RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 DGKZQ13574 1117 aa18.12■□□□□ 0.49
ERCC1-205ENST00000587888 TRPA1O75762 1119 aa18.11■□□□□ 0.49
ERCC1-205ENST00000587888 GCKRQ14397 625 aa18.11■□□□□ 0.49
ERCC1-205ENST00000587888 FAM161AQ3B820 660 aa18.11■□□□□ 0.49
ERCC1-205ENST00000587888 TXNRD3Q86VQ6 643 aa18.11■□□□□ 0.49
ERCC1-205ENST00000587888 SPEF2Q9C093 1822 aa18.1■□□□□ 0.49
ERCC1-205ENST00000587888 ITGA6P23229 1130 aa18.1■□□□□ 0.49
ERCC1-205ENST00000587888 FLIIQ13045 1269 aa18.1■□□□□ 0.49
ERCC1-205ENST00000587888 FKBP5Q13451 457 aaPredicted RBP18.1■□□□□ 0.49
ERCC1-205ENST00000587888 NBPF9Q3BBW0 867 aa18.1■□□□□ 0.49
ERCC1-205ENST00000587888 PRAMEF18Q5VWM3 479 aa18.1■□□□□ 0.49
ERCC1-205ENST00000587888 RNF186Q9NXI6 227 aa18.1■□□□□ 0.49
ERCC1-205ENST00000587888 MED23Q9ULK4 1368 aa18.09■□□□□ 0.49
ERCC1-205ENST00000587888 SLC10A3P09131 477 aa18.09■□□□□ 0.49
ERCC1-205ENST00000587888 DACT2Q5SW24 774 aa18.09■□□□□ 0.49
ERCC1-205ENST00000587888 MOB2Q70IA6 237 aa18.09■□□□□ 0.49
ERCC1-205ENST00000587888 OGFOD1Q8N543 542 aa18.09■□□□□ 0.49
ERCC1-205ENST00000587888 CSRNP1Q96S65 589 aa18.09■□□□□ 0.49
ERCC1-205ENST00000587888 MPHOSPH8Q99549 860 aa18.09■□□□□ 0.49
ERCC1-205ENST00000587888 COA1Q9GZY4 146 aa18.09■□□□□ 0.49
ERCC1-205ENST00000587888 MRS2Q9HD23 443 aa18.09■□□□□ 0.49
ERCC1-205ENST00000587888 LEMD3Q9Y2U8 911 aa18.09■□□□□ 0.49
ERCC1-205ENST00000587888 MYH3P11055 1940 aa18.08■□□□□ 0.49
ERCC1-205ENST00000587888 IL16Q14005 1332 aa18.08■□□□□ 0.49
ERCC1-205ENST00000587888 DNAAF4Q8WXU2 420 aa18.08■□□□□ 0.48
ERCC1-205ENST00000587888 ZNF609O15014 1411 aa18.07■□□□□ 0.48
ERCC1-205ENST00000587888 ZNF804BA4D1E1 1349 aa18.07■□□□□ 0.48
ERCC1-205ENST00000587888 VAMP4O75379 141 aa18.07■□□□□ 0.48
ERCC1-205ENST00000587888 KLRK1P26718 216 aa18.07■□□□□ 0.48
ERCC1-205ENST00000587888 STRIP1Q5VSL9 837 aa18.07■□□□□ 0.48
ERCC1-205ENST00000587888 TTLL5Q6EMB2 1281 aa18.07■□□□□ 0.48
ERCC1-205ENST00000587888 PLA2G12BQ9BX93 195 aa18.07■□□□□ 0.48
ERCC1-205ENST00000587888 ANKRD2Q9GZV1 360 aa18.07■□□□□ 0.48
ERCC1-205ENST00000587888 MYH16Q9H6N6 1097 aa18.07■□□□□ 0.48
ERCC1-205ENST00000587888 SAGE1Q9NXZ1 904 aa18.07■□□□□ 0.48
ERCC1-205ENST00000587888 PSME4Q14997 1843 aa18.07■□□□□ 0.48
ERCC1-205ENST00000587888 PITPNM2Q9BZ72 1349 aa18.06■□□□□ 0.48
ERCC1-205ENST00000587888 FANCIQ9NVI1 1328 aa18.06■□□□□ 0.48
ERCC1-205ENST00000587888 UBE2Q2LH0YL09 131 aa18.06■□□□□ 0.48
ERCC1-205ENST00000587888 CSF1RP07333 972 aa18.06■□□□□ 0.48
ERCC1-205ENST00000587888 KCNJ4P48050 445 aa18.06■□□□□ 0.48
ERCC1-205ENST00000587888 CASP7P55210 303 aa18.06■□□□□ 0.48
ERCC1-205ENST00000587888 MLLT1Q03111 559 aaPredicted RBP18.06■□□□□ 0.48
ERCC1-205ENST00000587888 EXOSC9Q06265 439 aaKnown RBP18.06■□□□□ 0.48
ERCC1-205ENST00000587888 TTLL12Q14166 644 aaPredicted RBP18.06■□□□□ 0.48
ERCC1-205ENST00000587888 LINS1Q8NG48 757 aa18.06■□□□□ 0.48
ERCC1-205ENST00000587888 WNT10BO00744 389 aa18.05■□□□□ 0.48
ERCC1-205ENST00000587888 FKBP1BP68106 108 aa18.05■□□□□ 0.48
ERCC1-205ENST00000587888 GTF2IP78347 998 aa18.05■□□□□ 0.48
ERCC1-205ENST00000587888 CHRNDQ07001 517 aa18.05■□□□□ 0.48
ERCC1-205ENST00000587888 RASAL3Q86YV0 1011 aa18.05■□□□□ 0.48
ERCC1-205ENST00000587888 HELBQ8NG08 1087 aaPredicted RBP18.05■□□□□ 0.48
ERCC1-205ENST00000587888 MYO3BQ8WXR4 1341 aa18.04■□□□□ 0.48
ERCC1-205ENST00000587888 ANKRD18BA2A2Z9 1011 aa18.04■□□□□ 0.48
ERCC1-205ENST00000587888 SNAP23O00161 211 aa18.04■□□□□ 0.48
ERCC1-205ENST00000587888 TAF5LO75529 589 aa18.04■□□□□ 0.48
ERCC1-205ENST00000587888 SASH1O94885 1247 aa18.04■□□□□ 0.48
ERCC1-205ENST00000587888 KIAA0825Q8IV33 1275 aa18.04■□□□□ 0.48
ERCC1-205ENST00000587888 WDR63Q8IWG1 891 aa18.04■□□□□ 0.48
ERCC1-205ENST00000587888 CHMP3Q9Y3E7 222 aa18.04■□□□□ 0.48
ERCC1-205ENST00000587888 F6X3S4 739 aa18.03■□□□□ 0.48
ERCC1-205ENST00000587888 ANP32CO43423 234 aa18.03■□□□□ 0.48
ERCC1-205ENST00000587888 RGS19P49795 217 aa18.03■□□□□ 0.48
ERCC1-205ENST00000587888 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
ERCC1-205ENST00000587888 AKAP11Q9UKA4 1901 aa18.02■□□□□ 0.48
ERCC1-205ENST00000587888 NF2P35240 595 aa18.02■□□□□ 0.48
ERCC1-205ENST00000587888 FOXO4P98177 505 aa18.02■□□□□ 0.48
ERCC1-205ENST00000587888 IFIT5Q13325 482 aaKnown RBP18.02■□□□□ 0.48
ERCC1-205ENST00000587888 PRKG1Q13976 671 aa18.02■□□□□ 0.48
ERCC1-205ENST00000587888 REM2Q8IYK8 340 aaPredicted RBP18.02■□□□□ 0.48
ERCC1-205ENST00000587888 CD209Q9NNX6 404 aa18.02■□□□□ 0.48
ERCC1-205ENST00000587888 HDAC9Q9UKV0 1011 aa18.02■□□□□ 0.48
ERCC1-205ENST00000587888 MKRN3Q13064 507 aaKnown RBP18.01■□□□□ 0.47
ERCC1-205ENST00000587888 SPINK5Q9NQ38 1064 aaPredicted RBP18.01■□□□□ 0.47
ERCC1-205ENST00000587888 PAPPA2Q9BXP8 1791 aa18■□□□□ 0.47
ERCC1-205ENST00000587888 PLIN1O60240 522 aa18■□□□□ 0.47
ERCC1-205ENST00000587888 BEND3Q5T5X7 828 aa18■□□□□ 0.47
ERCC1-205ENST00000587888 ZBTB4Q9P1Z0 1013 aaPredicted RBP18■□□□□ 0.47
ERCC1-205ENST00000587888 TBC1D8O95759 1140 aa17.99■□□□□ 0.47
ERCC1-205ENST00000587888 MMP14P50281 582 aa17.99■□□□□ 0.47
ERCC1-205ENST00000587888 LMBR1LQ6UX01 489 aa17.99■□□□□ 0.47
ERCC1-205ENST00000587888 ZNF594Q96JF6 807 aaPredicted RBP17.99■□□□□ 0.47
ERCC1-205ENST00000587888 F8W031 263 aaPredicted RBP17.98■□□□□ 0.47
ERCC1-205ENST00000587888 DLGAP5Q15398 846 aa17.98■□□□□ 0.47
ERCC1-205ENST00000587888 TAF7LQ5H9L4 462 aa17.98■□□□□ 0.47
ERCC1-205ENST00000587888 ARMC9Q7Z3E5 817 aa17.98■□□□□ 0.47
ERCC1-205ENST00000587888 FAM9BQ8IZU0 186 aa17.98■□□□□ 0.47
ERCC1-205ENST00000587888 ZNF646O15015 1829 aaPredicted RBP17.98■□□□□ 0.47
ERCC1-205ENST00000587888 PTPN12Q05209 780 aaKnown RBP17.97■□□□□ 0.47
ERCC1-205ENST00000587888 CCDC57Q2TAC2 916 aa17.97■□□□□ 0.47
ERCC1-205ENST00000587888 EPHA10Q5JZY3 1008 aa17.97■□□□□ 0.47
ERCC1-205ENST00000587888 APOBEC3FQ8IUX4 373 aaKnown RBP17.97■□□□□ 0.47
ERCC1-205ENST00000587888 CERS5Q8N5B7 392 aa17.97■□□□□ 0.47
ERCC1-205ENST00000587888 FZD1Q9UP38 647 aa17.97■□□□□ 0.47
ERCC1-205ENST00000587888 JAG2Q9Y219 1238 aa17.97■□□□□ 0.47
ERCC1-205ENST00000587888 SLC4A10Q6U841 1118 aa17.96■□□□□ 0.47
ERCC1-205ENST00000587888 LDHAL6AQ6ZMR3 332 aa17.96■□□□□ 0.47
ERCC1-205ENST00000587888 ZNF804AQ7Z570 1209 aa17.96■□□□□ 0.47
ERCC1-205ENST00000587888 CTU1Q7Z7A3 348 aaKnown RBP17.96■□□□□ 0.47
ERCC1-205ENST00000587888 ZBED3Q96IU2 234 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms