RNA–Protein interactions for RNA: ENST00000563253.5

NAE1-211, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-211ENST00000563253 TPSG1Q9NRR2 321 aa8.03□□□□□ -1.12
NAE1-211ENST00000563253 FOXD3Q9UJU5 478 aaPredicted RBP8.03□□□□□ -1.12
NAE1-211ENST00000563253 EREGO14944 169 aa8.02□□□□□ -1.13
NAE1-211ENST00000563253 CDC27P30260 824 aa8.02□□□□□ -1.13
NAE1-211ENST00000563253 CCER1Q8TC90 406 aaPredicted RBP8.02□□□□□ -1.13
NAE1-211ENST00000563253 POP1Q99575 1024 aaKnown RBP8.02□□□□□ -1.13
NAE1-211ENST00000563253 DZANK1Q9NVP4 752 aa8.02□□□□□ -1.13
NAE1-211ENST00000563253 BRPF3Q9ULD4 1205 aa8.02□□□□□ -1.13
NAE1-211ENST00000563253 LINC01387J3KSC0 135 aa8.01□□□□□ -1.13
NAE1-211ENST00000563253 NFKBIEO00221 500 aa8.01□□□□□ -1.13
NAE1-211ENST00000563253 PTPRAP18433 802 aa8.01□□□□□ -1.13
NAE1-211ENST00000563253 DCAF11Q8TEB1 546 aa8.01□□□□□ -1.13
NAE1-211ENST00000563253 EPHA1P21709 976 aa8□□□□□ -1.13
NAE1-211ENST00000563253 TXNDC11Q6PKC3 985 aa8□□□□□ -1.13
NAE1-211ENST00000563253 ADAM19Q9H013 955 aa8□□□□□ -1.13
NAE1-211ENST00000563253 SH2B1Q9NRF2 756 aaPredicted RBP8□□□□□ -1.13
NAE1-211ENST00000563253 FAM177BA6PVY3 158 aa7.99□□□□□ -1.13
NAE1-211ENST00000563253 PDE2AO00408 941 aaPredicted RBP7.99□□□□□ -1.13
NAE1-211ENST00000563253 NDUFB5O43674 189 aa7.99□□□□□ -1.13
NAE1-211ENST00000563253 TRPA1O75762 1119 aa7.99□□□□□ -1.13
NAE1-211ENST00000563253 BRD1O95696 1058 aa7.99□□□□□ -1.13
NAE1-211ENST00000563253 EDN3P14138 238 aa7.99□□□□□ -1.13
NAE1-211ENST00000563253 RSPO4Q2I0M5 234 aaPredicted RBP7.99□□□□□ -1.13
NAE1-211ENST00000563253 NKAPLQ5M9Q1 402 aa7.99□□□□□ -1.13
NAE1-211ENST00000563253 GALNT11Q8NCW6 608 aa7.99□□□□□ -1.13
NAE1-211ENST00000563253 MRPL18Q9H0U6 180 aaKnown RBP7.99□□□□□ -1.13
NAE1-211ENST00000563253 ZFYVE28Q9HCC9 887 aa7.99□□□□□ -1.13
NAE1-211ENST00000563253 AMOTL2Q9Y2J4 779 aa7.99□□□□□ -1.13
NAE1-211ENST00000563253 NOS3P29474 1203 aa7.98□□□□□ -1.13
NAE1-211ENST00000563253 CDC25BP30305 580 aa7.98□□□□□ -1.13
NAE1-211ENST00000563253 TMEM102Q8N9M5 508 aaPredicted RBP7.98□□□□□ -1.13
NAE1-211ENST00000563253 WFDC12Q8WWY7 111 aa7.98□□□□□ -1.13
NAE1-211ENST00000563253 HHIPQ96QV1 700 aa7.98□□□□□ -1.13
NAE1-211ENST00000563253 OSMRQ99650 979 aa7.98□□□□□ -1.13
NAE1-211ENST00000563253 ZKSCAN3Q9BRR0 538 aa7.98□□□□□ -1.13
NAE1-211ENST00000563253 SSBP4Q9BWG4 385 aaPredicted RBP7.98□□□□□ -1.13
NAE1-211ENST00000563253 IREB2P48200 963 aaKnown RBP7.97□□□□□ -1.13
NAE1-211ENST00000563253 FAM117BQ6P1L5 589 aa7.97□□□□□ -1.13
NAE1-211ENST00000563253 FAM129BQ96TA1 746 aa7.97□□□□□ -1.13
NAE1-211ENST00000563253 SEMA6BQ9H3T3 888 aa7.97□□□□□ -1.13
NAE1-211ENST00000563253 GNEQ9Y223 722 aaKnown RBP7.97□□□□□ -1.13
NAE1-211ENST00000563253 SOWAHDA6NJG2 315 aa7.96□□□□□ -1.14
NAE1-211ENST00000563253 H3BRJ5 948 aa7.96□□□□□ -1.14
NAE1-211ENST00000563253 TM4SF5O14894 197 aa7.96□□□□□ -1.14
NAE1-211ENST00000563253 FSCN2O14926 492 aa7.96□□□□□ -1.14
NAE1-211ENST00000563253 CABP4P57796 275 aa7.96□□□□□ -1.14
NAE1-211ENST00000563253 PDE3BQ13370 1112 aa7.96□□□□□ -1.14
NAE1-211ENST00000563253 PEAR1Q5VY43 1037 aaPredicted RBP7.96□□□□□ -1.14
NAE1-211ENST00000563253 TMEM130Q8N3G9 435 aa7.96□□□□□ -1.14
NAE1-211ENST00000563253 KLHL23Q8NBE8 558 aa7.96□□□□□ -1.14
NAE1-211ENST00000563253 NXPE3Q969Y0 559 aa7.96□□□□□ -1.14
NAE1-211ENST00000563253 CITED4Q96RK1 184 aa7.96□□□□□ -1.14
NAE1-211ENST00000563253 CARD10Q9BWT7 1032 aa7.96□□□□□ -1.14
NAE1-211ENST00000563253 AKTIPQ9H8T0 292 aa7.96□□□□□ -1.14
NAE1-211ENST00000563253 LATS2Q9NRM7 1088 aa7.96□□□□□ -1.14
NAE1-211ENST00000563253 F8W735 103 aaPredicted RBP7.95□□□□□ -1.14
NAE1-211ENST00000563253 DYRK3O43781 588 aa7.95□□□□□ -1.14
NAE1-211ENST00000563253 POLR3DP05423 398 aaPredicted RBP7.95□□□□□ -1.14
NAE1-211ENST00000563253 ITGB7P26010 798 aa7.95□□□□□ -1.14
NAE1-211ENST00000563253 CD68P34810 354 aaPredicted RBP7.95□□□□□ -1.14
NAE1-211ENST00000563253 FOXD4L6Q3SYB3 417 aaPredicted RBP7.95□□□□□ -1.14
NAE1-211ENST00000563253 FOXD4L3Q6VB84 417 aaPredicted RBP7.95□□□□□ -1.14
NAE1-211ENST00000563253 TP53INP1Q96A56 240 aa7.95□□□□□ -1.14
NAE1-211ENST00000563253 SOX13Q9UN79 622 aa7.95□□□□□ -1.14
NAE1-211ENST00000563253 ALX3O95076 343 aa7.94□□□□□ -1.14
NAE1-211ENST00000563253 MEGF10Q96KG7 1140 aa7.94□□□□□ -1.14
NAE1-211ENST00000563253 BHLHE41Q9C0J9 482 aaPredicted RBP7.94□□□□□ -1.14
NAE1-211ENST00000563253 SEC31BQ9NQW1 1179 aa7.94□□□□□ -1.14
NAE1-211ENST00000563253 KCNK4Q9NYG8 393 aa7.94□□□□□ -1.14
NAE1-211ENST00000563253 NEFLP07196 543 aa7.93□□□□□ -1.14
NAE1-211ENST00000563253 H2AFB1P0C5Y9 115 aa7.93□□□□□ -1.14
NAE1-211ENST00000563253 H2AFB2P0C5Z0 115 aa7.93□□□□□ -1.14
NAE1-211ENST00000563253 PIP4K2BP78356 416 aa7.93□□□□□ -1.14
NAE1-211ENST00000563253 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.93□□□□□ -1.14
NAE1-211ENST00000563253 GALNT12Q8IXK2 581 aa7.93□□□□□ -1.14
NAE1-211ENST00000563253 BSNDQ8WZ55 320 aa7.93□□□□□ -1.14
NAE1-211ENST00000563253 WNT8BQ93098 351 aa7.93□□□□□ -1.14
NAE1-211ENST00000563253 GPR182O15218 404 aa7.92□□□□□ -1.14
NAE1-211ENST00000563253 WISP1O95388 367 aa7.92□□□□□ -1.14
NAE1-211ENST00000563253 IGHA2P01877 340 aa7.92□□□□□ -1.14
NAE1-211ENST00000563253 ORC1Q13415 861 aa7.92□□□□□ -1.14
NAE1-211ENST00000563253 Q6ZS46 218 aa7.92□□□□□ -1.14
NAE1-211ENST00000563253 DZIP1LQ8IYY4 767 aaKnown RBP7.92□□□□□ -1.14
NAE1-211ENST00000563253 AGGF1Q8N302 714 aaeCLIP7.92□□□□□ -1.14
NAE1-211ENST00000563253 KLHDC7BQ96G42 594 aa7.92□□□□□ -1.14
NAE1-211ENST00000563253 RBCK1Q9BYM8 510 aa7.92□□□□□ -1.14
NAE1-211ENST00000563253 OSGEPQ9NPF4 335 aa7.92□□□□□ -1.14
NAE1-211ENST00000563253 LOC100996750A0A140TA64 210 aa7.91□□□□□ -1.14
NAE1-211ENST00000563253 ADAM11O75078 769 aa7.91□□□□□ -1.14
NAE1-211ENST00000563253 USPL1Q5W0Q7 1092 aa7.91□□□□□ -1.14
NAE1-211ENST00000563253 ACAD11Q709F0 780 aa7.91□□□□□ -1.14
NAE1-211ENST00000563253 VN1R5Q7Z5H4 357 aa7.91□□□□□ -1.14
NAE1-211ENST00000563253 TMC1Q8TDI8 760 aa7.91□□□□□ -1.14
NAE1-211ENST00000563253 ASAP3Q8TDY4 903 aa7.91□□□□□ -1.14
NAE1-211ENST00000563253 FOXD4L4Q8WXT5 416 aaPredicted RBP7.91□□□□□ -1.14
NAE1-211ENST00000563253 SLC7A3Q8WY07 619 aa7.91□□□□□ -1.14
NAE1-211ENST00000563253 KRTAP4-6Q9BYQ5 205 aa7.91□□□□□ -1.14
NAE1-211ENST00000563253 BIN2Q9UBW5 565 aaPredicted RBP7.91□□□□□ -1.14
NAE1-211ENST00000563253 A0A1W2PP55 124 aa7.9□□□□□ -1.14
NAE1-211ENST00000563253 DDX3YO15523 660 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms