RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-204	ENST00000561869	RBSN	Q9H1K0	784 aa		4.62	□□□□□ -1.67
CHD9-204	ENST00000561869	TUT1	Q9H6E5	874 aa	Known RBP	4.62	□□□□□ -1.67
CHD9-204	ENST00000561869	FOXD3	Q9UJU5	478 aa	Predicted RBP	4.62	□□□□□ -1.67
CHD9-204	ENST00000561869	EREG	O14944	169 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	IGHA2	P01877	340 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	H2AFB1	P0C5Y9	115 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	H2AFB2	P0C5Z0	115 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	CES1	P23141	567 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	USP5	P45974	858 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	NRG1	Q02297	640 aa	Predicted RBP	4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	EHHADH	Q08426	723 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	AAMP	Q13685	434 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	SETDB1	Q15047	1291 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	NCAPG2	Q86XI2	1143 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	CACTIN-AS1	Q8N1I8	211 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	SPACA7	Q96KW9	195 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	ZFP64	Q9NPA5	681 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	DZANK1	Q9NVP4	752 aa		4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	GNE	Q9Y223	722 aa	Known RBP	4.61	□□□□□ -1.67
CHD9-204	ENST00000561869	TRPA1	O75762	1119 aa		4.6	□□□□□ -1.67
CHD9-204	ENST00000561869	BRD1	O95696	1058 aa		4.6	□□□□□ -1.67
CHD9-204	ENST00000561869	CEP135	Q66GS9	1140 aa		4.6	□□□□□ -1.67
CHD9-204	ENST00000561869	GLYCTK	Q8IVS8	523 aa		4.6	□□□□□ -1.67
CHD9-204	ENST00000561869	SNX29	Q8TEQ0	813 aa		4.6	□□□□□ -1.67
CHD9-204	ENST00000561869	PMEPA1	Q969W9	287 aa		4.6	□□□□□ -1.67
CHD9-204	ENST00000561869	HHIP	Q96QV1	700 aa		4.6	□□□□□ -1.67
CHD9-204	ENST00000561869	LACRT	Q9GZZ8	138 aa		4.6	□□□□□ -1.67
CHD9-204	ENST00000561869	ADAM19	Q9H013	955 aa		4.6	□□□□□ -1.67
CHD9-204	ENST00000561869	ZFYVE28	Q9HCC9	887 aa		4.6	□□□□□ -1.67
CHD9-204	ENST00000561869	SH2B1	Q9NRF2	756 aa	Predicted RBP	4.6	□□□□□ -1.67
CHD9-204	ENST00000561869	PPME1	Q9Y570	386 aa		4.6	□□□□□ -1.67
CHD9-204	ENST00000561869	SOWAHD	A6NJG2	315 aa		4.59	□□□□□ -1.67
CHD9-204	ENST00000561869	PHACTR2	O75167	634 aa		4.59	□□□□□ -1.67
CHD9-204	ENST00000561869	SMNDC1	O75940	238 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
CHD9-204	ENST00000561869	CDC27	P30260	824 aa		4.59	□□□□□ -1.67
CHD9-204	ENST00000561869	PEAR1	Q5VY43	1037 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD9-204	ENST00000561869	IGF2-AS	Q6U949	168 aa		4.59	□□□□□ -1.67
CHD9-204	ENST00000561869	GALNT11	Q8NCW6	608 aa		4.59	□□□□□ -1.67
CHD9-204	ENST00000561869	TTC16	Q8NEE8	873 aa		4.59	□□□□□ -1.67
CHD9-204	ENST00000561869	CCER1	Q8TC90	406 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD9-204	ENST00000561869	TP53INP1	Q96A56	240 aa		4.59	□□□□□ -1.67
CHD9-204	ENST00000561869	FAM129B	Q96TA1	746 aa		4.59	□□□□□ -1.67
CHD9-204	ENST00000561869	MUC3B	Q9H195	1237 aa		4.59	□□□□□ -1.67
CHD9-204	ENST00000561869	LINC01387	J3KSC0	135 aa		4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	PDE2A	O00408	941 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	EPHA1	P21709	976 aa		4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	KRTAP1-3	Q8IUG1	177 aa		4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	MAP4K3	Q8IVH8	894 aa		4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	TMEM102	Q8N9M5	508 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	NXPE3	Q969Y0	559 aa		4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	OSMR	Q99650	979 aa		4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	KRTAP4-12	Q9BQ66	201 aa		4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	ZKSCAN3	Q9BRR0	538 aa		4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	SRA1	Q9HD15	236 aa	Known RBP	4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	LATS2	Q9NRM7	1088 aa		4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	KCNK4	Q9NYG8	393 aa		4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	USP21	Q9UK80	565 aa		4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	BRPF3	Q9ULD4	1205 aa		4.58	□□□□□ -1.68
CHD9-204	ENST00000561869	HYAL3	O43820	417 aa	Predicted RBP	4.57	□□□□□ -1.68
CHD9-204	ENST00000561869	POLR3D	P05423	398 aa	Predicted RBP	4.57	□□□□□ -1.68
CHD9-204	ENST00000561869	PTPRA	P18433	802 aa		4.57	□□□□□ -1.68
CHD9-204	ENST00000561869	NOS3	P29474	1203 aa		4.57	□□□□□ -1.68
CHD9-204	ENST00000561869	IREB2	P48200	963 aa	Known RBP	4.57	□□□□□ -1.68
CHD9-204	ENST00000561869	LRP8	Q14114	963 aa		4.57	□□□□□ -1.68
CHD9-204	ENST00000561869	USPL1	Q5W0Q7	1092 aa		4.57	□□□□□ -1.68
CHD9-204	ENST00000561869	TXNDC11	Q6PKC3	985 aa		4.57	□□□□□ -1.68
CHD9-204	ENST00000561869	TMEM130	Q8N3G9	435 aa		4.57	□□□□□ -1.68
CHD9-204	ENST00000561869	WFDC12	Q8WWY7	111 aa		4.57	□□□□□ -1.68
CHD9-204	ENST00000561869	CITED4	Q96RK1	184 aa		4.57	□□□□□ -1.68
CHD9-204	ENST00000561869	RBCK1	Q9BYM8	510 aa		4.57	□□□□□ -1.68
CHD9-204	ENST00000561869	SOX13	Q9UN79	622 aa		4.57	□□□□□ -1.68
CHD9-204	ENST00000561869	AMOTL2	Q9Y2J4	779 aa		4.57	□□□□□ -1.68
CHD9-204	ENST00000561869		F8W735	103 aa	Predicted RBP	4.56	□□□□□ -1.68
CHD9-204	ENST00000561869	FSCN2	O14926	492 aa		4.56	□□□□□ -1.68
CHD9-204	ENST00000561869	GPR182	O15218	404 aa		4.56	□□□□□ -1.68
CHD9-204	ENST00000561869	NDUFB5	O43674	189 aa		4.56	□□□□□ -1.68
CHD9-204	ENST00000561869	EDN3	P14138	238 aa		4.56	□□□□□ -1.68
CHD9-204	ENST00000561869	CDC25B	P30305	580 aa		4.56	□□□□□ -1.68
CHD9-204	ENST00000561869	ORC1	Q13415	861 aa		4.56	□□□□□ -1.68
CHD9-204	ENST00000561869	VN1R5	Q7Z5H4	357 aa		4.56	□□□□□ -1.68
CHD9-204	ENST00000561869	GALNT12	Q8IXK2	581 aa		4.56	□□□□□ -1.68
CHD9-204	ENST00000561869	MEGF10	Q96KG7	1140 aa		4.56	□□□□□ -1.68
CHD9-204	ENST00000561869	TRAIP	Q9BWF2	469 aa		4.56	□□□□□ -1.68
CHD9-204	ENST00000561869	BHLHE41	Q9C0J9	482 aa	Predicted RBP	4.56	□□□□□ -1.68
CHD9-204	ENST00000561869		A0A1W2PP55	124 aa		4.55	□□□□□ -1.68
CHD9-204	ENST00000561869	ADAM11	O75078	769 aa		4.55	□□□□□ -1.68
CHD9-204	ENST00000561869	ALX3	O95076	343 aa		4.55	□□□□□ -1.68
CHD9-204	ENST00000561869	WISP1	O95388	367 aa		4.55	□□□□□ -1.68
CHD9-204	ENST00000561869	HGSNAT	Q68CP4	663 aa		4.55	□□□□□ -1.68
CHD9-204	ENST00000561869		Q6ZS46	218 aa		4.55	□□□□□ -1.68
CHD9-204	ENST00000561869	KLHDC7B	Q96G42	594 aa		4.55	□□□□□ -1.68
CHD9-204	ENST00000561869	CARD10	Q9BWT7	1032 aa		4.55	□□□□□ -1.68
CHD9-204	ENST00000561869	MRPL18	Q9H0U6	180 aa	Known RBP	4.55	□□□□□ -1.68
CHD9-204	ENST00000561869	METTL12	A8MUP2	240 aa		4.54	□□□□□ -1.68
CHD9-204	ENST00000561869		H3BRJ5	948 aa		4.54	□□□□□ -1.68
CHD9-204	ENST00000561869	SOX1	O00570	391 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD9-204	ENST00000561869	DDX3Y	O15523	660 aa	Known RBP	4.54	□□□□□ -1.68
CHD9-204	ENST00000561869	CD68	P34810	354 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD9-204	ENST00000561869	PDE3B	Q13370	1112 aa		4.54	□□□□□ -1.68
CHD9-204	ENST00000561869	KIAA0319	Q5VV43	1072 aa		4.54	□□□□□ -1.68

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