RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 MCM5P33992 734 aa9.89□□□□□ -0.83
SPG11-209ENST00000558253 CLCN1P35523 988 aa9.89□□□□□ -0.83
SPG11-209ENST00000558253 CCDC57Q2TAC2 916 aa9.89□□□□□ -0.83
SPG11-209ENST00000558253 RGS22Q8NE09 1264 aa9.89□□□□□ -0.83
SPG11-209ENST00000558253 AK7Q96M32 723 aa9.89□□□□□ -0.83
SPG11-209ENST00000558253 FAM227BQ96M60 508 aa9.89□□□□□ -0.83
SPG11-209ENST00000558253 LLPHQ9BRT6 129 aaKnown RBP9.89□□□□□ -0.83
SPG11-209ENST00000558253 CEP126Q9P2H0 1117 aa9.89□□□□□ -0.83
SPG11-209ENST00000558253 CTNNA3Q9UI47 895 aa9.89□□□□□ -0.83
SPG11-209ENST00000558253 GLI3P10071 1580 aa9.88□□□□□ -0.83
SPG11-209ENST00000558253 ERVV-1B6SEH8 477 aa9.88□□□□□ -0.83
SPG11-209ENST00000558253 HSPA2P54652 639 aa9.88□□□□□ -0.83
SPG11-209ENST00000558253 CCDC158Q5M9N0 1113 aa9.88□□□□□ -0.83
SPG11-209ENST00000558253 CCDC183Q5T5S1 534 aa9.88□□□□□ -0.83
SPG11-209ENST00000558253 ATG9AQ7Z3C6 839 aa9.88□□□□□ -0.83
SPG11-209ENST00000558253 FBXL16Q8N461 479 aa9.88□□□□□ -0.83
SPG11-209ENST00000558253 ZBTB38Q8NAP3 1195 aaPredicted RBP9.88□□□□□ -0.83
SPG11-209ENST00000558253 ARFGEF2Q9Y6D5 1785 aa9.88□□□□□ -0.83
SPG11-209ENST00000558253 ELP1O95163 1332 aa9.87□□□□□ -0.83
SPG11-209ENST00000558253 XIRP1Q702N8 1843 aaKnown RBP9.87□□□□□ -0.83
SPG11-209ENST00000558253 SPEF2Q9C093 1822 aa9.87□□□□□ -0.83
SPG11-209ENST00000558253 A0A0D9SFI3 127 aa9.87□□□□□ -0.83
SPG11-209ENST00000558253 A1BGP04217 495 aa9.87□□□□□ -0.83
SPG11-209ENST00000558253 CSF1RP07333 972 aa9.87□□□□□ -0.83
SPG11-209ENST00000558253 GJB2P29033 226 aa9.87□□□□□ -0.83
SPG11-209ENST00000558253 USP48Q86UV5 1035 aa9.87□□□□□ -0.83
SPG11-209ENST00000558253 DDX54Q8TDD1 881 aaKnown RBP9.87□□□□□ -0.83
SPG11-209ENST00000558253 ZNF512BQ96KM6 892 aaPredicted RBP9.87□□□□□ -0.83
SPG11-209ENST00000558253 NEK1Q96PY6 1258 aa9.87□□□□□ -0.83
SPG11-209ENST00000558253 PANK2Q9BZ23 570 aa9.87□□□□□ -0.83
SPG11-209ENST00000558253 SCAND2PQ9GZW5 306 aaPredicted RBP9.87□□□□□ -0.83
SPG11-209ENST00000558253 TSPY26PQ9H489 355 aa9.87□□□□□ -0.83
SPG11-209ENST00000558253 PAG1Q9NWQ8 432 aa9.87□□□□□ -0.83
SPG11-209ENST00000558253 TLR7Q9NYK1 1049 aaKnown RBP9.87□□□□□ -0.83
SPG11-209ENST00000558253 LRP6O75581 1613 aa9.86□□□□□ -0.83
SPG11-209ENST00000558253 ESPNB1AK53 854 aa9.86□□□□□ -0.83
SPG11-209ENST00000558253 RNF113AO15541 343 aaKnown RBP9.86□□□□□ -0.83
SPG11-209ENST00000558253 IFIT5Q13325 482 aaKnown RBP9.86□□□□□ -0.83
SPG11-209ENST00000558253 CAMK2BQ13554 666 aa9.86□□□□□ -0.83
SPG11-209ENST00000558253 ME3Q16798 604 aa9.86□□□□□ -0.83
SPG11-209ENST00000558253 ADCK5Q3MIX3 580 aa9.86□□□□□ -0.83
SPG11-209ENST00000558253 ZMYM1Q5SVZ6 1142 aa9.86□□□□□ -0.83
SPG11-209ENST00000558253 LARP1BQ659C4 914 aaKnown RBP9.86□□□□□ -0.83
SPG11-209ENST00000558253 ATL3Q6DD88 541 aa9.86□□□□□ -0.83
SPG11-209ENST00000558253 ZSCAN25Q6NSZ9 544 aa9.86□□□□□ -0.83
SPG11-209ENST00000558253 GIGYF2Q6Y7W6 1299 aaKnown RBP9.86□□□□□ -0.83
SPG11-209ENST00000558253 TTLL7Q6ZT98 887 aa9.86□□□□□ -0.83
SPG11-209ENST00000558253 NOL8Q76FK4 1167 aaKnown RBP9.86□□□□□ -0.83
SPG11-209ENST00000558253 KLHDC4Q8TBB5 520 aa9.86□□□□□ -0.83
SPG11-209ENST00000558253 DBNDD2Q9BQY9 259 aa9.86□□□□□ -0.83
SPG11-209ENST00000558253 STRN4Q9NRL3 753 aa9.86□□□□□ -0.83
SPG11-209ENST00000558253 MTMR6Q9Y217 621 aa9.86□□□□□ -0.83
SPG11-209ENST00000558253 THRAP3Q9Y2W1 955 aaKnown RBP9.86□□□□□ -0.83
SPG11-209ENST00000558253 NHSL1Q5SYE7 1610 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 MAP3K15Q6ZN16 1313 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 EXOC5O00471 708 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 IFIT1P09914 478 aaKnown RBP9.85□□□□□ -0.83
SPG11-209ENST00000558253 PRIM1P49642 420 aaKnown RBP9.85□□□□□ -0.83
SPG11-209ENST00000558253 KRT85P78386 507 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 HMGN5P82970 282 aaKnown RBP9.85□□□□□ -0.83
SPG11-209ENST00000558253 TTF1Q15361 905 aaPredicted RBP9.85□□□□□ -0.83
SPG11-209ENST00000558253 ARSIQ5FYB1 569 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 DHX32Q7L7V1 743 aaKnown RBP9.85□□□□□ -0.83
SPG11-209ENST00000558253 CCDC83Q8IWF9 413 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 OXER1Q8TDS5 423 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 PDLIM2Q96JY6 352 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 NEUROD6Q96NK8 337 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 KRTAP3-3Q9BYR6 98 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 KRTAP3-2Q9BYR7 98 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 ZSCAN16Q9H4T2 348 aaPredicted RBP9.85□□□□□ -0.83
SPG11-209ENST00000558253 TMEM63CQ9P1W3 806 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 TPCN1Q9ULQ1 816 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 CHMP3Q9Y3E7 222 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 PCDHGA4Q9Y5G9 962 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 STRCQ7RTU9 1775 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 NUP188Q5SRE5 1749 aa9.85□□□□□ -0.83
SPG11-209ENST00000558253 ZNF335Q9H4Z2 1342 aaPredicted RBP9.84□□□□□ -0.83
SPG11-209ENST00000558253 AFDNP55196 1824 aaKnown RBP9.84□□□□□ -0.83
SPG11-209ENST00000558253 ZNF609O15014 1411 aa9.84□□□□□ -0.83
SPG11-209ENST00000558253 TAF7LQ5H9L4 462 aa9.84□□□□□ -0.83
SPG11-209ENST00000558253 GORABQ5T7V8 394 aa9.84□□□□□ -0.83
SPG11-209ENST00000558253 ZSCAN30Q86W11 494 aa9.84□□□□□ -0.83
SPG11-209ENST00000558253 PIGBQ92521 554 aa9.84□□□□□ -0.83
SPG11-209ENST00000558253 PKNOX2Q96KN3 472 aa9.84□□□□□ -0.83
SPG11-209ENST00000558253 DNAJC2Q99543 621 aaKnown RBP9.84□□□□□ -0.83
SPG11-209ENST00000558253 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.84□□□□□ -0.83
SPG11-209ENST00000558253 RBSNQ9H1K0 784 aa9.84□□□□□ -0.83
SPG11-209ENST00000558253 ZBTB3Q9H5J0 574 aa9.84□□□□□ -0.83
SPG11-209ENST00000558253 WDR70Q9NW82 654 aa9.84□□□□□ -0.83
SPG11-209ENST00000558253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.84□□□□□ -0.83
SPG11-209ENST00000558253 WDR19Q8NEZ3 1342 aa9.83□□□□□ -0.84
SPG11-209ENST00000558253 COL14A1Q05707 1796 aaKnown RBP9.83□□□□□ -0.84
SPG11-209ENST00000558253 DISP2A7MBM2 1401 aa9.83□□□□□ -0.84
SPG11-209ENST00000558253 ABCA3Q99758 1704 aa9.83□□□□□ -0.84
SPG11-209ENST00000558253 A0A1B0GUL7 405 aa9.83□□□□□ -0.84
SPG11-209ENST00000558253 SYCE3A1L190 88 aa9.83□□□□□ -0.84
SPG11-209ENST00000558253 ANKRD18BA2A2Z9 1011 aa9.83□□□□□ -0.84
SPG11-209ENST00000558253 DHX16O60231 1041 aaKnown RBP9.83□□□□□ -0.84
SPG11-209ENST00000558253 TBC1D12O60347 775 aa9.83□□□□□ -0.84
SPG11-209ENST00000558253 CAVIN2O95810 425 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms