RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 TULP1O00294 542 aaPredicted RBP7.47□□□□□ -1.21
USP3-212ENST00000559276 CA12O43570 354 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 CTSWP56202 376 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 KIF23Q02241 960 aaPredicted RBP7.47□□□□□ -1.21
USP3-212ENST00000559276 SCARF1Q14162 830 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 FAM161AQ3B820 660 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 DACT2Q5SW24 774 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 ANGEL2Q5VTE6 544 aaKnown RBP7.47□□□□□ -1.21
USP3-212ENST00000559276 CCDC30Q5VVM6 783 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 WWC1Q8IX03 1113 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 AGBL3Q8NEM8 1001 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 DCPSQ96C86 337 aaKnown RBP7.47□□□□□ -1.21
USP3-212ENST00000559276 CDCA5Q96FF9 252 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 BEGAINQ9BUH8 593 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 MINPP1Q9UNW1 487 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 XDHP47989 1333 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 IRS2Q9Y4H2 1338 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 MED23Q9ULK4 1368 aa7.46□□□□□ -1.21
USP3-212ENST00000559276 CCDC85CA6NKD9 419 aa7.46□□□□□ -1.22
USP3-212ENST00000559276 SLC10A3P09131 477 aa7.46□□□□□ -1.22
USP3-212ENST00000559276 ATP2B4P23634 1241 aa7.46□□□□□ -1.22
USP3-212ENST00000559276 KLRK1P26718 216 aa7.46□□□□□ -1.22
USP3-212ENST00000559276 CALD1Q05682 793 aaKnown RBP7.46□□□□□ -1.22
USP3-212ENST00000559276 CCDC27Q2M243 656 aa7.46□□□□□ -1.22
USP3-212ENST00000559276 NBPF9Q3BBW0 867 aa7.46□□□□□ -1.22
USP3-212ENST00000559276 MOB2Q70IA6 237 aa7.46□□□□□ -1.22
USP3-212ENST00000559276 PODNQ7Z5L7 613 aa7.46□□□□□ -1.22
USP3-212ENST00000559276 ANKRD18AQ8IVF6 992 aa7.46□□□□□ -1.22
USP3-212ENST00000559276 IPO9Q96P70 1041 aaKnown RBP7.46□□□□□ -1.22
USP3-212ENST00000559276 CSRNP1Q96S65 589 aa7.46□□□□□ -1.22
USP3-212ENST00000559276 MYOZ2Q9NPC6 264 aa7.46□□□□□ -1.22
USP3-212ENST00000559276 BSDC1Q9NW68 430 aaPredicted RBP7.46□□□□□ -1.22
USP3-212ENST00000559276 RNF186Q9NXI6 227 aa7.46□□□□□ -1.22
USP3-212ENST00000559276 AKAP11Q9UKA4 1901 aa7.46□□□□□ -1.22
USP3-212ENST00000559276 USP17L3A6NCW0 530 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 USP17L4A6NCW7 530 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 DDX58O95786 925 aaKnown RBP7.45□□□□□ -1.22
USP3-212ENST00000559276 CSF1RP07333 972 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 USP17L8P0C7I0 530 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 MS4A1P11836 297 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 CCT4P50991 539 aaKnown RBP7.45□□□□□ -1.22
USP3-212ENST00000559276 ZNF157P51786 506 aaPredicted RBP7.45□□□□□ -1.22
USP3-212ENST00000559276 GCKRQ14397 625 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 TWISTNBQ3B726 338 aaPredicted RBP7.45□□□□□ -1.22
USP3-212ENST00000559276 PRAMEF18Q5VWM3 479 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 USP17L1Q7RTZ2 530 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 UBE3BQ7Z3V4 1068 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 RASAL3Q86YV0 1011 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 SULF1Q8IWU6 871 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 C2orf69Q8N8R5 385 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 ZBED3Q96IU2 234 aaPredicted RBP7.45□□□□□ -1.22
USP3-212ENST00000559276 PLA2G12BQ9BX93 195 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 SAGE1Q9NXZ1 904 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 PITPNM2Q9BZ72 1349 aa7.45□□□□□ -1.22
USP3-212ENST00000559276 CACNA1FO60840 1977 aa7.44□□□□□ -1.22
USP3-212ENST00000559276 LAMB1P07942 1786 aa7.44□□□□□ -1.22
USP3-212ENST00000559276 SNAP23O00161 211 aa7.44□□□□□ -1.22
USP3-212ENST00000559276 WNT10BO00744 389 aa7.44□□□□□ -1.22
USP3-212ENST00000559276 VAMP4O75379 141 aa7.44□□□□□ -1.22
USP3-212ENST00000559276 TRPA1O75762 1119 aa7.44□□□□□ -1.22
USP3-212ENST00000559276 SLC4A2P04920 1241 aa7.44□□□□□ -1.22
USP3-212ENST00000559276 HSP90B1P14625 803 aaKnown RBP7.44□□□□□ -1.22
USP3-212ENST00000559276 DEKP35659 375 aaKnown RBP7.44□□□□□ -1.22
USP3-212ENST00000559276 DGKZQ13574 1117 aa7.44□□□□□ -1.22
USP3-212ENST00000559276 PPP4R3CPQ6ZMV5 832 aa7.44□□□□□ -1.22
USP3-212ENST00000559276 FAM9BQ8IZU0 186 aa7.44□□□□□ -1.22
USP3-212ENST00000559276 CCDC102AQ96A19 550 aa7.44□□□□□ -1.22
USP3-212ENST00000559276 CCDC136Q96JN2 1154 aa7.44□□□□□ -1.22
USP3-212ENST00000559276 CDC5LQ99459 802 aaKnown RBP7.44□□□□□ -1.22
USP3-212ENST00000559276 SPINK5Q9NQ38 1064 aaPredicted RBP7.44□□□□□ -1.22
USP3-212ENST00000559276 IL16Q14005 1332 aa7.44□□□□□ -1.22
USP3-212ENST00000559276 UBE2Q2LH0YL09 131 aa7.43□□□□□ -1.22
USP3-212ENST00000559276 ITGA6P23229 1130 aa7.43□□□□□ -1.22
USP3-212ENST00000559276 FOXO4P98177 505 aa7.43□□□□□ -1.22
USP3-212ENST00000559276 MLLT1Q03111 559 aaPredicted RBP7.43□□□□□ -1.22
USP3-212ENST00000559276 FLIIQ13045 1269 aa7.43□□□□□ -1.22
USP3-212ENST00000559276 STRIP1Q5VSL9 837 aa7.43□□□□□ -1.22
USP3-212ENST00000559276 B4GALNT3Q6L9W6 998 aa7.43□□□□□ -1.22
USP3-212ENST00000559276 HOMEZQ8IX15 550 aa7.43□□□□□ -1.22
USP3-212ENST00000559276 CERS5Q8N5B7 392 aa7.43□□□□□ -1.22
USP3-212ENST00000559276 COA1Q9GZY4 146 aa7.43□□□□□ -1.22
USP3-212ENST00000559276 AOX1Q06278 1338 aa7.43□□□□□ -1.22
USP3-212ENST00000559276 ECM29Q5VYK3 1845 aa7.43□□□□□ -1.22
USP3-212ENST00000559276 SSC5DA1L4H1 1573 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 HTTP42858 3142 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 G3V3G9 751 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 SASH1O94885 1247 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 FKBP1BP68106 108 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 IRX6P78412 446 aaPredicted RBP7.42□□□□□ -1.22
USP3-212ENST00000559276 NEXNQ0ZGT2 675 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 EPHA10Q5JZY3 1008 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 DCAF8Q5TAQ9 597 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 LINS1Q8NG48 757 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 DNAAF4Q8WXU2 420 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 STK31Q9BXU1 1019 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 LEMD3Q9Y2U8 911 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 PCDHAC2Q9Y5I4 1007 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 ZNF804BA4D1E1 1349 aa7.42□□□□□ -1.22
USP3-212ENST00000559276 F6X3S4 739 aa7.41□□□□□ -1.22
USP3-212ENST00000559276 TAF5LO75529 589 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms