RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 PIBF1Q8WXW3 757 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 MAP3K2Q9Y2U5 619 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 EMILIN1Q9Y6C2 1016 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 PRC1O43663 620 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 KRT13P13646 458 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 ATP2A2P16615 1042 aaKnown RBP8.3□□□□□ -1.08
CDH8-214ENST00000585315 DNM1Q05193 864 aaKnown RBP8.3□□□□□ -1.08
CDH8-214ENST00000585315 DHX32Q7L7V1 743 aaKnown RBP8.3□□□□□ -1.08
CDH8-214ENST00000585315 GPATCH11Q8N954 259 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 PTCD1O75127 700 aaKnown RBP8.3□□□□□ -1.08
CDH8-214ENST00000585315 RILPL1Q5EBL4 403 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 HS2ST1Q7LGA3 356 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 ANKIB1Q9P2G1 1089 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 TTF2Q9UNY4 1162 aaKnown RBP8.3□□□□□ -1.08
CDH8-214ENST00000585315 AOX1Q06278 1338 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 GNA11P29992 359 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 MKRN1Q9UHC7 482 aaKnown RBP8.3□□□□□ -1.08
CDH8-214ENST00000585315 RTL9Q8NET4 1388 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 GIGYF1O75420 1035 aaPredicted RBP8.3□□□□□ -1.08
CDH8-214ENST00000585315 ARHGAP25P42331 645 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 SH3BGRP55822 239 aaPredicted RBP8.3□□□□□ -1.08
CDH8-214ENST00000585315 GRIPAP1Q4V328 841 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 MTUS1Q9ULD2 1270 aa8.3□□□□□ -1.08
CDH8-214ENST00000585315 ZBTB16Q05516 673 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 VWA3BQ502W6 1294 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 DAAM2Q86T65 1068 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 NME9Q86XW9 330 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 FERMT2Q96AC1 680 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 MPHOSPH6Q99547 160 aaKnown RBP8.29□□□□□ -1.08
CDH8-214ENST00000585315 CALCOCO2Q13137 446 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 PHF8Q9UPP1 1060 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 RPL13P26373 211 aaKnown RBP8.29□□□□□ -1.08
CDH8-214ENST00000585315 PPP2R5BQ15173 497 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 CCDC114Q96M63 670 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 ZBTB40Q9NUA8 1239 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 ELP1O95163 1332 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 LACTBP83111 547 aaPredicted RBP8.29□□□□□ -1.08
CDH8-214ENST00000585315 GBP6Q6ZN66 633 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 PPFIBP2Q8ND30 876 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 TRERF1Q96PN7 1200 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 IMPG2Q9BZV3 1241 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 ITSN2Q9NZM3 1697 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 KSR2Q6VAB6 950 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 MSANTD4Q8NCY6 345 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 BABAM1Q9NWV8 329 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 ZFYVE9O95405 1425 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 HMGB1P1B2RPK0 211 aaPredicted RBP8.29□□□□□ -1.08
CDH8-214ENST00000585315 DNAJC21Q5F1R6 531 aaKnown RBP8.29□□□□□ -1.08
CDH8-214ENST00000585315 CSRNP2Q9H175 543 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 ARHGAP6O43182 974 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 CCDC26Q8TAB7 109 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 CCDC85AQ96PX6 553 aaPredicted RBP8.29□□□□□ -1.08
CDH8-214ENST00000585315 MEIS3Q99687 375 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 STX8Q9UNK0 236 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 ADGRL1O94910 1474 aa8.29□□□□□ -1.08
CDH8-214ENST00000585315 A0A1B0GUL7 405 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 LIG1P18858 919 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 RUFY4Q6ZNE9 571 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 BAG1Q99933 345 aaPredicted RBP8.28□□□□□ -1.08
CDH8-214ENST00000585315 ACTN4O43707 911 aaKnown RBP8.28□□□□□ -1.08
CDH8-214ENST00000585315 IFIT1BQ5T764 474 aaKnown RBP8.28□□□□□ -1.08
CDH8-214ENST00000585315 MYRIPQ8NFW9 859 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 NEK11Q8NG66 645 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 ASIC1P78348 528 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 PPFIA1Q13136 1202 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 ATP2B3Q16720 1220 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 C10orf67Q8IYJ2 551 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 MICALL1Q8N3F8 863 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 PLCG2P16885 1265 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 SF3B2Q13435 895 aaKnown RBP8.28□□□□□ -1.08
CDH8-214ENST00000585315 NAP1L4Q99733 375 aaKnown RBP8.28□□□□□ -1.08
CDH8-214ENST00000585315 PPP2R3AQ06190 1150 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 GPR161Q8N6U8 529 aaKnown RBP8.28□□□□□ -1.08
CDH8-214ENST00000585315 USH1CQ9Y6N9 552 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 KRT79Q5XKE5 535 aa8.28□□□□□ -1.08
CDH8-214ENST00000585315 AKR1B15C9JRZ8 316 aaPredicted RBP8.28□□□□□ -1.08
CDH8-214ENST00000585315 ZC3H6P61129 1189 aaKnown RBP8.27□□□□□ -1.08
CDH8-214ENST00000585315 CEP57Q86XR8 500 aa8.27□□□□□ -1.08
CDH8-214ENST00000585315 GLT8D2Q9H1C3 349 aa8.27□□□□□ -1.08
CDH8-214ENST00000585315 C6orf50Q9HD87 102 aa8.27□□□□□ -1.08
CDH8-214ENST00000585315 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.27□□□□□ -1.08
CDH8-214ENST00000585315 MAPK8IP2Q13387 824 aaPredicted RBP8.27□□□□□ -1.09
CDH8-214ENST00000585315 CCDC14Q49A88 953 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 CCDC152Q4G0S7 254 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 MPRIPQ6WCQ1 1025 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 EVCP57679 992 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 IRX3P78415 501 aaPredicted RBP8.27□□□□□ -1.09
CDH8-214ENST00000585315 Q6ZUG5 572 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 SCLT1Q96NL6 688 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 NKIRAS1Q9NYS0 192 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 DISP3Q9P2K9 1392 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 ADGRF5Q8IZF2 1346 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 NDC80O14777 642 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 PPP2R5EQ16537 467 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 CCDC84Q86UT8 332 aaPredicted RBP8.27□□□□□ -1.09
CDH8-214ENST00000585315 VPS18Q9P253 973 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 PABPN1LA6NDY0 278 aaKnown RBP8.27□□□□□ -1.09
CDH8-214ENST00000585315 RAPGEF3O95398 923 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 PTGS1P23219 599 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms