RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 HMGB1P09429 215 aaKnown RBP11.67□□□□□ -0.54
SMG1-205ENST00000561947 FOXD4L6Q3SYB3 417 aaPredicted RBP11.67□□□□□ -0.54
SMG1-205ENST00000561947 FOXD4L3Q6VB84 417 aaPredicted RBP11.67□□□□□ -0.54
SMG1-205ENST00000561947 STOX1Q6ZVD7 989 aa11.67□□□□□ -0.54
SMG1-205ENST00000561947 TMEM87AQ8NBN3 555 aa11.67□□□□□ -0.54
SMG1-205ENST00000561947 OSBP2Q969R2 916 aa11.67□□□□□ -0.54
SMG1-205ENST00000561947 UTP14AQ9BVJ6 771 aaKnown RBP11.67□□□□□ -0.54
SMG1-205ENST00000561947 RBM27Q9P2N5 1060 aaKnown RBP11.67□□□□□ -0.54
SMG1-205ENST00000561947 NSFL1CQ9UNZ2 370 aaKnown RBP11.67□□□□□ -0.54
SMG1-205ENST00000561947 ATP6V1DQ9Y5K8 247 aa11.67□□□□□ -0.54
SMG1-205ENST00000561947 PDIA4P13667 645 aaKnown RBP11.66□□□□□ -0.54
SMG1-205ENST00000561947 Q6ZUG5 572 aa11.66□□□□□ -0.54
SMG1-205ENST00000561947 TMEM63CQ9P1W3 806 aa11.66□□□□□ -0.54
SMG1-205ENST00000561947 MROH5Q6ZUA9 1318 aa11.65□□□□□ -0.54
SMG1-205ENST00000561947 KCNQ2O43526 872 aa11.65□□□□□ -0.54
SMG1-205ENST00000561947 HCLS1P14317 486 aaPredicted RBP11.65□□□□□ -0.54
SMG1-205ENST00000561947 MCAMP43121 646 aa11.65□□□□□ -0.54
SMG1-205ENST00000561947 VPS72Q15906 364 aa11.65□□□□□ -0.54
SMG1-205ENST00000561947 FAM98CQ17RN3 349 aaKnown RBP11.65□□□□□ -0.54
SMG1-205ENST00000561947 USP48Q86UV5 1035 aa11.65□□□□□ -0.54
SMG1-205ENST00000561947 APPBP2Q92624 585 aa11.65□□□□□ -0.54
SMG1-205ENST00000561947 GDPD2Q9HCC8 539 aa11.65□□□□□ -0.54
SMG1-205ENST00000561947 MYO5AQ9Y4I1 1855 aaKnown RBP11.65□□□□□ -0.54
SMG1-205ENST00000561947 BCL9LQ86UU0 1499 aa11.65□□□□□ -0.54
SMG1-205ENST00000561947 WASHC4Q2M389 1173 aa11.65□□□□□ -0.54
SMG1-205ENST00000561947 PI16Q6UXB8 463 aa11.65□□□□□ -0.54
SMG1-205ENST00000561947 GTF3C6Q969F1 213 aa11.65□□□□□ -0.54
SMG1-205ENST00000561947 CNPY2Q9Y2B0 182 aa11.65□□□□□ -0.54
SMG1-205ENST00000561947 FAM177BA6PVY3 158 aa11.64□□□□□ -0.55
SMG1-205ENST00000561947 DTNBO60941 627 aa11.64□□□□□ -0.55
SMG1-205ENST00000561947 PDCP20941 246 aa11.64□□□□□ -0.55
SMG1-205ENST00000561947 PUM3Q15397 648 aaKnown RBP11.64□□□□□ -0.55
SMG1-205ENST00000561947 DHX32Q7L7V1 743 aaKnown RBP11.64□□□□□ -0.55
SMG1-205ENST00000561947 NIP7Q9Y221 180 aaKnown RBP eCLIP11.64□□□□□ -0.55
SMG1-205ENST00000561947 RTL9Q8NET4 1388 aa11.64□□□□□ -0.55
SMG1-205ENST00000561947 VPS37CA5D8V6 355 aaPredicted RBP11.64□□□□□ -0.55
SMG1-205ENST00000561947 E7EWF7 191 aa11.64□□□□□ -0.55
SMG1-205ENST00000561947 NTSR2O95665 410 aa11.64□□□□□ -0.55
SMG1-205ENST00000561947 HSP90B1P14625 803 aaKnown RBP11.64□□□□□ -0.55
SMG1-205ENST00000561947 FGFR2P21802 821 aa11.64□□□□□ -0.55
SMG1-205ENST00000561947 STK3Q13188 491 aa11.64□□□□□ -0.55
SMG1-205ENST00000561947 LARP1BQ659C4 914 aaKnown RBP11.64□□□□□ -0.55
SMG1-205ENST00000561947 C8orf37Q96NL8 207 aa11.64□□□□□ -0.55
SMG1-205ENST00000561947 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.64□□□□□ -0.555e-8■■■□□ 19.1
SMG1-205ENST00000561947 A0A0G2JLW4 131 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 UBAP1LF5GYI3 381 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 GADD45BO75293 160 aaPredicted RBP11.63□□□□□ -0.55
SMG1-205ENST00000561947 UQCRFS1P1P0C7P4 283 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 ARID4AP29374 1257 aaPredicted RBP11.63□□□□□ -0.55
SMG1-205ENST00000561947 TTF1Q15361 905 aaPredicted RBP11.63□□□□□ -0.55
SMG1-205ENST00000561947 ZSCAN25Q6NSZ9 544 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 LPIN2Q92539 896 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 NGLY1Q96IV0 654 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 CTNNA3Q9UI47 895 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 ZNF652Q9Y2D9 606 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 FOXP2O15409 715 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 EXOSC10Q01780 885 aaKnown RBP11.63□□□□□ -0.55
SMG1-205ENST00000561947 CCDC152Q4G0S7 254 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 CCDC102BQ68D86 513 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 BRF1Q92994 677 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 SYAP1Q96A49 352 aaPredicted RBP11.63□□□□□ -0.55
SMG1-205ENST00000561947 ATRNO75882 1429 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 DOCK2Q92608 1830 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 CASZ1Q86V15 1759 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 ADD2P35612 726 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 PHKA1P46020 1223 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 TTLL5Q6EMB2 1281 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 LINC00116Q8NCU8 138 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 LRRC2Q9BYS8 371 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 PUS7LQ9H0K6 701 aaKnown RBP11.63□□□□□ -0.55
SMG1-205ENST00000561947 SEC31BQ9NQW1 1179 aa11.63□□□□□ -0.55
SMG1-205ENST00000561947 SCN7AQ01118 1682 aa11.62□□□□□ -0.55
SMG1-205ENST00000561947 SLC5A1P13866 664 aa11.62□□□□□ -0.55
SMG1-205ENST00000561947 FGD1P98174 961 aa11.62□□□□□ -0.55
SMG1-205ENST00000561947 CSPP1Q1MSJ5 1256 aa11.62□□□□□ -0.55
SMG1-205ENST00000561947 LRSAM1Q6UWE0 723 aa11.62□□□□□ -0.55
SMG1-205ENST00000561947 HELBQ8NG08 1087 aaPredicted RBP11.62□□□□□ -0.55
SMG1-205ENST00000561947 MPHOSPH8Q99549 860 aa11.62□□□□□ -0.55
SMG1-205ENST00000561947 AGXT2Q9BYV1 514 aa11.62□□□□□ -0.55
SMG1-205ENST00000561947 PIH1D3Q9NQM4 214 aaKnown RBP11.62□□□□□ -0.55
SMG1-205ENST00000561947 PFKFB2O60825 505 aa11.62□□□□□ -0.55
SMG1-205ENST00000561947 NASPP49321 788 aaPredicted RBP11.62□□□□□ -0.55
SMG1-205ENST00000561947 CLEC4GQ6UXB4 293 aa11.62□□□□□ -0.55
SMG1-205ENST00000561947 CDC37L1Q7L3B6 337 aa11.62□□□□□ -0.55
SMG1-205ENST00000561947 BTAF1O14981 1849 aa11.61□□□□□ -0.55
SMG1-205ENST00000561947 THSD7AQ9UPZ6 1657 aa11.61□□□□□ -0.55
SMG1-205ENST00000561947 SYCE3A1L190 88 aa11.61□□□□□ -0.55
SMG1-205ENST00000561947 GPAA1O43292 621 aa11.61□□□□□ -0.55
SMG1-205ENST00000561947 FIBPO43427 364 aa11.61□□□□□ -0.55
SMG1-205ENST00000561947 UBE2HP62256 183 aa11.61□□□□□ -0.55
SMG1-205ENST00000561947 DNM1Q05193 864 aaKnown RBP11.61□□□□□ -0.55
SMG1-205ENST00000561947 UBE3CQ15386 1083 aa11.61□□□□□ -0.55
SMG1-205ENST00000561947 IMMTQ16891 758 aaKnown RBP11.61□□□□□ -0.55
SMG1-205ENST00000561947 CNTNAP4Q9C0A0 1308 aa11.61□□□□□ -0.55
SMG1-205ENST00000561947 A0A1B0GUL6 1792 aa11.61□□□□□ -0.55
SMG1-205ENST00000561947 NHSQ6T4R5 1651 aa11.61□□□□□ -0.55
SMG1-205ENST00000561947 JAK2O60674 1132 aa11.61□□□□□ -0.55
SMG1-205ENST00000561947 IGHMBP2P38935 993 aaKnown RBP11.61□□□□□ -0.55
SMG1-205ENST00000561947 SCRN1Q12765 414 aa11.61□□□□□ -0.55
SMG1-205ENST00000561947 FNBP4Q8N3X1 1017 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms