RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 MCMDC2Q4G0Z9 681 aa16.58■□□□□ 0.25
SMARCA4-214ENST00000589677 LMNTD2Q8IXW0 634 aa16.58■□□□□ 0.25
SMARCA4-214ENST00000589677 SWAP70Q9UH65 585 aa16.58■□□□□ 0.25
SMARCA4-214ENST00000589677 TRIM14Q14142 442 aa16.58■□□□□ 0.24
SMARCA4-214ENST00000589677 GADD45BO75293 160 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-214ENST00000589677 LUC7L2Q9Y383 392 aaKnown RBP16.58■□□□□ 0.24
SMARCA4-214ENST00000589677 CTTNBP2Q8WZ74 1663 aa16.58■□□□□ 0.24
SMARCA4-214ENST00000589677 DAAM2Q86T65 1068 aa16.58■□□□□ 0.24
SMARCA4-214ENST00000589677 TTC21BQ7Z4L5 1316 aa16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 ATP2B2Q01814 1243 aa16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 ANKLE2Q86XL3 938 aa16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 ZBTB7BO15156 539 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 ATP8B1O43520 1251 aa16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 ZNF76P36508 570 aa16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 FANCCQ00597 558 aa16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 PPFIA1Q13136 1202 aa16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 ATP11AP98196 1134 aa16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 SETDB1Q15047 1291 aa16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 PPFIBP2Q8ND30 876 aa16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 IFT81Q8WYA0 676 aa16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 ZBTB43O43298 467 aa16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 CCDC122Q5T0U0 273 aa16.57■□□□□ 0.24
SMARCA4-214ENST00000589677 ANKRD18BA2A2Z9 1011 aa16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 VAMP4O75379 141 aa16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 ZFYP08048 801 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 UBXN1Q04323 297 aa16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 SPATS2Q86XZ4 545 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 IDEP14735 1019 aa16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 MAP3K9P80192 1104 aa16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 STIM2Q9P246 746 aa16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 DENND4BO75064 1496 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 PTPDC1A2A3K4 754 aa16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 BUB1BO60566 1050 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 PPFIA3O75145 1194 aa16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 NMIQ13287 307 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 TRIM7Q9C029 511 aa16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 ATP10BO94823 1461 aa16.56■□□□□ 0.24
SMARCA4-214ENST00000589677 GOLGA6BA6NDN3 693 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 NME9Q86XW9 330 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 TMTC2Q8N394 836 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 LRRC2Q9BYS8 371 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 EFCAB8A8MWE9 144 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 STAT6P42226 847 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 WWC2Q6AWC2 1192 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 BANK1Q8NDB2 785 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 MAP3K2Q9Y2U5 619 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 NUP153P49790 1475 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 HAND2P61296 217 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 CCDC144CPQ8IYA2 1237 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 SPAG5Q96R06 1193 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 ZNF215Q9UL58 517 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 ADGRF5Q8IZF2 1346 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 RANBP6O60518 1105 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 NBPF7P0C2Y1 421 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 IGHMBP2P38935 993 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 USP5P45974 858 aa16.55■□□□□ 0.24
SMARCA4-214ENST00000589677 STRN4Q9NRL3 753 aa16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 ADAMTS12P58397 1594 aa16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 UBA5Q9GZZ9 404 aa16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 PRAG1Q86YV5 1406 aa16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 CYP26C1Q6V0L0 522 aa16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 C8orf58Q8NAV2 365 aa16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 EFCC1Q9HA90 598 aa16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 HOMER2Q9NSB8 354 aa16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 BLMP54132 1417 aaPredicted RBP16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 ITSN2Q9NZM3 1697 aa16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 FAM83GA6ND36 823 aa16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 PER1O15534 1290 aaPredicted RBP16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 DDX46Q7L014 1031 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 PTPRKQ15262 1439 aa16.54■□□□□ 0.24
SMARCA4-214ENST00000589677 BICDL2A1A5D9 508 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 PI4KAP2A4QPH2 592 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 TCERG1LQ5VWI1 586 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 PI4KAP1Q8N8J0 262 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 IGSF22Q8N9C0 903 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 GIGYF1O75420 1035 aaPredicted RBP16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 ERCC6LQ2NKX8 1250 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 DHX32Q7L7V1 743 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 LEO1Q8WVC0 666 aaPredicted RBP16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 ABCF2Q9UG63 623 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 MACROD2A1Z1Q3 448 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 DHX58Q96C10 678 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 PAIP2Q9BPZ3 127 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 LLPHQ9BRT6 129 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 IKBKGQ9Y6K9 419 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 AOX1Q06278 1338 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 IFIT5Q13325 482 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 RAB11FIP4Q86YS3 637 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 NEK11Q8NG66 645 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 SMC6Q96SB8 1091 aa16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 MTRF1LQ9UGC7 380 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-214ENST00000589677 A0A1B0GVL5 298 aa16.52■□□□□ 0.24
SMARCA4-214ENST00000589677 CCDC160A6NGH7 325 aa16.52■□□□□ 0.24
SMARCA4-214ENST00000589677 NLRP12P59046 1061 aa16.52■□□□□ 0.24
SMARCA4-214ENST00000589677 RPGRIP1Q96KN7 1286 aa16.52■□□□□ 0.24
SMARCA4-214ENST00000589677 KRT23Q9C075 422 aa16.52■□□□□ 0.24
SMARCA4-214ENST00000589677 TRIM75PA6NK02 468 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms