RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 MRS2Q9HD23 443 aa22.25■■□□□ 1.15
CRTC3-208ENST00000560098 PITPNM2Q9BZ72 1349 aa22.25■■□□□ 1.15
CRTC3-208ENST00000560098 FANCIQ9NVI1 1328 aa22.25■■□□□ 1.15
CRTC3-208ENST00000560098 MYH3P11055 1940 aa22.25■■□□□ 1.15
CRTC3-208ENST00000560098 FKBP5Q13451 457 aaPredicted RBP22.24■■□□□ 1.15
CRTC3-208ENST00000560098 MYH16Q9H6N6 1097 aa22.24■■□□□ 1.15
CRTC3-208ENST00000560098 LEMD3Q9Y2U8 911 aa22.24■■□□□ 1.15
CRTC3-208ENST00000560098 ITGA6P23229 1130 aa22.23■■□□□ 1.15
CRTC3-208ENST00000560098 KIF23Q02241 960 aaPredicted RBP22.23■■□□□ 1.15
CRTC3-208ENST00000560098 DACT2Q5SW24 774 aa22.23■■□□□ 1.15
CRTC3-208ENST00000560098 DNAAF4Q8WXU2 420 aa22.23■■□□□ 1.15
CRTC3-208ENST00000560098 COA1Q9GZY4 146 aa22.23■■□□□ 1.15
CRTC3-208ENST00000560098 CCDC85CA6NKD9 419 aa22.23■■□□□ 1.15
CRTC3-208ENST00000560098 CASP7P55210 303 aa22.23■■□□□ 1.15
CRTC3-208ENST00000560098 LINS1Q8NG48 757 aa22.23■■□□□ 1.15
CRTC3-208ENST00000560098 CSF1RP07333 972 aa22.22■■□□□ 1.15
CRTC3-208ENST00000560098 SLC10A3P09131 477 aa22.22■■□□□ 1.15
CRTC3-208ENST00000560098 FAM161AQ3B820 660 aa22.22■■□□□ 1.15
CRTC3-208ENST00000560098 STRIP1Q5VSL9 837 aa22.22■■□□□ 1.15
CRTC3-208ENST00000560098 WDR63Q8IWG1 891 aa22.22■■□□□ 1.15
CRTC3-208ENST00000560098 OGFOD1Q8N543 542 aa22.22■■□□□ 1.15
CRTC3-208ENST00000560098 FBXW7Q969H0 707 aa22.22■■□□□ 1.15
CRTC3-208ENST00000560098 MPHOSPH8Q99549 860 aa22.22■■□□□ 1.15
CRTC3-208ENST00000560098 MXD3Q9BW11 206 aa22.22■■□□□ 1.15
CRTC3-208ENST00000560098 MCOLN1Q9GZU1 580 aa22.22■■□□□ 1.15
CRTC3-208ENST00000560098 ANKRD2Q9GZV1 360 aa22.22■■□□□ 1.15
CRTC3-208ENST00000560098 SAGE1Q9NXZ1 904 aa22.22■■□□□ 1.15
CRTC3-208ENST00000560098 SPEF2Q9C093 1822 aa22.22■■□□□ 1.15
CRTC3-208ENST00000560098 MYO3BQ8WXR4 1341 aa22.21■■□□□ 1.15
CRTC3-208ENST00000560098 VAMP4O75379 141 aa22.21■■□□□ 1.15
CRTC3-208ENST00000560098 FKBP1BP68106 108 aa22.21■■□□□ 1.15
CRTC3-208ENST00000560098 TXNRD3Q86VQ6 643 aa22.21■■□□□ 1.15
CRTC3-208ENST00000560098 SALL2Q9Y467 1007 aaPredicted RBP22.21■■□□□ 1.15
CRTC3-208ENST00000560098 ZNF804BA4D1E1 1349 aa22.2■■□□□ 1.15
CRTC3-208ENST00000560098 NBPF9Q3BBW0 867 aa22.2■■□□□ 1.14
CRTC3-208ENST00000560098 ANP32CO43423 234 aa22.19■■□□□ 1.14
CRTC3-208ENST00000560098 SCAF8Q9UPN6 1271 aaKnown RBP22.19■■□□□ 1.14
CRTC3-208ENST00000560098 EXOSC9Q06265 439 aaKnown RBP22.18■■□□□ 1.14
CRTC3-208ENST00000560098 DGKZQ13574 1117 aa22.18■■□□□ 1.14
CRTC3-208ENST00000560098 RNF186Q9NXI6 227 aa22.18■■□□□ 1.14
CRTC3-208ENST00000560098 CASP8AP2Q9UKL3 1982 aa22.17■■□□□ 1.14
CRTC3-208ENST00000560098 WNT10BO00744 389 aa22.17■■□□□ 1.14
CRTC3-208ENST00000560098 KLRK1P26718 216 aa22.17■■□□□ 1.14
CRTC3-208ENST00000560098 MMP14P50281 582 aa22.17■■□□□ 1.14
CRTC3-208ENST00000560098 CHRNDQ07001 517 aa22.17■■□□□ 1.14
CRTC3-208ENST00000560098 TTLL5Q6EMB2 1281 aa22.17■■□□□ 1.14
CRTC3-208ENST00000560098 RASAL3Q86YV0 1011 aa22.17■■□□□ 1.14
CRTC3-208ENST00000560098 CSRNP1Q96S65 589 aa22.17■■□□□ 1.14
CRTC3-208ENST00000560098 PAPPA2Q9BXP8 1791 aa22.17■■□□□ 1.14
CRTC3-208ENST00000560098 ANKRD18BA2A2Z9 1011 aa22.16■■□□□ 1.14
CRTC3-208ENST00000560098 TRPA1O75762 1119 aa22.16■■□□□ 1.14
CRTC3-208ENST00000560098 KCNJ4P48050 445 aa22.16■■□□□ 1.14
CRTC3-208ENST00000560098 REM2Q8IYK8 340 aaPredicted RBP22.16■■□□□ 1.14
CRTC3-208ENST00000560098 PRAMEF18Q5VWM3 479 aa22.15■■□□□ 1.14
CRTC3-208ENST00000560098 ZNF646O15015 1829 aaPredicted RBP22.15■■□□□ 1.14
CRTC3-208ENST00000560098 F6X3S4 739 aa22.14■■□□□ 1.14
CRTC3-208ENST00000560098 MOB2Q70IA6 237 aa22.14■■□□□ 1.14
CRTC3-208ENST00000560098 RGS19P49795 217 aa22.14■■□□□ 1.13
CRTC3-208ENST00000560098 GTF2IP78347 998 aa22.14■■□□□ 1.13
CRTC3-208ENST00000560098 FOXO4P98177 505 aa22.14■■□□□ 1.13
CRTC3-208ENST00000560098 IFIT5Q13325 482 aaKnown RBP22.14■■□□□ 1.13
CRTC3-208ENST00000560098 BEND3Q5T5X7 828 aa22.14■■□□□ 1.13
CRTC3-208ENST00000560098 KIAA0825Q8IV33 1275 aa22.14■■□□□ 1.13
CRTC3-208ENST00000560098 HDAC9Q9UKV0 1011 aa22.14■■□□□ 1.13
CRTC3-208ENST00000560098 CACNA1FO60840 1977 aa22.13■■□□□ 1.13
CRTC3-208ENST00000560098 UBE2Q2LH0YL09 131 aa22.13■■□□□ 1.13
CRTC3-208ENST00000560098 SASH1O94885 1247 aa22.13■■□□□ 1.13
CRTC3-208ENST00000560098 CD209Q9NNX6 404 aa22.13■■□□□ 1.13
CRTC3-208ENST00000560098 SPINK5Q9NQ38 1064 aaPredicted RBP22.13■■□□□ 1.13
CRTC3-208ENST00000560098 NF2P35240 595 aa22.12■■□□□ 1.13
CRTC3-208ENST00000560098 CHMP3Q9Y3E7 222 aa22.12■■□□□ 1.13
CRTC3-208ENST00000560098 IRS2Q9Y4H2 1338 aa22.11■■□□□ 1.13
CRTC3-208ENST00000560098 SNAP23O00161 211 aa22.11■■□□□ 1.13
CRTC3-208ENST00000560098 TAF5LO75529 589 aa22.11■■□□□ 1.13
CRTC3-208ENST00000560098 ZEB1P37275 1124 aaPredicted RBP22.11■■□□□ 1.13
CRTC3-208ENST00000560098 MLLT1Q03111 559 aaPredicted RBP22.11■■□□□ 1.13
CRTC3-208ENST00000560098 TTLL12Q14166 644 aaPredicted RBP22.11■■□□□ 1.13
CRTC3-208ENST00000560098 C15orf52Q6ZUT6 534 aaKnown RBP22.11■■□□□ 1.13
CRTC3-208ENST00000560098 ZNF316A6NFI3 1004 aaPredicted RBP22.1■■□□□ 1.13
CRTC3-208ENST00000560098 APOBEC3FQ8IUX4 373 aaKnown RBP22.1■■□□□ 1.13
CRTC3-208ENST00000560098 HELBQ8NG08 1087 aaPredicted RBP22.1■■□□□ 1.13
CRTC3-208ENST00000560098 ZBED3Q96IU2 234 aaPredicted RBP22.1■■□□□ 1.13
CRTC3-208ENST00000560098 LMBR1LQ6UX01 489 aa22.09■■□□□ 1.13
CRTC3-208ENST00000560098 AKAP11Q9UKA4 1901 aa22.09■■□□□ 1.13
CRTC3-208ENST00000560098 GRM8O00222 908 aa22.08■■□□□ 1.13
CRTC3-208ENST00000560098 CCDC57Q2TAC2 916 aa22.07■■□□□ 1.12
CRTC3-208ENST00000560098 EPHA10Q5JZY3 1008 aa22.07■■□□□ 1.12
CRTC3-208ENST00000560098 ZNF804AQ7Z570 1209 aa22.07■■□□□ 1.12
CRTC3-208ENST00000560098 CERS5Q8N5B7 392 aa22.06■■□□□ 1.12
CRTC3-208ENST00000560098 C9orf78Q9NZ63 289 aaPredicted RBP22.06■■□□□ 1.12
CRTC3-208ENST00000560098 IL1R1P14778 569 aa22.06■■□□□ 1.12
CRTC3-208ENST00000560098 DLGAP5Q15398 846 aa22.06■■□□□ 1.12
CRTC3-208ENST00000560098 TAF7LQ5H9L4 462 aa22.06■■□□□ 1.12
CRTC3-208ENST00000560098 LDHAL6AQ6ZMR3 332 aa22.06■■□□□ 1.12
CRTC3-208ENST00000560098 ARMC9Q7Z3E5 817 aa22.06■■□□□ 1.12
CRTC3-208ENST00000560098 FAM9BQ8IZU0 186 aa22.06■■□□□ 1.12
CRTC3-208ENST00000560098 MTMR14Q8NCE2 650 aa22.06■■□□□ 1.12
CRTC3-208ENST00000560098 ZNF594Q96JF6 807 aaPredicted RBP22.06■■□□□ 1.12
CRTC3-208ENST00000560098 ALDH1L1O75891 902 aa22.05■■□□□ 1.12
CRTC3-208ENST00000560098 CNNM1Q9NRU3 951 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms