RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 GAS2L1Q99501 681 aaPredicted RBP11.88□□□□□ -0.51
CALCOCO2-226ENST00000575461 TLR7Q9NYK1 1049 aaKnown RBP11.88□□□□□ -0.51
CALCOCO2-226ENST00000575461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.88□□□□□ -0.51
CALCOCO2-226ENST00000575461 U2SURPO15042 1029 aaKnown RBP11.87□□□□□ -0.51
CALCOCO2-226ENST00000575461 GREM1O60565 184 aa11.87□□□□□ -0.51
CALCOCO2-226ENST00000575461 HOXD8P13378 290 aaPredicted RBP11.87□□□□□ -0.51
CALCOCO2-226ENST00000575461 HSD3B2P26439 372 aa11.87□□□□□ -0.51
CALCOCO2-226ENST00000575461 LMNB2Q03252 620 aa11.87□□□□□ -0.51
CALCOCO2-226ENST00000575461 ANKS3Q6ZW76 656 aa11.87□□□□□ -0.51
CALCOCO2-226ENST00000575461 CPLX3Q8WVH0 158 aa11.87□□□□□ -0.51
CALCOCO2-226ENST00000575461 OSMRQ99650 979 aa11.87□□□□□ -0.51
CALCOCO2-226ENST00000575461 ZKSCAN3Q9BRR0 538 aa11.87□□□□□ -0.51
CALCOCO2-226ENST00000575461 TRIM55Q9BYV6 548 aa11.87□□□□□ -0.51
CALCOCO2-226ENST00000575461 PCDHGC4Q9Y5F7 938 aa11.87□□□□□ -0.51
CALCOCO2-226ENST00000575461 FBXO24O75426 580 aa11.86□□□□□ -0.51
CALCOCO2-226ENST00000575461 TPTE2Q6XPS3 522 aa11.86□□□□□ -0.51
CALCOCO2-226ENST00000575461 MAP3K6O95382 1288 aa11.85□□□□□ -0.51
CALCOCO2-226ENST00000575461 PF4P02776 101 aa11.85□□□□□ -0.51
CALCOCO2-226ENST00000575461 GARTP22102 1010 aa11.85□□□□□ -0.51
CALCOCO2-226ENST00000575461 ITPKAP23677 461 aa11.85□□□□□ -0.51
CALCOCO2-226ENST00000575461 ETFBP38117 255 aa11.85□□□□□ -0.51
CALCOCO2-226ENST00000575461 PLAURQ03405 335 aa11.85□□□□□ -0.51
CALCOCO2-226ENST00000575461 SNAP47Q5SQN1 464 aa11.85□□□□□ -0.51
CALCOCO2-226ENST00000575461 ZFATQ9P243 1243 aa11.85□□□□□ -0.51
CALCOCO2-226ENST00000575461 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.85□□□□□ -0.51
CALCOCO2-226ENST00000575461 CAMK2GQ13555 558 aaPredicted RBP11.84□□□□□ -0.51
CALCOCO2-226ENST00000575461 TCEAL1Q15170 157 aa11.84□□□□□ -0.51
CALCOCO2-226ENST00000575461 RPS26P11Q5JNZ5 115 aaPredicted RBP11.84□□□□□ -0.51
CALCOCO2-226ENST00000575461 SPACA7Q96KW9 195 aa11.84□□□□□ -0.51
CALCOCO2-226ENST00000575461 CNTNAP3BQ96NU0 1288 aa11.84□□□□□ -0.51
CALCOCO2-226ENST00000575461 CNTNAP3Q9BZ76 1288 aa11.84□□□□□ -0.51
CALCOCO2-226ENST00000575461 R3HCC1Q9Y3T6 440 aaKnown RBP11.84□□□□□ -0.51
CALCOCO2-226ENST00000575461 ROBO2Q9HCK4 1378 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 KHNYNO15037 678 aaKnown RBP11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 KLF4O43474 513 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 CELA3AP09093 270 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 NFKB1P19838 968 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 RPS26P62854 115 aaKnown RBP11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 FAM160A1Q05DH4 1040 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 APOBRQ0VD83 1088 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 RAB33AQ14088 237 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.83□□□□□ -0.526e-9■■□□□ 11.8
CALCOCO2-226ENST00000575461 PCNX4Q63HM2 1172 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 LRP10Q7Z4F1 713 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 GOLM1Q8NBJ4 401 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 NKD1Q969G9 470 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 BHLHE41Q9C0J9 482 aaPredicted RBP11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 PRKAG3Q9UGI9 489 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 TLR6Q9Y2C9 796 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 MRVI1Q9Y6F6 885 aa11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 MRPL42Q9Y6G3 142 aaKnown RBP11.83□□□□□ -0.52
CALCOCO2-226ENST00000575461 AGMOQ6ZNB7 445 aa11.82□□□□□ -0.52
CALCOCO2-226ENST00000575461 CEP120Q8N960 986 aa11.82□□□□□ -0.52
CALCOCO2-226ENST00000575461 NECAB3Q96P71 396 aaPredicted RBP11.82□□□□□ -0.52
CALCOCO2-226ENST00000575461 SRPK1Q96SB4 655 aaKnown RBP11.82□□□□□ -0.52
CALCOCO2-226ENST00000575461 SRRTQ9BXP5 876 aaKnown RBP11.82□□□□□ -0.52
CALCOCO2-226ENST00000575461 DZANK1Q9NVP4 752 aa11.82□□□□□ -0.52
CALCOCO2-226ENST00000575461 PLA2G2EQ9NZK7 142 aa11.82□□□□□ -0.52
CALCOCO2-226ENST00000575461 GRIA4P48058 902 aa11.81□□□□□ -0.52
CALCOCO2-226ENST00000575461 TNP2Q05952 138 aa11.81□□□□□ -0.52
CALCOCO2-226ENST00000575461 COL13A1Q5TAT6 717 aaPredicted RBP11.81□□□□□ -0.52
CALCOCO2-226ENST00000575461 TTBK2Q6IQ55 1244 aa11.81□□□□□ -0.52
CALCOCO2-226ENST00000575461 SLITRK4Q8IW52 837 aa11.81□□□□□ -0.52
CALCOCO2-226ENST00000575461 UBP1Q9NZI7 540 aa11.81□□□□□ -0.52
CALCOCO2-226ENST00000575461 SPEM2Q0P670 501 aa11.8□□□□□ -0.52
CALCOCO2-226ENST00000575461 TNNI3KQ59H18 835 aa11.8□□□□□ -0.52
CALCOCO2-226ENST00000575461 CCDC84Q86UT8 332 aaPredicted RBP11.8□□□□□ -0.52
CALCOCO2-226ENST00000575461 TMEM102Q8N9M5 508 aaPredicted RBP11.8□□□□□ -0.52
CALCOCO2-226ENST00000575461 MARK1Q9P0L2 795 aa11.8□□□□□ -0.52
CALCOCO2-226ENST00000575461 DCDC2BA2VCK2 349 aa11.79□□□□□ -0.52
CALCOCO2-226ENST00000575461 ENPP3O14638 875 aa11.79□□□□□ -0.52
CALCOCO2-226ENST00000575461 ENC1O14682 589 aa11.79□□□□□ -0.52
CALCOCO2-226ENST00000575461 AVPP01185 164 aa11.79□□□□□ -0.52
CALCOCO2-226ENST00000575461 DIEXFQ68CQ4 756 aaKnown RBP11.79□□□□□ -0.52
CALCOCO2-226ENST00000575461 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
CALCOCO2-226ENST00000575461 ANAPC16Q96DE5 110 aa11.79□□□□□ -0.52
CALCOCO2-226ENST00000575461 SEC31BQ9NQW1 1179 aa11.79□□□□□ -0.52
CALCOCO2-226ENST00000575461 DNMT3LQ9UJW3 386 aa11.79□□□□□ -0.52
CALCOCO2-226ENST00000575461 A0A096LPE4 126 aa11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 A0A1W2PPZ6 126 aa11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 H7C1W4 665 aa11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 MAPTP10636 758 aaKnown RBP11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 ACPPP15309 386 aa11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 TFE3P19532 575 aaPredicted RBP11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 NRLP54845 237 aa11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 GRIN2CQ14957 1233 aa11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 DHX32Q7L7V1 743 aaKnown RBP11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 TRIM46Q7Z4K8 759 aa11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 TRIM42Q8IWZ5 723 aa11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 HNRNPLLQ8WVV9 542 aaKnown RBP11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 NXPE3Q969Y0 559 aa11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 LRRC3Q9BY71 257 aa11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 SAMM50Q9Y512 469 aa11.78□□□□□ -0.52
CALCOCO2-226ENST00000575461 BMP1P13497 986 aa11.77□□□□□ -0.53
CALCOCO2-226ENST00000575461 LMNB1P20700 586 aa11.77□□□□□ -0.53
CALCOCO2-226ENST00000575461 SPRED3Q2MJR0 410 aa11.77□□□□□ -0.53
CALCOCO2-226ENST00000575461 RIPOR1Q6ZS17 1223 aa11.77□□□□□ -0.53
CALCOCO2-226ENST00000575461 DEPDC7Q96QD5 511 aa11.77□□□□□ -0.53
CALCOCO2-226ENST00000575461 NUCKS1Q9H1E3 243 aaKnown RBP11.77□□□□□ -0.53
CALCOCO2-226ENST00000575461 ZNF576Q9H609 170 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms