RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 USP17L8P0C7I0 530 aa28.3■■■□□ 2.12
CASC3-207ENST00000581849 MMP14P50281 582 aa28.3■■■□□ 2.12
CASC3-207ENST00000581849 CHRNDQ07001 517 aa28.3■■■□□ 2.12
CASC3-207ENST00000581849 SLFN5Q08AF3 891 aa28.3■■■□□ 2.12
CASC3-207ENST00000581849 KRT26Q7Z3Y9 468 aa28.3■■■□□ 2.12
CASC3-207ENST00000581849 USP48Q86UV5 1035 aa28.3■■■□□ 2.12
CASC3-207ENST00000581849 ZNF646O15015 1829 aaPredicted RBP28.29■■■□□ 2.12
CASC3-207ENST00000581849 RBM26Q5T8P6 1007 aaKnown RBP28.29■■■□□ 2.12
CASC3-207ENST00000581849 STRIP1Q5VSL9 837 aa28.29■■■□□ 2.12
CASC3-207ENST00000581849 SLC4A10Q6U841 1118 aa28.29■■■□□ 2.12
CASC3-207ENST00000581849 MRPL50Q8N5N7 158 aaKnown RBP28.29■■■□□ 2.12
CASC3-207ENST00000581849 POLR2AP24928 1970 aaKnown RBP28.29■■■□□ 2.12
CASC3-207ENST00000581849 FOXN1O15353 648 aa28.28■■■□□ 2.12
CASC3-207ENST00000581849 LMBR1LQ6UX01 489 aa28.28■■■□□ 2.12
CASC3-207ENST00000581849 C15orf52Q6ZUT6 534 aaKnown RBP28.28■■■□□ 2.12
CASC3-207ENST00000581849 A0A1B0GUL6 1792 aa28.28■■■□□ 2.12
CASC3-207ENST00000581849 UTYO14607 1347 aa28.27■■■□□ 2.12
CASC3-207ENST00000581849 CTCFP49711 727 aaPredicted RBP28.27■■■□□ 2.12
CASC3-207ENST00000581849 CCDC57Q2TAC2 916 aa28.27■■■□□ 2.12
CASC3-207ENST00000581849 DACT2Q5SW24 774 aa28.27■■■□□ 2.12
CASC3-207ENST00000581849 PAXIP1Q6ZW49 1069 aaPredicted RBP28.27■■■□□ 2.12
CASC3-207ENST00000581849 PRDM10Q9NQV6 1147 aa28.27■■■□□ 2.12
CASC3-207ENST00000581849 MAP2K2P36507 400 aa28.26■■■□□ 2.11
CASC3-207ENST00000581849 KCNJ4P48050 445 aa28.26■■■□□ 2.11
CASC3-207ENST00000581849 EPHA10Q5JZY3 1008 aa28.26■■■□□ 2.11
CASC3-207ENST00000581849 CYP4F22Q6NT55 531 aa28.26■■■□□ 2.11
CASC3-207ENST00000581849 TXNRD3Q86VQ6 643 aa28.26■■■□□ 2.11
CASC3-207ENST00000581849 SULF1Q8IWU6 871 aa28.26■■■□□ 2.11
CASC3-207ENST00000581849 ZNF408Q9H9D4 720 aa28.26■■■□□ 2.11
CASC3-207ENST00000581849 GGA3Q9NZ52 723 aa28.26■■■□□ 2.11
CASC3-207ENST00000581849 CHMP3Q9Y3E7 222 aa28.26■■■□□ 2.11
CASC3-207ENST00000581849 PITPNM2Q9BZ72 1349 aa28.25■■■□□ 2.11
CASC3-207ENST00000581849 TNS4Q8IZW8 715 aa28.25■■■□□ 2.11
CASC3-207ENST00000581849 MYOZ2Q9NPC6 264 aa28.25■■■□□ 2.11
CASC3-207ENST00000581849 ALDH1L2Q3SY69 923 aa28.24■■■□□ 2.11
CASC3-207ENST00000581849 IRS2Q9Y4H2 1338 aa28.23■■■□□ 2.11
CASC3-207ENST00000581849 OGFOD1Q8N543 542 aa28.23■■■□□ 2.11
CASC3-207ENST00000581849 ADM5C9JUS6 153 aa28.22■■■□□ 2.11
CASC3-207ENST00000581849 CT47B1P0C2W7 299 aaPredicted RBP28.22■■■□□ 2.11
CASC3-207ENST00000581849 KLRK1P26718 216 aa28.22■■■□□ 2.11
CASC3-207ENST00000581849 SCARF1Q14162 830 aa28.22■■■□□ 2.11
CASC3-207ENST00000581849 TAF7LQ5H9L4 462 aa28.22■■■□□ 2.11
CASC3-207ENST00000581849 TRMT2AQ8IZ69 625 aaKnown RBP28.22■■■□□ 2.11
CASC3-207ENST00000581849 SSH1Q8WYL5 1049 aa28.22■■■□□ 2.11
CASC3-207ENST00000581849 TTLL5Q6EMB2 1281 aa28.21■■■□□ 2.11
CASC3-207ENST00000581849 LDHAL6AQ6ZMR3 332 aa28.21■■■□□ 2.11
CASC3-207ENST00000581849 GBA2Q9HCG7 927 aaPredicted RBP28.21■■■□□ 2.11
CASC3-207ENST00000581849 CD209Q9NNX6 404 aa28.21■■■□□ 2.11
CASC3-207ENST00000581849 ANGEL2Q5VTE6 544 aaKnown RBP28.2■■■□□ 2.1
CASC3-207ENST00000581849 C2orf69Q8N8R5 385 aa28.2■■■□□ 2.1
CASC3-207ENST00000581849 SUCLG2Q96I99 432 aa28.2■■■□□ 2.1
CASC3-207ENST00000581849 NBPF7P0C2Y1 421 aaPredicted RBP28.19■■■□□ 2.1
CASC3-207ENST00000581849 HUNKP57058 714 aa28.19■■■□□ 2.1
CASC3-207ENST00000581849 RABL6Q3YEC7 729 aaPredicted RBP28.19■■■□□ 2.1
CASC3-207ENST00000581849 KAZALD1Q96I82 304 aa28.19■■■□□ 2.1
CASC3-207ENST00000581849 BEGAINQ9BUH8 593 aa28.19■■■□□ 2.1
CASC3-207ENST00000581849 CNNM1Q9NRU3 951 aa28.19■■■□□ 2.1
CASC3-207ENST00000581849 ASTN2O75129 1339 aaPredicted RBP28.18■■■□□ 2.1
CASC3-207ENST00000581849 TAF5LO75529 589 aa28.18■■■□□ 2.1
CASC3-207ENST00000581849 GRM1Q13255 1194 aa28.18■■■□□ 2.1
CASC3-207ENST00000581849 FBXW7Q969H0 707 aa28.18■■■□□ 2.1
CASC3-207ENST00000581849 CDCA7LQ96GN5 454 aa28.18■■■□□ 2.1
CASC3-207ENST00000581849 ZNF804AQ7Z570 1209 aa28.17■■■□□ 2.1
CASC3-207ENST00000581849 HELBQ8NG08 1087 aaPredicted RBP28.17■■■□□ 2.1
CASC3-207ENST00000581849 CDCA5Q96FF9 252 aa28.17■■■□□ 2.1
CASC3-207ENST00000581849 ZNF594Q96JF6 807 aaPredicted RBP28.17■■■□□ 2.1
CASC3-207ENST00000581849 HSPA8P11142 646 aaKnown RBP28.16■■■□□ 2.1
CASC3-207ENST00000581849 IL1R1P14778 569 aa28.16■■■□□ 2.1
CASC3-207ENST00000581849 GTF2IP78347 998 aa28.16■■■□□ 2.1
CASC3-207ENST00000581849 NOGQ13253 232 aa28.16■■■□□ 2.1
CASC3-207ENST00000581849 DLK2Q6UY11 383 aa28.16■■■□□ 2.1
CASC3-207ENST00000581849 MXD3Q9BW11 206 aa28.16■■■□□ 2.1
CASC3-207ENST00000581849 HDAC9Q9UKV0 1011 aa28.16■■■□□ 2.1
CASC3-207ENST00000581849 CA12O43570 354 aa28.15■■■□□ 2.1
CASC3-207ENST00000581849 BRPF1P55201 1214 aaPredicted RBP28.15■■■□□ 2.1
CASC3-207ENST00000581849 FKBP1AP62942 108 aaKnown RBP28.15■■■□□ 2.1
CASC3-207ENST00000581849 FKBP1BP68106 108 aa28.15■■■□□ 2.1
CASC3-207ENST00000581849 SNAP23O00161 211 aa28.14■■■□□ 2.1
CASC3-207ENST00000581849 AOC2O75106 756 aa28.14■■■□□ 2.1
CASC3-207ENST00000581849 LBX1P52954 281 aa28.14■■■□□ 2.1
CASC3-207ENST00000581849 UBE4AQ14139 1066 aa28.14■■■□□ 2.1
CASC3-207ENST00000581849 RGMBQ6NW40 437 aa28.14■■■□□ 2.1
CASC3-207ENST00000581849 WNT10BO00744 389 aa28.13■■■□□ 2.09
CASC3-207ENST00000581849 CCDC102AQ96A19 550 aa28.13■■■□□ 2.09
CASC3-207ENST00000581849 BICC1Q9H694 974 aaKnown RBP28.13■■■□□ 2.09
CASC3-207ENST00000581849 SMC4Q9NTJ3 1288 aa28.13■■■□□ 2.09
CASC3-207ENST00000581849 PAPPA2Q9BXP8 1791 aa28.12■■■□□ 2.09
CASC3-207ENST00000581849 NBPF9Q3BBW0 867 aa28.12■■■□□ 2.09
CASC3-207ENST00000581849 MROH5Q6ZUA9 1318 aa28.12■■■□□ 2.09
CASC3-207ENST00000581849 KIAA0825Q8IV33 1275 aa28.11■■■□□ 2.09
CASC3-207ENST00000581849 ANKRD44Q8N8A2 993 aa28.11■■■□□ 2.09
CASC3-207ENST00000581849 ZBED3Q96IU2 234 aaPredicted RBP28.11■■■□□ 2.09
CASC3-207ENST00000581849 USP44Q9H0E7 712 aa28.11■■■□□ 2.09
CASC3-207ENST00000581849 RIPOR2Q9Y4F9 1068 aa28.11■■■□□ 2.09
CASC3-207ENST00000581849 FAM155AB1AL88 458 aaPredicted RBP28.09■■■□□ 2.09
CASC3-207ENST00000581849 MTMR14Q8NCE2 650 aa28.09■■■□□ 2.09
CASC3-207ENST00000581849 PLIN1O60240 522 aa28.08■■■□□ 2.09
CASC3-207ENST00000581849 APOBEC3FQ8IUX4 373 aaKnown RBP28.08■■■□□ 2.09
CASC3-207ENST00000581849 SASH1O94885 1247 aa28.07■■■□□ 2.08
CASC3-207ENST00000581849 CERS5Q8N5B7 392 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms