RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 USP17L3A6NCW0 530 aa33.1■■■□□ 2.89
PPP4R1-204ENST00000577393 USP17L4A6NCW7 530 aa33.1■■■□□ 2.89
PPP4R1-204ENST00000577393 USP17L1Q7RTZ2 530 aa33.1■■■□□ 2.89
PPP4R1-204ENST00000577393 RIPOR2Q9Y4F9 1068 aa33.1■■■□□ 2.89
PPP4R1-204ENST00000577393 A0A1B0GUL6 1792 aa33.1■■■□□ 2.89
PPP4R1-204ENST00000577393 RSBN1LQ6PCB5 846 aaPredicted RBP33.09■■■□□ 2.89
PPP4R1-204ENST00000577393 TRPM4Q8TD43 1214 aa33.09■■■□□ 2.89
PPP4R1-204ENST00000577393 MEIS3Q99687 375 aa33.09■■■□□ 2.89
PPP4R1-204ENST00000577393 IRS2Q9Y4H2 1338 aa33.08■■■□□ 2.89
PPP4R1-204ENST00000577393 HIRAP54198 1017 aaPredicted RBP33.08■■■□□ 2.89
PPP4R1-204ENST00000577393 C15orf52Q6ZUT6 534 aaKnown RBP33.08■■■□□ 2.89
PPP4R1-204ENST00000577393 DNAJC5GQ8N7S2 189 aa33.08■■■□□ 2.89
PPP4R1-204ENST00000577393 CLUAP1Q96AJ1 413 aa33.08■■■□□ 2.89
PPP4R1-204ENST00000577393 ZKSCAN2Q63HK3 967 aa33.07■■■□□ 2.88
PPP4R1-204ENST00000577393 KLHDC4Q8TBB5 520 aa33.07■■■□□ 2.88
PPP4R1-204ENST00000577393 HDAC5Q9UQL6 1122 aa33.07■■■□□ 2.88
PPP4R1-204ENST00000577393 PSME4Q14997 1843 aa33.07■■■□□ 2.88
PPP4R1-204ENST00000577393 LRRC24Q50LG9 513 aa33.06■■■□□ 2.88
PPP4R1-204ENST00000577393 SAMD7Q7Z3H4 446 aa33.06■■■□□ 2.88
PPP4R1-204ENST00000577393 AGBL3Q8NEM8 1001 aa33.06■■■□□ 2.88
PPP4R1-204ENST00000577393 LRRFIP2Q9Y608 721 aaKnown RBP33.06■■■□□ 2.88
PPP4R1-204ENST00000577393 MROH5Q6ZUA9 1318 aa33.05■■■□□ 2.88
PPP4R1-204ENST00000577393 RFX5P48382 616 aaPredicted RBP33.05■■■□□ 2.88
PPP4R1-204ENST00000577393 FBXW7Q969H0 707 aa33.04■■■□□ 2.88
PPP4R1-204ENST00000577393 GMLQ99445 158 aa33.04■■■□□ 2.88
PPP4R1-204ENST00000577393 CD209Q9NNX6 404 aa33.04■■■□□ 2.88
PPP4R1-204ENST00000577393 ZNF609O15014 1411 aa33.03■■■□□ 2.88
PPP4R1-204ENST00000577393 UBE4AQ14139 1066 aa33.03■■■□□ 2.88
PPP4R1-204ENST00000577393 TBC1D10BQ4KMP7 808 aaPredicted RBP33.03■■■□□ 2.88
PPP4R1-204ENST00000577393 PGAP2Q9UHJ9 254 aa33.03■■■□□ 2.88
PPP4R1-204ENST00000577393 EGFRP00533 1210 aa33.02■■■□□ 2.88
PPP4R1-204ENST00000577393 GNAI3P08754 354 aa33.02■■■□□ 2.88
PPP4R1-204ENST00000577393 DACT2Q5SW24 774 aa33.02■■■□□ 2.88
PPP4R1-204ENST00000577393 RBM26Q5T8P6 1007 aaKnown RBP33.02■■■□□ 2.88
PPP4R1-204ENST00000577393 STRIP1Q5VSL9 837 aa33.02■■■□□ 2.88
PPP4R1-204ENST00000577393 ZC3H15Q8WU90 426 aaKnown RBP33.02■■■□□ 2.88
PPP4R1-204ENST00000577393 METTL24Q5JXM2 366 aa33.01■■■□□ 2.87
PPP4R1-204ENST00000577393 TTLL5Q6EMB2 1281 aa33.01■■■□□ 2.87
PPP4R1-204ENST00000577393 ZNF804AQ7Z570 1209 aa33.01■■■□□ 2.87
PPP4R1-204ENST00000577393 MXD3Q9BW11 206 aa33.01■■■□□ 2.87
PPP4R1-204ENST00000577393 CREBZFQ9NS37 354 aa33.01■■■□□ 2.87
PPP4R1-204ENST00000577393 PTPN12Q05209 780 aaKnown RBP33■■■□□ 2.87
PPP4R1-204ENST00000577393 TMEM57Q8N5G2 664 aa33■■■□□ 2.87
PPP4R1-204ENST00000577393 ZNF280AP59817 542 aaPredicted RBP32.99■■■□□ 2.87
PPP4R1-204ENST00000577393 USP17L8P0C7I0 530 aa32.98■■■□□ 2.87
PPP4R1-204ENST00000577393 GTF2IP78347 998 aa32.98■■■□□ 2.87
PPP4R1-204ENST00000577393 KIF4BQ2VIQ3 1234 aa32.98■■■□□ 2.87
PPP4R1-204ENST00000577393 KLRG1Q96E93 195 aa32.98■■■□□ 2.87
PPP4R1-204ENST00000577393 TMEM88BA6NKF7 163 aa32.97■■■□□ 2.87
PPP4R1-204ENST00000577393 EYA2O00167 538 aa32.97■■■□□ 2.87
PPP4R1-204ENST00000577393 IL1R1P14778 569 aa32.97■■■□□ 2.87
PPP4R1-204ENST00000577393 FMR1Q06787 632 aaKnown RBP eCLIP32.97■■■□□ 2.872e-6■■■□□ 18
PPP4R1-204ENST00000577393 VGLL2Q8N8G2 317 aa32.97■■■□□ 2.87
PPP4R1-204ENST00000577393 ZNF646O15015 1829 aaPredicted RBP32.96■■■□□ 2.87
PPP4R1-204ENST00000577393 TRAF5O00463 557 aa32.96■■■□□ 2.87
PPP4R1-204ENST00000577393 PDE8BO95263 885 aa32.96■■■□□ 2.87
PPP4R1-204ENST00000577393 MYO3BQ8WXR4 1341 aa32.96■■■□□ 2.87
PPP4R1-204ENST00000577393 GLIS2Q9BZE0 524 aaPredicted RBP32.95■■■□□ 2.87
PPP4R1-204ENST00000577393 GYG1P46976 350 aa32.94■■■□□ 2.86
PPP4R1-204ENST00000577393 FTSJ3Q8IY81 847 aaKnown RBP32.94■■■□□ 2.86
PPP4R1-204ENST00000577393 DZIP1LQ8IYY4 767 aaKnown RBP32.94■■■□□ 2.86
PPP4R1-204ENST00000577393 FAM84BQ96KN1 310 aaPredicted RBP32.94■■■□□ 2.86
PPP4R1-204ENST00000577393 ATG9AQ7Z3C6 839 aa32.93■■■□□ 2.86
PPP4R1-204ENST00000577393 SIL1Q9H173 461 aa32.93■■■□□ 2.86
PPP4R1-204ENST00000577393 MYOZ2Q9NPC6 264 aa32.93■■■□□ 2.86
PPP4R1-204ENST00000577393 HIBADHP31937 336 aaKnown RBP32.92■■■□□ 2.86
PPP4R1-204ENST00000577393 CDC37L1Q7L3B6 337 aa32.92■■■□□ 2.86
PPP4R1-204ENST00000577393 FBXO3Q9UK99 471 aa32.92■■■□□ 2.86
PPP4R1-204ENST00000577393 GNAI2P04899 355 aa32.91■■■□□ 2.86
PPP4R1-204ENST00000577393 RLBP1P12271 317 aa32.91■■■□□ 2.86
PPP4R1-204ENST00000577393 PA2G4Q9UQ80 394 aaKnown RBP32.91■■■□□ 2.86
PPP4R1-204ENST00000577393 CIAO1O76071 339 aa32.9■■■□□ 2.86
PPP4R1-204ENST00000577393 OGFOD1Q8N543 542 aa32.9■■■□□ 2.86
PPP4R1-204ENST00000577393 TDRD7Q8NHU6 1098 aaKnown RBP32.9■■■□□ 2.86
PPP4R1-204ENST00000577393 ASTN2O75129 1339 aaPredicted RBP32.89■■■□□ 2.86
PPP4R1-204ENST00000577393 MTX1Q13505 466 aa32.89■■■□□ 2.86
PPP4R1-204ENST00000577393 SCARF1Q14162 830 aa32.89■■■□□ 2.86
PPP4R1-204ENST00000577393 USP48Q86UV5 1035 aa32.89■■■□□ 2.86
PPP4R1-204ENST00000577393 KIAA0825Q8IV33 1275 aa32.89■■■□□ 2.86
PPP4R1-204ENST00000577393 COPRSQ9NQ92 184 aa32.89■■■□□ 2.86
PPP4R1-204ENST00000577393 SRGAP3O43295 1099 aa32.88■■■□□ 2.85
PPP4R1-204ENST00000577393 SASH1O94885 1247 aa32.88■■■□□ 2.85
PPP4R1-204ENST00000577393 FGFR2P21802 821 aa32.88■■■□□ 2.85
PPP4R1-204ENST00000577393 PUM3Q15397 648 aaKnown RBP32.88■■■□□ 2.85
PPP4R1-204ENST00000577393 CST9Q5W186 159 aa32.88■■■□□ 2.85
PPP4R1-204ENST00000577393 FBXO33Q7Z6M2 555 aa32.88■■■□□ 2.85
PPP4R1-204ENST00000577393 CERS5Q8N5B7 392 aa32.88■■■□□ 2.85
PPP4R1-204ENST00000577393 DCPSQ96C86 337 aaKnown RBP32.88■■■□□ 2.85
PPP4R1-204ENST00000577393 MKRN1Q9UHC7 482 aaKnown RBP32.88■■■□□ 2.85
PPP4R1-204ENST00000577393 JAG2Q9Y219 1238 aa32.88■■■□□ 2.85
PPP4R1-204ENST00000577393 KRT26Q7Z3Y9 468 aa32.87■■■□□ 2.85
PPP4R1-204ENST00000577393 ITPRIPQ8IWB1 547 aa32.87■■■□□ 2.85
PPP4R1-204ENST00000577393 GGA3Q9NZ52 723 aa32.87■■■□□ 2.85
PPP4R1-204ENST00000577393 POLR2AP24928 1970 aaKnown RBP32.87■■■□□ 2.85
PPP4R1-204ENST00000577393 MMP14P50281 582 aa32.86■■■□□ 2.85
PPP4R1-204ENST00000577393 CAVIN4Q5BKX8 364 aa32.86■■■□□ 2.85
PPP4R1-204ENST00000577393 VPS37DQ86XT2 251 aa32.86■■■□□ 2.85
PPP4R1-204ENST00000577393 FAM205AQ6ZU69 1335 aa32.85■■■□□ 2.85
PPP4R1-204ENST00000577393 TRPM7Q96QT4 1865 aa32.85■■■□□ 2.85
PPP4R1-204ENST00000577393 IFIT1P09914 478 aaKnown RBP32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms