RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 DPYDQ12882 1025 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 PDXDC2PQ6P474 469 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 USP44Q9H0E7 712 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 CHPF2Q9P2E5 772 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 REREQ9P2R6 1566 aa6.47□□□□□ -1.37
VAPA-203ENST00000577539 KIAA1211Q6ZU35 1233 aa6.46□□□□□ -1.37
VAPA-203ENST00000577539 TMX3Q96JJ7 454 aa6.46□□□□□ -1.37
VAPA-203ENST00000577539 C9orf78Q9NZ63 289 aaPredicted RBP6.46□□□□□ -1.37
VAPA-203ENST00000577539 PALD1Q9ULE6 856 aa6.46□□□□□ -1.37
VAPA-203ENST00000577539 DLG5Q8TDM6 1919 aa6.46□□□□□ -1.37
VAPA-203ENST00000577539 NPR3P17342 541 aa6.46□□□□□ -1.38
VAPA-203ENST00000577539 WEE1P30291 646 aa6.46□□□□□ -1.38
VAPA-203ENST00000577539 KLHL40Q2TBA0 621 aa6.46□□□□□ -1.38
VAPA-203ENST00000577539 C1orf141Q5JVX7 400 aa6.46□□□□□ -1.38
VAPA-203ENST00000577539 NBPF6Q5VWK0 638 aa6.46□□□□□ -1.38
VAPA-203ENST00000577539 UNC5CLQ8IV45 518 aa6.46□□□□□ -1.38
VAPA-203ENST00000577539 NBPF4Q96M43 638 aa6.46□□□□□ -1.38
VAPA-203ENST00000577539 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
VAPA-203ENST00000577539 CHMLP26374 656 aa6.46□□□□□ -1.38
VAPA-203ENST00000577539 AIMP1Q12904 312 aaKnown RBP6.46□□□□□ -1.38
VAPA-203ENST00000577539 CXXC1Q9P0U4 656 aaPredicted RBP6.46□□□□□ -1.38
VAPA-203ENST00000577539 ISY1Q9ULR0 285 aaKnown RBP6.46□□□□□ -1.38
VAPA-203ENST00000577539 ITSN1Q15811 1721 aa6.46□□□□□ -1.38
VAPA-203ENST00000577539 NBPF7P0C2Y1 421 aaPredicted RBP6.45□□□□□ -1.38
VAPA-203ENST00000577539 ARID4AP29374 1257 aaPredicted RBP6.45□□□□□ -1.38
VAPA-203ENST00000577539 ZNF687Q8N1G0 1237 aa6.45□□□□□ -1.38
VAPA-203ENST00000577539 DNAAF4Q8WXU2 420 aa6.45□□□□□ -1.38
VAPA-203ENST00000577539 ESPNB1AK53 854 aa6.45□□□□□ -1.38
VAPA-203ENST00000577539 PLEKHO1Q53GL0 409 aaPredicted RBP6.45□□□□□ -1.38
VAPA-203ENST00000577539 RHPN1Q8TCX5 695 aa6.45□□□□□ -1.38
VAPA-203ENST00000577539 OSBPL3Q9H4L5 887 aa6.45□□□□□ -1.38
VAPA-203ENST00000577539 SETD1AO15047 1707 aaKnown RBP6.45□□□□□ -1.38
VAPA-203ENST00000577539 CEP170BQ9Y4F5 1589 aaPredicted RBP6.45□□□□□ -1.38
VAPA-203ENST00000577539 KDRP35968 1356 aa6.45□□□□□ -1.38
VAPA-203ENST00000577539 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.45□□□□□ -1.38
VAPA-203ENST00000577539 KCNJ4P48050 445 aa6.45□□□□□ -1.38
VAPA-203ENST00000577539 MRPL58Q14197 206 aaKnown RBP6.45□□□□□ -1.38
VAPA-203ENST00000577539 FAM26DQ5JW98 314 aa6.45□□□□□ -1.38
VAPA-203ENST00000577539 CWC27Q6UX04 472 aaKnown RBP6.45□□□□□ -1.38
VAPA-203ENST00000577539 OGFOD1Q8N543 542 aa6.45□□□□□ -1.38
VAPA-203ENST00000577539 SPATA32Q96LK8 384 aa6.45□□□□□ -1.38
VAPA-203ENST00000577539 MON2Q7Z3U7 1717 aa6.45□□□□□ -1.38
VAPA-203ENST00000577539 C3P01024 1663 aa6.45□□□□□ -1.38
VAPA-203ENST00000577539 ANKLE2Q86XL3 938 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 RNF214Q8ND24 703 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 IP6K1Q92551 441 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 EGFL7Q9UHF1 273 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 SOS1Q07889 1333 aaPredicted RBP6.44□□□□□ -1.38
VAPA-203ENST00000577539 DTNBO60941 627 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 ATP2B4P23634 1241 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 KIF1BPQ96EK5 621 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 DIAPH3Q9NSV4 1193 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 LMBRD1Q9NUN5 540 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 IBTKQ9P2D0 1353 aaPredicted RBP6.44□□□□□ -1.38
VAPA-203ENST00000577539 ANKRD33BA6NCL7 494 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 MCM2P49736 904 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 EPHA4P54764 986 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 CC2D2BQ6DHV5 1058 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 DDX54Q8TDD1 881 aaKnown RBP6.44□□□□□ -1.38
VAPA-203ENST00000577539 SPG7Q9UQ90 795 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 SSH2Q76I76 1423 aa6.44□□□□□ -1.38
VAPA-203ENST00000577539 IFIT2P09913 472 aaKnown RBP6.43□□□□□ -1.38
VAPA-203ENST00000577539 EIF4A1P60842 406 aaKnown RBP6.43□□□□□ -1.38
VAPA-203ENST00000577539 ZSCAN23Q3MJ62 389 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 CNTROBQ8N137 903 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 CLASRPQ8N2M8 674 aaKnown RBP6.43□□□□□ -1.38
VAPA-203ENST00000577539 KNDC1Q76NI1 1749 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 SETD1BQ9UPS6 1966 aaKnown RBP6.43□□□□□ -1.38
VAPA-203ENST00000577539 SYCE3A1L190 88 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 ATP5J2-PTCD1G3V325 749 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 RAB11FIP3O75154 756 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 ZC3H6P61129 1189 aaKnown RBP6.43□□□□□ -1.38
VAPA-203ENST00000577539 ADAM32Q8TC27 787 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 SSH3Q8TE77 659 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 ORAI2Q96SN7 254 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 PA2G4Q9UQ80 394 aaKnown RBP6.43□□□□□ -1.38
VAPA-203ENST00000577539 MAP3K2Q9Y2U5 619 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 DNMT3AQ9Y6K1 912 aaPredicted RBP6.43□□□□□ -1.38
VAPA-203ENST00000577539 SOWAHBA6NEL2 793 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 TK2O00142 265 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 RASA1P20936 1047 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 CWF19L2Q2TBE0 894 aaKnown RBP6.43□□□□□ -1.38
VAPA-203ENST00000577539 KCNH5Q8NCM2 988 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 SIL1Q9H173 461 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 ZDHHC9Q9Y397 364 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 PEAK1Q9H792 1746 aa6.43□□□□□ -1.38
VAPA-203ENST00000577539 MSNP26038 577 aaKnown RBP6.42□□□□□ -1.38
VAPA-203ENST00000577539 HSP90AB4PQ58FF6 505 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 RIMS1Q86UR5 1692 aaKnown RBP6.42□□□□□ -1.38
VAPA-203ENST00000577539 ICMTO60725 284 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 GCP02774 474 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 CPA1P15085 419 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 CCDC173Q0VFZ6 552 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 GRIPAP1Q4V328 841 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 LARGE2Q8N3Y3 721 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 ZNF592Q92610 1267 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 IL25Q9H293 177 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 NLRP2Q9NX02 1062 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 DBF4Q9UBU7 674 aaPredicted RBP6.42□□□□□ -1.38
VAPA-203ENST00000577539 AK9Q5TCS8 1911 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms