RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TLL1O43897 1013 aa7.31□□□□□ -1.24
HERC1-213ENST00000561359 NIM1KQ8IY84 436 aa7.31□□□□□ -1.24
HERC1-213ENST00000561359 PSMD1Q99460 953 aa7.31□□□□□ -1.24
HERC1-213ENST00000561359 SLC52A2Q9HAB3 445 aa7.31□□□□□ -1.24
HERC1-213ENST00000561359 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.31□□□□□ -1.24
HERC1-213ENST00000561359 GPRC5DQ9NZD1 345 aa7.31□□□□□ -1.24
HERC1-213ENST00000561359 CEP290O15078 2479 aa7.3□□□□□ -1.24
HERC1-213ENST00000561359 COL6A3P12111 3177 aa7.3□□□□□ -1.24
HERC1-213ENST00000561359 ALDH1B1P30837 517 aa7.3□□□□□ -1.24
HERC1-213ENST00000561359 FBXO46Q6PJ61 603 aaPredicted RBP7.3□□□□□ -1.24
HERC1-213ENST00000561359 USP48Q86UV5 1035 aa7.3□□□□□ -1.24
HERC1-213ENST00000561359 C2orf69Q8N8R5 385 aa7.3□□□□□ -1.24
HERC1-213ENST00000561359 ZC3H15Q8WU90 426 aaKnown RBP7.3□□□□□ -1.24
HERC1-213ENST00000561359 TESK2Q96S53 571 aa7.3□□□□□ -1.24
HERC1-213ENST00000561359 CSRNP1Q96S65 589 aa7.3□□□□□ -1.24
HERC1-213ENST00000561359 SIN3AQ96ST3 1273 aa7.3□□□□□ -1.24
HERC1-213ENST00000561359 POLKQ9UBT6 870 aa7.3□□□□□ -1.24
HERC1-213ENST00000561359 TNNT2P45379 298 aaPredicted RBP7.29□□□□□ -1.24
HERC1-213ENST00000561359 GMPSP49915 693 aaPredicted RBP7.29□□□□□ -1.24
HERC1-213ENST00000561359 FUT2Q10981 343 aa7.29□□□□□ -1.24
HERC1-213ENST00000561359 ZNF296Q8WUU4 475 aaPredicted RBP7.29□□□□□ -1.24
HERC1-213ENST00000561359 GBA2Q9HCG7 927 aaPredicted RBP7.29□□□□□ -1.24
HERC1-213ENST00000561359 PGAP2Q9UHJ9 254 aa7.29□□□□□ -1.24
HERC1-213ENST00000561359 CACNA1SQ13698 1873 aa7.28□□□□□ -1.24
HERC1-213ENST00000561359 KLRG2A4D1S0 409 aaPredicted RBP7.28□□□□□ -1.24
HERC1-213ENST00000561359 FAM177BA6PVY3 158 aa7.28□□□□□ -1.24
HERC1-213ENST00000561359 CAMTA2O94983 1202 aa7.28□□□□□ -1.24
HERC1-213ENST00000561359 CLCN1P35523 988 aa7.28□□□□□ -1.24
HERC1-213ENST00000561359 GCGRP47871 477 aa7.28□□□□□ -1.24
HERC1-213ENST00000561359 GRIPAP1Q4V328 841 aa7.28□□□□□ -1.24
HERC1-213ENST00000561359 CC2D2BQ6DHV5 1058 aa7.28□□□□□ -1.24
HERC1-213ENST00000561359 DLK2Q6UY11 383 aa7.28□□□□□ -1.24
HERC1-213ENST00000561359 AEBP1Q8IUX7 1158 aa7.28□□□□□ -1.24
HERC1-213ENST00000561359 SCUBE3Q8IX30 993 aa7.28□□□□□ -1.24
HERC1-213ENST00000561359 BCL2L13Q9BXK5 485 aa7.28□□□□□ -1.24
HERC1-213ENST00000561359 IRX2Q9BZI1 471 aaPredicted RBP7.28□□□□□ -1.24
HERC1-213ENST00000561359 PRKD2Q9BZL6 878 aa7.28□□□□□ -1.24
HERC1-213ENST00000561359 LGR6Q9HBX8 967 aa7.28□□□□□ -1.24
HERC1-213ENST00000561359 KIAA0100Q14667 2235 aaKnown RBP7.28□□□□□ -1.24
HERC1-213ENST00000561359 RANBP2P49792 3224 aaKnown RBP7.27□□□□□ -1.25
HERC1-213ENST00000561359 PPIP5K2O43314 1243 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 ZMYND10O75800 440 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 TBC1D8O95759 1140 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 ADH1BP00325 375 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 GTF2E1P29083 439 aaPredicted RBP7.27□□□□□ -1.25
HERC1-213ENST00000561359 IL6STP40189 918 aaPredicted RBP7.27□□□□□ -1.25
HERC1-213ENST00000561359 HIRAP54198 1017 aaPredicted RBP7.27□□□□□ -1.25
HERC1-213ENST00000561359 CXCL9Q07325 125 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 TPTE2Q6XPS3 522 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 KRT26Q7Z3Y9 468 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 TTC5Q8N0Z6 440 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 TRPM4Q8TD43 1214 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 TMUB1Q9BVT8 246 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 CARD14Q9BXL6 1004 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 GPCPD1Q9NPB8 672 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 COL4A5P29400 1685 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 CENPFP49454 3210 aa7.27□□□□□ -1.25
HERC1-213ENST00000561359 NPC1L1Q9UHC9 1359 aa7.26□□□□□ -1.25
HERC1-213ENST00000561359 TCERG1O14776 1098 aaKnown RBP7.26□□□□□ -1.25
HERC1-213ENST00000561359 RNMTO43148 476 aaKnown RBP7.26□□□□□ -1.25
HERC1-213ENST00000561359 TTLL12Q14166 644 aaPredicted RBP7.26□□□□□ -1.25
HERC1-213ENST00000561359 INTS3Q68E01 1043 aaKnown RBP7.26□□□□□ -1.25
HERC1-213ENST00000561359 DZIP3Q86Y13 1208 aaKnown RBP7.26□□□□□ -1.25
HERC1-213ENST00000561359 TEX13AQ9BXU3 409 aaPredicted RBP7.26□□□□□ -1.25
HERC1-213ENST00000561359 HTTP42858 3142 aa7.26□□□□□ -1.25
HERC1-213ENST00000561359 ANKRD26Q9UPS8 1709 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 H7C1D1 291 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 GPR25O00155 361 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 S1PR4O95977 384 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 A1BGP04217 495 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 CD46P15529 392 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 AOC3Q16853 763 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 MORN1Q5T089 497 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 SULT6B1Q6IMI4 303 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 CLEC4GQ6UXB4 293 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 SPSB2Q99619 263 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 SLC6A16Q9GZN6 736 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 CNOT7Q9UIV1 285 aaKnown RBP7.25□□□□□ -1.25
HERC1-213ENST00000561359 ZNRF3Q9ULT6 936 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 NIP7Q9Y221 180 aaKnown RBP eCLIP7.25□□□□□ -1.25
HERC1-213ENST00000561359 ZNF652Q9Y2D9 606 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 ARFGEF2Q9Y6D5 1785 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 PITPNM2Q9BZ72 1349 aa7.25□□□□□ -1.25
HERC1-213ENST00000561359 BCORQ6W2J9 1755 aa7.24□□□□□ -1.25
HERC1-213ENST00000561359 SHTN1A0MZ66 631 aa7.24□□□□□ -1.25
HERC1-213ENST00000561359 ADM5C9JUS6 153 aa7.24□□□□□ -1.25
HERC1-213ENST00000561359 H0YGN5 161 aa7.24□□□□□ -1.25
HERC1-213ENST00000561359 FKTNO75072 461 aa7.24□□□□□ -1.25
HERC1-213ENST00000561359 RAD17O75943 681 aa7.24□□□□□ -1.25
HERC1-213ENST00000561359 EN2P19622 333 aaPredicted RBP7.24□□□□□ -1.25
HERC1-213ENST00000561359 TNIP1Q15025 636 aa7.24□□□□□ -1.25
HERC1-213ENST00000561359 RPGRQ92834 1020 aaKnown RBP7.24□□□□□ -1.25
HERC1-213ENST00000561359 DCPSQ96C86 337 aaKnown RBP7.24□□□□□ -1.25
HERC1-213ENST00000561359 ZNF496Q96IT1 587 aaPredicted RBP7.24□□□□□ -1.25
HERC1-213ENST00000561359 TMX4Q9H1E5 349 aaPredicted RBP7.24□□□□□ -1.25
HERC1-213ENST00000561359 SLC27A5Q9Y2P5 690 aa7.24□□□□□ -1.25
HERC1-213ENST00000561359 AKAP11Q9UKA4 1901 aa7.24□□□□□ -1.25
HERC1-213ENST00000561359 KIF20BQ96Q89 1820 aa7.24□□□□□ -1.25
HERC1-213ENST00000561359 BRCA2P51587 3418 aa7.24□□□□□ -1.25
HERC1-213ENST00000561359 CDHR2Q9BYE9 1310 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms