392 aa22.52■■□□□ 1.2
CIRBP-227ENST00000590188 VGLL2Q8N8G2 317 aa22.52■■□□□ 1.2
CIRBP-227ENST00000590188 FAM84BQ96KN1 310 aaPredicted RBP22.52■■□□□ 1.2
CIRBP-227ENST00000590188 IQSEC3Q9UPP2 1182 aaPredicted RBP22.52■■□□□ 1.2
CIRBP-227ENST00000590188 PA2G4Q9UQ80 394 aaKnown RBP22.52■■□□□ 1.2
CIRBP-227ENST00000590188 POLR2AP24928 1970 aaKnown RBP22.51■■□□□ 1.19
CIRBP-227ENST00000590188 PDE8BO95263 885 aa22.51■■□□□ 1.19
CIRBP-227ENST00000590188 SULF1Q8IWU6 871 aa22.51■■□□□ 1.19
CIRBP-227ENST00000590188 TMEM57Q8N5G2 664 aa22.51■■□□□ 1.19
CIRBP-227ENST00000590188 GNAI3P08754 354 aa22.5■■□□□ 1.19
CIRBP-227ENST00000590188 HSPA1AP0DMV8 641 aaKnown RBP22.5■■□□□ 1.19
CIRBP-227ENST00000590188 HSPA1BP0DMV9 641 aaKnown RBP22.5■■□□□ 1.19
CIRBP-227ENST00000590188 VPS37DQ86XT2 251 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms