RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 LEMD3Q9Y2U8 911 aa16.24■□□□□ 0.19
DNMT1-205ENST00000585920 TAF1P21675 1872 aa16.24■□□□□ 0.19
DNMT1-205ENST00000585920 SURF6O75683 361 aaKnown RBP16.23■□□□□ 0.19
DNMT1-205ENST00000585920 IARSP41252 1262 aaKnown RBP16.23■□□□□ 0.19
DNMT1-205ENST00000585920 WASHC4Q2M389 1173 aa16.23■□□□□ 0.19
DNMT1-205ENST00000585920 C9orf131Q5VYM1 1079 aa16.23■□□□□ 0.19
DNMT1-205ENST00000585920 ZC3H12CQ9C0D7 883 aaKnown RBP16.23■□□□□ 0.19
DNMT1-205ENST00000585920 VPS33BQ9H267 617 aa16.23■□□□□ 0.19
DNMT1-205ENST00000585920 ARFGEF1Q9Y6D6 1849 aa16.23■□□□□ 0.19
DNMT1-205ENST00000585920 RIMBP2O15034 1052 aa16.22■□□□□ 0.19
DNMT1-205ENST00000585920 PPIP5K2O43314 1243 aa16.22■□□□□ 0.19
DNMT1-205ENST00000585920 OS9Q13438 667 aaPredicted RBP16.22■□□□□ 0.19
DNMT1-205ENST00000585920 ATG9AQ7Z3C6 839 aa16.22■□□□□ 0.19
DNMT1-205ENST00000585920 SIRT2Q8IXJ6 389 aa16.22■□□□□ 0.19
DNMT1-205ENST00000585920 LARGE2Q8N3Y3 721 aa16.22■□□□□ 0.19
DNMT1-205ENST00000585920 RNF181Q9P0P0 153 aa16.22■□□□□ 0.19
DNMT1-205ENST00000585920 CEP126Q9P2H0 1117 aa16.22■□□□□ 0.19
DNMT1-205ENST00000585920 CACNA1SQ13698 1873 aa16.22■□□□□ 0.19
DNMT1-205ENST00000585920 ZNF804BA4D1E1 1349 aa16.21■□□□□ 0.19
DNMT1-205ENST00000585920 SNED1Q8TER0 1413 aa16.21■□□□□ 0.19
DNMT1-205ENST00000585920 STK25O00506 426 aa16.21■□□□□ 0.19
DNMT1-205ENST00000585920 PDE8BO95263 885 aa16.21■□□□□ 0.19
DNMT1-205ENST00000585920 PRELPP51888 382 aa16.21■□□□□ 0.19
DNMT1-205ENST00000585920 AOC3Q16853 763 aa16.21■□□□□ 0.19
DNMT1-205ENST00000585920 JDP2Q8WYK2 163 aa16.21■□□□□ 0.19
DNMT1-205ENST00000585920 PCDHB15Q9Y5E8 787 aa16.21■□□□□ 0.19
DNMT1-205ENST00000585920 WTIPA6NIX2 430 aaPredicted RBP16.2■□□□□ 0.18
DNMT1-205ENST00000585920 G3V3G9 751 aa16.2■□□□□ 0.18
DNMT1-205ENST00000585920 KIAA2012Q0VF49 1180 aa16.2■□□□□ 0.18
DNMT1-205ENST00000585920 GPR101Q96P66 508 aaPredicted RBP16.2■□□□□ 0.18
DNMT1-205ENST00000585920 NOP58Q9Y2X3 529 aaKnown RBP16.2■□□□□ 0.18
DNMT1-205ENST00000585920 SNAP23O00161 211 aa16.19■□□□□ 0.18
DNMT1-205ENST00000585920 UBE4AQ14139 1066 aa16.19■□□□□ 0.18
DNMT1-205ENST00000585920 HSP90AB4PQ58FF6 505 aa16.19■□□□□ 0.18
DNMT1-205ENST00000585920 TFCP2Q12800 502 aa16.18■□□□□ 0.18
DNMT1-205ENST00000585920 PUM3Q15397 648 aaKnown RBP16.18■□□□□ 0.18
DNMT1-205ENST00000585920 NIM1KQ8IY84 436 aa16.18■□□□□ 0.18
DNMT1-205ENST00000585920 VGLL2Q8N8G2 317 aa16.18■□□□□ 0.18
DNMT1-205ENST00000585920 FARP1Q9Y4F1 1045 aaPredicted RBP16.18■□□□□ 0.18
DNMT1-205ENST00000585920 NEFLP07196 543 aa16.17■□□□□ 0.18
DNMT1-205ENST00000585920 IFIT1P09914 478 aaKnown RBP16.17■□□□□ 0.18
DNMT1-205ENST00000585920 DOK7Q18PE1 504 aa16.17■□□□□ 0.18
DNMT1-205ENST00000585920 ERC1Q8IUD2 1116 aa16.17■□□□□ 0.18
DNMT1-205ENST00000585920 LPIN2Q92539 896 aa16.17■□□□□ 0.18
DNMT1-205ENST00000585920 EXOC6BQ9Y2D4 811 aa16.17■□□□□ 0.18
DNMT1-205ENST00000585920 AKAP2Q9Y2D5 859 aa16.17■□□□□ 0.18
DNMT1-205ENST00000585920 GOLGB1Q14789 3259 aaKnown RBP16.17■□□□□ 0.18
DNMT1-205ENST00000585920 LRRC37AA6NMS7 1700 aa16.16■□□□□ 0.18
DNMT1-205ENST00000585920 SASH1O94885 1247 aa16.16■□□□□ 0.18
DNMT1-205ENST00000585920 SLC5A1P13866 664 aa16.16■□□□□ 0.18
DNMT1-205ENST00000585920 C15orf52Q6ZUT6 534 aaKnown RBP16.16■□□□□ 0.18
DNMT1-205ENST00000585920 FER1L6Q2WGJ9 1857 aa16.16■□□□□ 0.18
DNMT1-205ENST00000585920 MED23Q9ULK4 1368 aa16.15■□□□□ 0.18
DNMT1-205ENST00000585920 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.15■□□□□ 0.18
DNMT1-205ENST00000585920 RAB11FIP3O75154 756 aa16.15■□□□□ 0.18
DNMT1-205ENST00000585920 FGFR2P21802 821 aa16.15■□□□□ 0.18
DNMT1-205ENST00000585920 KLRK1P26718 216 aa16.15■□□□□ 0.18
DNMT1-205ENST00000585920 ATP2B3Q16720 1220 aa16.15■□□□□ 0.18
DNMT1-205ENST00000585920 CAVIN4Q5BKX8 364 aa16.15■□□□□ 0.18
DNMT1-205ENST00000585920 TXNRD3Q86VQ6 643 aa16.15■□□□□ 0.18
DNMT1-205ENST00000585920 ZFP91Q96JP5 570 aaPredicted RBP16.15■□□□□ 0.18
DNMT1-205ENST00000585920 COA1Q9GZY4 146 aa16.15■□□□□ 0.18
DNMT1-205ENST00000585920 TSPYL2Q9H2G4 693 aaPredicted RBP16.15■□□□□ 0.18
DNMT1-205ENST00000585920 DBNDD1Q9H9R9 158 aa16.15■□□□□ 0.18
DNMT1-205ENST00000585920 ZNRF3Q9ULT6 936 aa16.15■□□□□ 0.18
DNMT1-205ENST00000585920 APBB1O00213 710 aa16.14■□□□□ 0.17
DNMT1-205ENST00000585920 EIF6P56537 245 aaKnown RBP16.14■□□□□ 0.17
DNMT1-205ENST00000585920 TIMM10P62072 90 aa16.14■□□□□ 0.17
DNMT1-205ENST00000585920 DPY19L2Q6NUT2 758 aa16.14■□□□□ 0.17
DNMT1-205ENST00000585920 ZNF804AQ7Z570 1209 aa16.14■□□□□ 0.17
DNMT1-205ENST00000585920 VPS37DQ86XT2 251 aa16.14■□□□□ 0.17
DNMT1-205ENST00000585920 NEUROD6Q96NK8 337 aa16.14■□□□□ 0.17
DNMT1-205ENST00000585920 RWDD1Q9H446 243 aaPredicted RBP16.14■□□□□ 0.17
DNMT1-205ENST00000585920 DCTPP1Q9H773 170 aa16.14■□□□□ 0.17
DNMT1-205ENST00000585920 SPEF2Q9C093 1822 aa16.14■□□□□ 0.17
DNMT1-205ENST00000585920 UTRNP46939 3433 aa16.14■□□□□ 0.17
DNMT1-205ENST00000585920 ZC3H4Q9UPT8 1303 aaKnown RBP16.14■□□□□ 0.17
DNMT1-205ENST00000585920 DUOX1Q9NRD9 1551 aa16.13■□□□□ 0.17
DNMT1-205ENST00000585920 FZD9O00144 591 aa16.13■□□□□ 0.17
DNMT1-205ENST00000585920 GTPBP6O43824 516 aaPredicted RBP16.13■□□□□ 0.17
DNMT1-205ENST00000585920 ECE2O60344 883 aa16.13■□□□□ 0.17
DNMT1-205ENST00000585920 HIBADHP31937 336 aaKnown RBP16.13■□□□□ 0.17
DNMT1-205ENST00000585920 GYG1P46976 350 aa16.13■□□□□ 0.17
DNMT1-205ENST00000585920 HDAC1Q13547 482 aaPredicted RBP16.13■□□□□ 0.17
DNMT1-205ENST00000585920 PODNQ7Z5L7 613 aa16.13■□□□□ 0.17
DNMT1-205ENST00000585920 RHPN1Q8TCX5 695 aa16.13■□□□□ 0.17
DNMT1-205ENST00000585920 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
DNMT1-205ENST00000585920 FAM84BQ96KN1 310 aaPredicted RBP16.13■□□□□ 0.17
DNMT1-205ENST00000585920 GPR108Q9NPR9 543 aa16.13■□□□□ 0.17
DNMT1-205ENST00000585920 A0A1B0GUL7 405 aa16.12■□□□□ 0.17
DNMT1-205ENST00000585920 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.12■□□□□ 0.17
DNMT1-205ENST00000585920 IRS2Q9Y4H2 1338 aa16.12■□□□□ 0.17
DNMT1-205ENST00000585920 PRKAR2AP13861 404 aaKnown RBP16.11■□□□□ 0.17
DNMT1-205ENST00000585920 YY1P25490 414 aa16.11■□□□□ 0.17
DNMT1-205ENST00000585920 TNNI3KQ59H18 835 aa16.11■□□□□ 0.17
DNMT1-205ENST00000585920 GORABQ5T7V8 394 aa16.11■□□□□ 0.17
DNMT1-205ENST00000585920 FBXO33Q7Z6M2 555 aa16.11■□□□□ 0.17
DNMT1-205ENST00000585920 BCL11AQ9H165 835 aa16.11■□□□□ 0.17
DNMT1-205ENST00000585920 CD209Q9NNX6 404 aa16.11■□□□□ 0.17
DNMT1-205ENST00000585920 STK24Q9Y6E0 443 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms