RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CCDC27Q2M243 656 aa17.53■□□□□ 0.4
HDAC5-208ENST00000588419 MXD3Q9BW11 206 aa17.53■□□□□ 0.4
HDAC5-208ENST00000588419 MINPP1Q9UNW1 487 aa17.53■□□□□ 0.4
HDAC5-208ENST00000588419 ECM29Q5VYK3 1845 aa17.52■□□□□ 0.4
HDAC5-208ENST00000588419 CCT4P50991 539 aaKnown RBP17.52■□□□□ 0.4
HDAC5-208ENST00000588419 FAM161AQ3B820 660 aa17.52■□□□□ 0.4
HDAC5-208ENST00000588419 BSDC1Q9NW68 430 aaPredicted RBP17.52■□□□□ 0.4
HDAC5-208ENST00000588419 ZNF609O15014 1411 aa17.52■□□□□ 0.4
HDAC5-208ENST00000588419 ITGA6P23229 1130 aa17.51■□□□□ 0.39
HDAC5-208ENST00000588419 KCNJ4P48050 445 aa17.51■□□□□ 0.39
HDAC5-208ENST00000588419 ZNF280AP59817 542 aaPredicted RBP17.51■□□□□ 0.39
HDAC5-208ENST00000588419 PODNQ7Z5L7 613 aa17.51■□□□□ 0.39
HDAC5-208ENST00000588419 MYH16Q9H6N6 1097 aa17.51■□□□□ 0.39
HDAC5-208ENST00000588419 CHMP3Q9Y3E7 222 aa17.51■□□□□ 0.39
HDAC5-208ENST00000588419 IL16Q14005 1332 aa17.5■□□□□ 0.39
HDAC5-208ENST00000588419 FAM155AB1AL88 458 aaPredicted RBP17.5■□□□□ 0.39
HDAC5-208ENST00000588419 ANP32CO43423 234 aa17.5■□□□□ 0.39
HDAC5-208ENST00000588419 KIF23Q02241 960 aaPredicted RBP17.5■□□□□ 0.39
HDAC5-208ENST00000588419 DGKZQ13574 1117 aa17.5■□□□□ 0.39
HDAC5-208ENST00000588419 GCKRQ14397 625 aa17.5■□□□□ 0.39
HDAC5-208ENST00000588419 DNAAF4Q8WXU2 420 aa17.5■□□□□ 0.39
HDAC5-208ENST00000588419 CCDC102AQ96A19 550 aa17.5■□□□□ 0.39
HDAC5-208ENST00000588419 MPHOSPH8Q99549 860 aa17.5■□□□□ 0.39
HDAC5-208ENST00000588419 MCOLN1Q9GZU1 580 aa17.5■□□□□ 0.39
HDAC5-208ENST00000588419 H7C1W4 665 aa17.49■□□□□ 0.39
HDAC5-208ENST00000588419 KLRK1P26718 216 aa17.49■□□□□ 0.39
HDAC5-208ENST00000588419 TTLL12Q14166 644 aaPredicted RBP17.49■□□□□ 0.39
HDAC5-208ENST00000588419 SASH1O94885 1247 aa17.48■□□□□ 0.39
HDAC5-208ENST00000588419 SLC10A3P09131 477 aa17.48■□□□□ 0.39
HDAC5-208ENST00000588419 EXOSC9Q06265 439 aaKnown RBP17.48■□□□□ 0.39
HDAC5-208ENST00000588419 NBPF9Q3BBW0 867 aa17.48■□□□□ 0.39
HDAC5-208ENST00000588419 PRAMEF18Q5VWM3 479 aa17.48■□□□□ 0.39
HDAC5-208ENST00000588419 MOB2Q70IA6 237 aa17.48■□□□□ 0.39
HDAC5-208ENST00000588419 TXNRD3Q86VQ6 643 aa17.48■□□□□ 0.39
HDAC5-208ENST00000588419 OGFOD1Q8N543 542 aa17.48■□□□□ 0.39
HDAC5-208ENST00000588419 GMLQ99445 158 aa17.48■□□□□ 0.39
HDAC5-208ENST00000588419 ZNF804BA4D1E1 1349 aa17.47■□□□□ 0.39
HDAC5-208ENST00000588419 TRPA1O75762 1119 aa17.47■□□□□ 0.39
HDAC5-208ENST00000588419 DACT2Q5SW24 774 aa17.47■□□□□ 0.39
HDAC5-208ENST00000588419 RASAL3Q86YV0 1011 aa17.47■□□□□ 0.39
HDAC5-208ENST00000588419 COA1Q9GZY4 146 aa17.47■□□□□ 0.39
HDAC5-208ENST00000588419 LEMD3Q9Y2U8 911 aa17.47■□□□□ 0.39
HDAC5-208ENST00000588419 PITPNM2Q9BZ72 1349 aa17.47■□□□□ 0.39
HDAC5-208ENST00000588419 ANKRD18BA2A2Z9 1011 aa17.46■□□□□ 0.39
HDAC5-208ENST00000588419 F6X3S4 739 aa17.46■□□□□ 0.39
HDAC5-208ENST00000588419 KIAA0825Q8IV33 1275 aa17.46■□□□□ 0.39
HDAC5-208ENST00000588419 LINS1Q8NG48 757 aa17.46■□□□□ 0.39
HDAC5-208ENST00000588419 ANKRD2Q9GZV1 360 aa17.46■□□□□ 0.39
HDAC5-208ENST00000588419 MYO3BQ8WXR4 1341 aa17.46■□□□□ 0.38
HDAC5-208ENST00000588419 CASP7P55210 303 aa17.45■□□□□ 0.38
HDAC5-208ENST00000588419 GTF2IP78347 998 aa17.45■□□□□ 0.38
HDAC5-208ENST00000588419 CHRNDQ07001 517 aa17.45■□□□□ 0.38
HDAC5-208ENST00000588419 STRIP1Q5VSL9 837 aa17.45■□□□□ 0.38
HDAC5-208ENST00000588419 PLA2G12BQ9BX93 195 aa17.45■□□□□ 0.38
HDAC5-208ENST00000588419 RNF186Q9NXI6 227 aa17.45■□□□□ 0.38
HDAC5-208ENST00000588419 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.45■□□□□ 0.38
HDAC5-208ENST00000588419 VAMP4O75379 141 aa17.44■□□□□ 0.38
HDAC5-208ENST00000588419 TAF5LO75529 589 aa17.44■□□□□ 0.38
HDAC5-208ENST00000588419 MKRN3Q13064 507 aaKnown RBP17.44■□□□□ 0.38
HDAC5-208ENST00000588419 PRKG1Q13976 671 aa17.44■□□□□ 0.38
HDAC5-208ENST00000588419 TTLL5Q6EMB2 1281 aa17.44■□□□□ 0.38
HDAC5-208ENST00000588419 FAM9BQ8IZU0 186 aa17.44■□□□□ 0.38
HDAC5-208ENST00000588419 HELBQ8NG08 1087 aaPredicted RBP17.44■□□□□ 0.38
HDAC5-208ENST00000588419 SAGE1Q9NXZ1 904 aa17.44■□□□□ 0.38
HDAC5-208ENST00000588419 HDAC9Q9UKV0 1011 aa17.44■□□□□ 0.38
HDAC5-208ENST00000588419 UBE2Q2LH0YL09 131 aa17.43■□□□□ 0.38
HDAC5-208ENST00000588419 SNAP23O00161 211 aa17.43■□□□□ 0.38
HDAC5-208ENST00000588419 WNT10BO00744 389 aa17.43■□□□□ 0.38
HDAC5-208ENST00000588419 NF2P35240 595 aa17.43■□□□□ 0.38
HDAC5-208ENST00000588419 TAF7LQ5H9L4 462 aa17.43■□□□□ 0.38
HDAC5-208ENST00000588419 WDR63Q8IWG1 891 aa17.43■□□□□ 0.38
HDAC5-208ENST00000588419 ARAP2Q8WZ64 1704 aa17.42■□□□□ 0.38
HDAC5-208ENST00000588419 F8W031 263 aaPredicted RBP17.42■□□□□ 0.38
HDAC5-208ENST00000588419 PLIN1O60240 522 aa17.42■□□□□ 0.38
HDAC5-208ENST00000588419 CSF1RP07333 972 aa17.42■□□□□ 0.38
HDAC5-208ENST00000588419 FKBP1BP68106 108 aa17.42■□□□□ 0.38
HDAC5-208ENST00000588419 IFIT5Q13325 482 aaKnown RBP17.42■□□□□ 0.38
HDAC5-208ENST00000588419 CSRNP1Q96S65 589 aa17.42■□□□□ 0.38
HDAC5-208ENST00000588419 MLLT1Q03111 559 aaPredicted RBP17.41■□□□□ 0.38
HDAC5-208ENST00000588419 SLC4A10Q6U841 1118 aa17.41■□□□□ 0.38
HDAC5-208ENST00000588419 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
HDAC5-208ENST00000588419 JAG2Q9Y219 1238 aa17.41■□□□□ 0.38
HDAC5-208ENST00000588419 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
HDAC5-208ENST00000588419 APOBEC3FQ8IUX4 373 aaKnown RBP17.4■□□□□ 0.38
HDAC5-208ENST00000588419 ZNF594Q96JF6 807 aaPredicted RBP17.4■□□□□ 0.38
HDAC5-208ENST00000588419 CD209Q9NNX6 404 aa17.4■□□□□ 0.38
HDAC5-208ENST00000588419 FOXO4P98177 505 aa17.39■□□□□ 0.37
HDAC5-208ENST00000588419 CCDC57Q2TAC2 916 aa17.39■□□□□ 0.37
HDAC5-208ENST00000588419 NCBP3Q53F19 620 aaKnown RBP17.39■□□□□ 0.37
HDAC5-208ENST00000588419 BEND3Q5T5X7 828 aa17.39■□□□□ 0.37
HDAC5-208ENST00000588419 LMBR1LQ6UX01 489 aa17.39■□□□□ 0.37
HDAC5-208ENST00000588419 CNNM1Q9NRU3 951 aa17.39■□□□□ 0.37
HDAC5-208ENST00000588419 C9orf78Q9NZ63 289 aaPredicted RBP17.39■□□□□ 0.37
HDAC5-208ENST00000588419 MYH13Q9UKX3 1938 aa17.39■□□□□ 0.37
HDAC5-208ENST00000588419 ZNF804AQ7Z570 1209 aa17.38■□□□□ 0.37
HDAC5-208ENST00000588419 FZD1Q9UP38 647 aa17.38■□□□□ 0.37
HDAC5-208ENST00000588419 OTOFQ9HC10 1997 aa17.37■□□□□ 0.37
HDAC5-208ENST00000588419 GRM8O00222 908 aa17.37■□□□□ 0.37
HDAC5-208ENST00000588419 ZEB1P37275 1124 aaPredicted RBP17.37■□□□□ 0.37
HDAC5-208ENST00000588419 DLGAP5Q15398 846 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms