RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 RBM26Q5T8P6 1007 aaKnown RBP25.67■■□□□ 1.7
SS18-224ENST00000584083 FBXW7Q969H0 707 aa25.67■■□□□ 1.7
SS18-224ENST00000584083 SNAP23O00161 211 aa25.66■■□□□ 1.7
SS18-224ENST00000584083 RABL6Q3YEC7 729 aaPredicted RBP25.66■■□□□ 1.7
SS18-224ENST00000584083 ANKRD44Q8N8A2 993 aa25.66■■□□□ 1.7
SS18-224ENST00000584083 ZC3H15Q8WU90 426 aaKnown RBP25.66■■□□□ 1.7
SS18-224ENST00000584083 TRPM7Q96QT4 1865 aa25.66■■□□□ 1.7
SS18-224ENST00000584083 AGBL3Q8NEM8 1001 aa25.65■■□□□ 1.7
SS18-224ENST00000584083 PGAP2Q9UHJ9 254 aa25.65■■□□□ 1.7
SS18-224ENST00000584083 POLR2AP24928 1970 aaKnown RBP25.64■■□□□ 1.7
SS18-224ENST00000584083 TRAF5O00463 557 aa25.64■■□□□ 1.7
SS18-224ENST00000584083 FMR1Q06787 632 aaKnown RBP eCLIP25.64■■□□□ 1.7
SS18-224ENST00000584083 MKRN1Q9UHC7 482 aaKnown RBP25.64■■□□□ 1.7
SS18-224ENST00000584083 EGFRP00533 1210 aa25.63■■□□□ 1.69
SS18-224ENST00000584083 ARHGAP45Q92619 1136 aa25.63■■□□□ 1.69
SS18-224ENST00000584083 PUS3Q9BZE2 481 aaKnown RBP25.63■■□□□ 1.69
SS18-224ENST00000584083 IPO8O15397 1037 aaKnown RBP25.62■■□□□ 1.69
SS18-224ENST00000584083 UBTFL1P0CB47 393 aaPredicted RBP25.62■■□□□ 1.69
SS18-224ENST00000584083 KIF4BQ2VIQ3 1234 aa25.62■■□□□ 1.69
SS18-224ENST00000584083 GLIS2Q9BZE0 524 aaPredicted RBP25.62■■□□□ 1.69
SS18-224ENST00000584083 BCAR3O75815 825 aa25.61■■□□□ 1.69
SS18-224ENST00000584083 USP17L8P0C7I0 530 aa25.61■■□□□ 1.69
SS18-224ENST00000584083 DACT2Q5SW24 774 aa25.61■■□□□ 1.69
SS18-224ENST00000584083 STRIP1Q5VSL9 837 aa25.61■■□□□ 1.69
SS18-224ENST00000584083 TTLL5Q6EMB2 1281 aa25.61■■□□□ 1.69
SS18-224ENST00000584083 C15orf52Q6ZUT6 534 aaKnown RBP25.61■■□□□ 1.69
SS18-224ENST00000584083 JMYQ8N9B5 988 aa25.61■■□□□ 1.69
SS18-224ENST00000584083 FRAT1Q92837 279 aaPredicted RBP25.61■■□□□ 1.69
SS18-224ENST00000584083 GMLQ99445 158 aa25.61■■□□□ 1.69
SS18-224ENST00000584083 ZNF609O15014 1411 aa25.61■■□□□ 1.69
SS18-224ENST00000584083 ZNF280AP59817 542 aaPredicted RBP25.6■■□□□ 1.69
SS18-224ENST00000584083 CDC37L1Q7L3B6 337 aa25.6■■□□□ 1.69
SS18-224ENST00000584083 ZNF804AQ7Z570 1209 aa25.6■■□□□ 1.69
SS18-224ENST00000584083 MXD3Q9BW11 206 aa25.6■■□□□ 1.69
SS18-224ENST00000584083 CD209Q9NNX6 404 aa25.6■■□□□ 1.69
SS18-224ENST00000584083 ABT1Q9ULW3 272 aaKnown RBP25.6■■□□□ 1.69
SS18-224ENST00000584083 RIPOR2Q9Y4F9 1068 aa25.6■■□□□ 1.69
SS18-224ENST00000584083 ZBED9Q6R2W3 1325 aa25.6■■□□□ 1.69
SS18-224ENST00000584083 GTF2IP78347 998 aa25.59■■□□□ 1.69
SS18-224ENST00000584083 HDAC5Q9UQL6 1122 aa25.59■■□□□ 1.69
SS18-224ENST00000584083 MROH5Q6ZUA9 1318 aa25.59■■□□□ 1.69
SS18-224ENST00000584083 IRS2Q9Y4H2 1338 aa25.59■■□□□ 1.69
SS18-224ENST00000584083 ZNF646O15015 1829 aaPredicted RBP25.58■■□□□ 1.69
SS18-224ENST00000584083 USP48Q86UV5 1035 aa25.58■■□□□ 1.69
SS18-224ENST00000584083 KLHDC4Q8TBB5 520 aa25.58■■□□□ 1.69
SS18-224ENST00000584083 DCPSQ96C86 337 aaKnown RBP25.58■■□□□ 1.69
SS18-224ENST00000584083 MYO3BQ8WXR4 1341 aa25.58■■□□□ 1.69
SS18-224ENST00000584083 CNTNAP1P78357 1384 aa25.57■■□□□ 1.68
SS18-224ENST00000584083 UBE4AQ14139 1066 aa25.57■■□□□ 1.68
SS18-224ENST00000584083 LRRC24Q50LG9 513 aa25.57■■□□□ 1.68
SS18-224ENST00000584083 METTL24Q5JXM2 366 aa25.57■■□□□ 1.68
SS18-224ENST00000584083 INTS3Q68E01 1043 aaKnown RBP25.57■■□□□ 1.68
SS18-224ENST00000584083 OGFOD1Q8N543 542 aa25.57■■□□□ 1.68
SS18-224ENST00000584083 MYOZ2Q9NPC6 264 aa25.57■■□□□ 1.68
SS18-224ENST00000584083 CST9Q5W186 159 aa25.56■■□□□ 1.68
SS18-224ENST00000584083 ATF7IPQ6VMQ6 1270 aa25.56■■□□□ 1.68
SS18-224ENST00000584083 KRT26Q7Z3Y9 468 aa25.56■■□□□ 1.68
SS18-224ENST00000584083 ZNF408Q9H9D4 720 aa25.56■■□□□ 1.68
SS18-224ENST00000584083 CELF2O95319 508 aaKnown RBP25.55■■□□□ 1.68
SS18-224ENST00000584083 TRIM27P14373 513 aa25.55■■□□□ 1.68
SS18-224ENST00000584083 DEFB115Q30KQ5 88 aa25.55■■□□□ 1.68
SS18-224ENST00000584083 MEIS3Q99687 375 aa25.55■■□□□ 1.68
SS18-224ENST00000584083 LRRFIP2Q9Y608 721 aaKnown RBP25.55■■□□□ 1.68
SS18-224ENST00000584083 SCARF1Q14162 830 aa25.54■■□□□ 1.68
SS18-224ENST00000584083 GGA3Q9NZ52 723 aa25.54■■□□□ 1.68
SS18-224ENST00000584083 IL1R1P14778 569 aa25.53■■□□□ 1.68
SS18-224ENST00000584083 CLUAP1Q96AJ1 413 aa25.53■■□□□ 1.68
SS18-224ENST00000584083 TNNQ9UQP3 1299 aa25.53■■□□□ 1.68
SS18-224ENST00000584083 ASTN2O75129 1339 aaPredicted RBP25.53■■□□□ 1.68
SS18-224ENST00000584083 RASSF10A6NK89 507 aa25.52■■□□□ 1.68
SS18-224ENST00000584083 GNAI3P08754 354 aa25.52■■□□□ 1.68
SS18-224ENST00000584083 HIBADHP31937 336 aaKnown RBP25.52■■□□□ 1.68
SS18-224ENST00000584083 GYG1P46976 350 aa25.52■■□□□ 1.68
SS18-224ENST00000584083 RFX5P48382 616 aaPredicted RBP25.52■■□□□ 1.68
SS18-224ENST00000584083 VEGFBP49765 207 aa25.52■■□□□ 1.68
SS18-224ENST00000584083 ZKSCAN2Q63HK3 967 aa25.52■■□□□ 1.68
SS18-224ENST00000584083 KIAA0825Q8IV33 1275 aa25.52■■□□□ 1.68
SS18-224ENST00000584083 SULF1Q8IWU6 871 aa25.52■■□□□ 1.68
SS18-224ENST00000584083 HDAC9Q9UKV0 1011 aa25.52■■□□□ 1.68
SS18-224ENST00000584083 ADM5C9JUS6 153 aa25.51■■□□□ 1.67
SS18-224ENST00000584083 PDE8BO95263 885 aa25.51■■□□□ 1.67
SS18-224ENST00000584083 ANGEL2Q5VTE6 544 aaKnown RBP25.51■■□□□ 1.67
SS18-224ENST00000584083 DLK2Q6UY11 383 aa25.51■■□□□ 1.67
SS18-224ENST00000584083 EYA2O00167 538 aa25.5■■□□□ 1.67
SS18-224ENST00000584083 PTPN12Q05209 780 aaKnown RBP25.5■■□□□ 1.67
SS18-224ENST00000584083 PAXIP1Q6ZW49 1069 aaPredicted RBP25.5■■□□□ 1.67
SS18-224ENST00000584083 FAM84BQ96KN1 310 aaPredicted RBP25.5■■□□□ 1.67
SS18-224ENST00000584083 JAG2Q9Y219 1238 aa25.5■■□□□ 1.67
SS18-224ENST00000584083 MMP14P50281 582 aa25.49■■□□□ 1.67
SS18-224ENST00000584083 VPS37DQ86XT2 251 aa25.49■■□□□ 1.67
SS18-224ENST00000584083 SIL1Q9H173 461 aa25.49■■□□□ 1.67
SS18-224ENST00000584083 TLL2Q9Y6L7 1015 aa25.49■■□□□ 1.67
SS18-224ENST00000584083 SASH1O94885 1247 aa25.48■■□□□ 1.67
SS18-224ENST00000584083 NBPF9Q3BBW0 867 aa25.48■■□□□ 1.67
SS18-224ENST00000584083 VGLL2Q8N8G2 317 aa25.48■■□□□ 1.67
SS18-224ENST00000584083 CAVIN4Q5BKX8 364 aa25.47■■□□□ 1.67
SS18-224ENST00000584083 CERS5Q8N5B7 392 aa25.47■■□□□ 1.67
SS18-224ENST00000584083 TDRD7Q8NHU6 1098 aaKnown RBP25.47■■□□□ 1.67
SS18-224ENST00000584083 F8W031 263 aaPredicted RBP25.46■■□□□ 1.67
SS18-224ENST00000584083 HSPA1AP0DMV8 641 aaKnown RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms