RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 FER1L6Q2WGJ9 1857 aa11.25□□□□□ -0.61
CHD9-219ENST00000569225 FGFR2P21802 821 aa11.24□□□□□ -0.61
CHD9-219ENST00000569225 KIF1BPQ96EK5 621 aa11.24□□□□□ -0.61
CHD9-219ENST00000569225 LTBP1Q14766 1721 aa11.24□□□□□ -0.61
CHD9-219ENST00000569225 FZD9O00144 591 aa11.23□□□□□ -0.61
CHD9-219ENST00000569225 SNAP23O00161 211 aa11.23□□□□□ -0.61
CHD9-219ENST00000569225 ECE2O60344 883 aa11.23□□□□□ -0.61
CHD9-219ENST00000569225 SASH1O94885 1247 aa11.23□□□□□ -0.61
CHD9-219ENST00000569225 HIBADHP31937 336 aaKnown RBP11.23□□□□□ -0.61
CHD9-219ENST00000569225 DOK7Q18PE1 504 aa11.23□□□□□ -0.61
CHD9-219ENST00000569225 DPY19L2Q6NUT2 758 aa11.23□□□□□ -0.61
CHD9-219ENST00000569225 PODNQ7Z5L7 613 aa11.23□□□□□ -0.61
CHD9-219ENST00000569225 DCTPP1Q9H773 170 aa11.23□□□□□ -0.61
CHD9-219ENST00000569225 DBNDD1Q9H9R9 158 aa11.23□□□□□ -0.61
CHD9-219ENST00000569225 WTIPA6NIX2 430 aaPredicted RBP11.23□□□□□ -0.61
CHD9-219ENST00000569225 KLRK1P26718 216 aa11.23□□□□□ -0.61
CHD9-219ENST00000569225 TNIP1Q15025 636 aa11.23□□□□□ -0.61
CHD9-219ENST00000569225 RHPN1Q8TCX5 695 aa11.23□□□□□ -0.61
CHD9-219ENST00000569225 GNL3LQ9NVN8 582 aaKnown RBP11.23□□□□□ -0.61
CHD9-219ENST00000569225 ZBTB47Q9UFB7 747 aaPredicted RBP11.23□□□□□ -0.61
CHD9-219ENST00000569225 IRS2Q9Y4H2 1338 aa11.22□□□□□ -0.61
CHD9-219ENST00000569225 SPEF2Q9C093 1822 aa11.22□□□□□ -0.61
CHD9-219ENST00000569225 A0A1B0GUL7 405 aa11.22□□□□□ -0.61
CHD9-219ENST00000569225 APBB1O00213 710 aa11.22□□□□□ -0.61
CHD9-219ENST00000569225 TNNI3KQ59H18 835 aa11.22□□□□□ -0.61
CHD9-219ENST00000569225 GORABQ5T7V8 394 aa11.22□□□□□ -0.61
CHD9-219ENST00000569225 TXNRD3Q86VQ6 643 aa11.22□□□□□ -0.61
CHD9-219ENST00000569225 CLASRPQ8N2M8 674 aaKnown RBP11.22□□□□□ -0.61
CHD9-219ENST00000569225 GCC1Q96CN9 775 aa11.22□□□□□ -0.61
CHD9-219ENST00000569225 NEUROD6Q96NK8 337 aa11.22□□□□□ -0.61
CHD9-219ENST00000569225 LRRCC1Q9C099 1032 aa11.22□□□□□ -0.61
CHD9-219ENST00000569225 FPGT-TNNI3KV9GXZ4 949 aa11.22□□□□□ -0.61
CHD9-219ENST00000569225 GYG1P46976 350 aa11.21□□□□□ -0.61
CHD9-219ENST00000569225 FAM84BQ96KN1 310 aaPredicted RBP11.21□□□□□ -0.61
CHD9-219ENST00000569225 CD209Q9NNX6 404 aa11.21□□□□□ -0.61
CHD9-219ENST00000569225 KDM2BQ8NHM5 1336 aa11.21□□□□□ -0.62
CHD9-219ENST00000569225 ZNF609O15014 1411 aa11.21□□□□□ -0.62
CHD9-219ENST00000569225 FRAT2O75474 233 aaPredicted RBP11.21□□□□□ -0.62
CHD9-219ENST00000569225 IL1R1P14778 569 aa11.21□□□□□ -0.62
CHD9-219ENST00000569225 YY1P25490 414 aa11.21□□□□□ -0.62
CHD9-219ENST00000569225 TIMM10P62072 90 aa11.21□□□□□ -0.62
CHD9-219ENST00000569225 CIAPIN1Q6FI81 312 aa11.21□□□□□ -0.62
CHD9-219ENST00000569225 FBXO33Q7Z6M2 555 aa11.21□□□□□ -0.62
CHD9-219ENST00000569225 GPC2Q8N158 579 aa11.21□□□□□ -0.62
CHD9-219ENST00000569225 USP17L3A6NCW0 530 aa11.2□□□□□ -0.62
CHD9-219ENST00000569225 USP17L4A6NCW7 530 aa11.2□□□□□ -0.62
CHD9-219ENST00000569225 RAD17O75943 681 aa11.2□□□□□ -0.62
CHD9-219ENST00000569225 BCAMP50895 628 aa11.2□□□□□ -0.62
CHD9-219ENST00000569225 USP17L1Q7RTZ2 530 aa11.2□□□□□ -0.62
CHD9-219ENST00000569225 AACSQ86V21 672 aa11.2□□□□□ -0.62
CHD9-219ENST00000569225 XAGE2Q96GT9 111 aa11.2□□□□□ -0.62
CHD9-219ENST00000569225 ZNF541Q9H0D2 1346 aa11.2□□□□□ -0.62
CHD9-219ENST00000569225 GLTPD2A6NH11 291 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 YDJCA8MPS7 323 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 SEMA3EO15041 775 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 IFIT2P09913 472 aaKnown RBP11.19□□□□□ -0.62
CHD9-219ENST00000569225 CXCL9Q07325 125 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 CCDC158Q5M9N0 1113 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 STRIP1Q5VSL9 837 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 ERICH6BQ5W0A0 696 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 FBXW7Q969H0 707 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 IL1RAPL2Q9NP60 686 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 GJA3Q9Y6H8 435 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 COL4A5P29400 1685 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 UTRNP46939 3433 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 UQCRFS1P1P0C7P4 283 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 ADORA1P30542 326 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 CCDC102BQ68D86 513 aa11.19□□□□□ -0.62
CHD9-219ENST00000569225 TDRD7Q8NHU6 1098 aaKnown RBP11.19□□□□□ -0.62
CHD9-219ENST00000569225 EAF2Q96CJ1 260 aaPredicted RBP11.19□□□□□ -0.62
CHD9-219ENST00000569225 MYO3BQ8WXR4 1341 aa11.18□□□□□ -0.62
CHD9-219ENST00000569225 ZBTB22O15209 634 aa11.18□□□□□ -0.62
CHD9-219ENST00000569225 RPS12P25398 132 aaKnown RBP11.18□□□□□ -0.62
CHD9-219ENST00000569225 TTC39AQ5SRH9 613 aa11.18□□□□□ -0.62
CHD9-219ENST00000569225 TTLL5Q6EMB2 1281 aa11.18□□□□□ -0.62
CHD9-219ENST00000569225 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.18□□□□□ -0.62
CHD9-219ENST00000569225 PSMD14O00487 310 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 VIL1P09327 827 aaKnown RBP11.17□□□□□ -0.62
CHD9-219ENST00000569225 LMOD1P29536 600 aaPredicted RBP11.17□□□□□ -0.62
CHD9-219ENST00000569225 PHKA1P46020 1223 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 GTF2IP78347 998 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 RSBN1LQ6PCB5 846 aaPredicted RBP11.17□□□□□ -0.62
CHD9-219ENST00000569225 SMC5Q8IY18 1101 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 TBC1D22AQ8WUA7 517 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 GPATCH3Q96I76 525 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 DBNDD2Q9BQY9 259 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 CCDC8Q9H0W5 538 aaPredicted RBP11.17□□□□□ -0.62
CHD9-219ENST00000569225 BCL11AQ9H165 835 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 DBNLQ9UJU6 430 aaKnown RBP11.17□□□□□ -0.62
CHD9-219ENST00000569225 DENND2AQ9ULE3 1009 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 FAM205AQ6ZU69 1335 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 A0A1B0GUL6 1792 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 IQCA1LA6NCM1 817 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 DDNO94850 711 aaPredicted RBP11.17□□□□□ -0.62
CHD9-219ENST00000569225 IGHDP01880 384 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 FKBP1AP62942 108 aaKnown RBP11.17□□□□□ -0.62
CHD9-219ENST00000569225 DACT2Q5SW24 774 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 ANKRD45Q5TZF3 282 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 AGBL3Q8NEM8 1001 aa11.17□□□□□ -0.62
CHD9-219ENST00000569225 WDR66Q8TBY9 1149 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms