RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 VGLL2Q8N8G2 317 aa15.16■□□□□ 0.02
TPM1-209ENST00000558072 SUPT20HQ8NEM7 779 aa15.16■□□□□ 0.02
TPM1-209ENST00000558072 C7orf43Q8WVR3 580 aa15.16■□□□□ 0.02
TPM1-209ENST00000558072 EAF2Q96CJ1 260 aaPredicted RBP15.16■□□□□ 0.02
TPM1-209ENST00000558072 ZBTB22O15209 634 aa15.15■□□□□ 0.02
TPM1-209ENST00000558072 PDE1AP54750 535 aa15.15■□□□□ 0.02
TPM1-209ENST00000558072 DALRD3Q5D0E6 543 aaKnown RBP15.15■□□□□ 0.02
TPM1-209ENST00000558072 PLEKHM2Q8IWE5 1019 aa15.15■□□□□ 0.02
TPM1-209ENST00000558072 RTKN2Q8IZC4 609 aa15.15■□□□□ 0.02
TPM1-209ENST00000558072 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.15■□□□□ 0.02
TPM1-209ENST00000558072 ZNF512BQ96KM6 892 aaPredicted RBP15.15■□□□□ 0.02
TPM1-209ENST00000558072 EYA3Q99504 573 aa15.15■□□□□ 0.02
TPM1-209ENST00000558072 GGA1Q9UJY5 639 aa15.15■□□□□ 0.02
TPM1-209ENST00000558072 COL4A5P29400 1685 aa15.15■□□□□ 0.02
TPM1-209ENST00000558072 ARAP2Q8WZ64 1704 aa15.14■□□□□ 0.01
TPM1-209ENST00000558072 FER1L6Q2WGJ9 1857 aa15.14■□□□□ 0.01
TPM1-209ENST00000558072 FGFR2P21802 821 aa15.14■□□□□ 0.01
TPM1-209ENST00000558072 LRRFIP1Q32MZ4 808 aaKnown RBP15.14■□□□□ 0.01
TPM1-209ENST00000558072 C15orf52Q6ZUT6 534 aaKnown RBP15.14■□□□□ 0.01
TPM1-209ENST00000558072 NSFL1CQ9UNZ2 370 aaKnown RBP15.14■□□□□ 0.01
TPM1-209ENST00000558072 ZNF609O15014 1411 aa15.14■□□□□ 0.01
TPM1-209ENST00000558072 ZNF804BA4D1E1 1349 aa15.14■□□□□ 0.01
TPM1-209ENST00000558072 IGSF3O75054 1194 aa15.13■□□□□ 0.01
TPM1-209ENST00000558072 ATP5JP18859 108 aa15.13■□□□□ 0.01
TPM1-209ENST00000558072 TIMM10P62072 90 aa15.13■□□□□ 0.01
TPM1-209ENST00000558072 BMP2KLQ5H9B9 411 aa15.13■□□□□ 0.01
TPM1-209ENST00000558072 TTC39AQ5SRH9 613 aa15.13■□□□□ 0.01
TPM1-209ENST00000558072 DPP8Q6V1X1 898 aaPredicted RBP15.13■□□□□ 0.01
TPM1-209ENST00000558072 VPS37DQ86XT2 251 aa15.13■□□□□ 0.01
TPM1-209ENST00000558072 MPNDQ8N594 471 aa15.13■□□□□ 0.01
TPM1-209ENST00000558072 XAGE2Q96GT9 111 aa15.13■□□□□ 0.01
TPM1-209ENST00000558072 CCDC8Q9H0W5 538 aaPredicted RBP15.13■□□□□ 0.01
TPM1-209ENST00000558072 VPS33BQ9H267 617 aa15.13■□□□□ 0.01
TPM1-209ENST00000558072 TLR7Q9NYK1 1049 aaKnown RBP15.13■□□□□ 0.01
TPM1-209ENST00000558072 SEMA3EO15041 775 aa15.12■□□□□ 0.01
TPM1-209ENST00000558072 PDE4AP27815 886 aa15.12■□□□□ 0.01
TPM1-209ENST00000558072 ADORA1P30542 326 aa15.12■□□□□ 0.01
TPM1-209ENST00000558072 PRELPP51888 382 aa15.12■□□□□ 0.01
TPM1-209ENST00000558072 CCDC93Q567U6 631 aa15.12■□□□□ 0.01
TPM1-209ENST00000558072 C16orf71Q8IYS4 520 aaPredicted RBP15.12■□□□□ 0.01
TPM1-209ENST00000558072 POLLQ9UGP5 575 aa15.12■□□□□ 0.01
TPM1-209ENST00000558072 DBNLQ9UJU6 430 aaKnown RBP15.12■□□□□ 0.01
TPM1-209ENST00000558072 SALL3Q9BXA9 1300 aa15.12■□□□□ 0.01
TPM1-209ENST00000558072 NFKBIEO00221 500 aa15.11■□□□□ 0.01
TPM1-209ENST00000558072 UFL1O94874 794 aa15.11■□□□□ 0.01
TPM1-209ENST00000558072 TTC22Q5TAA0 569 aa15.11■□□□□ 0.01
TPM1-209ENST00000558072 CASC1Q6TDU7 716 aa15.11■□□□□ 0.01
TPM1-209ENST00000558072 ZNF804AQ7Z570 1209 aa15.11■□□□□ 0.01
TPM1-209ENST00000558072 TXNRD3Q86VQ6 643 aa15.11■□□□□ 0.01
TPM1-209ENST00000558072 CNTROBQ8N137 903 aa15.11■□□□□ 0.01
TPM1-209ENST00000558072 OTUD7AQ8TE49 926 aaPredicted RBP15.11■□□□□ 0.01
TPM1-209ENST00000558072 DBNDD2Q9BQY9 259 aa15.11■□□□□ 0.01
TPM1-209ENST00000558072 CCDC88AQ3V6T2 1871 aa15.1■□□□□ 0.01
TPM1-209ENST00000558072 TTF1Q15361 905 aaPredicted RBP15.1■□□□□ 0.01
TPM1-209ENST00000558072 ZC3H12CQ9C0D7 883 aaKnown RBP15.1■□□□□ 0.01
TPM1-209ENST00000558072 C6orf229H3BNL8 230 aa15.09■□□□□ 0.01
TPM1-209ENST00000558072 HIP1O00291 1037 aa15.09■□□□□ 0.01
TPM1-209ENST00000558072 RIMBP2O15034 1052 aa15.09■□□□□ 0.01
TPM1-209ENST00000558072 HIBADHP31937 336 aaKnown RBP15.09■□□□□ 0.01
TPM1-209ENST00000558072 TSHZ3Q63HK5 1081 aa15.09■□□□□ 0.01
TPM1-209ENST00000558072 TMED8Q6PL24 325 aaPredicted RBP15.09■□□□□ 0.01
TPM1-209ENST00000558072 TBC1D16Q8TBP0 767 aa15.09■□□□□ 0.01
TPM1-209ENST00000558072 EVI5LQ96CN4 794 aa15.09■□□□□ 0.01
TPM1-209ENST00000558072 RTFDC1Q9BY42 306 aaPredicted RBP15.09■□□□□ 0.01
TPM1-209ENST00000558072 ZNF277Q9NRM2 450 aaPredicted RBP15.09■□□□□ 0.01
TPM1-209ENST00000558072 MED23Q9ULK4 1368 aa15.09■□□□□ 0.01
TPM1-209ENST00000558072 G3V3G9 751 aa15.08■□□□□ 0
TPM1-209ENST00000558072 ARID4AP29374 1257 aaPredicted RBP15.08■□□□□ 0
TPM1-209ENST00000558072 GPR162Q16538 588 aa15.08■□□□□ 0
TPM1-209ENST00000558072 DCAF8Q5TAQ9 597 aa15.08■□□□□ 0
TPM1-209ENST00000558072 CCDC102BQ68D86 513 aa15.08■□□□□ 0
TPM1-209ENST00000558072 ARHGAP27Q6ZUM4 889 aa15.08■□□□□ 0
TPM1-209ENST00000558072 PSMD1Q99460 953 aa15.08■□□□□ 0
TPM1-209ENST00000558072 HAUS7Q99871 368 aa15.08■□□□□ 0
TPM1-209ENST00000558072 DENND2AQ9ULE3 1009 aa15.08■□□□□ 0
TPM1-209ENST00000558072 PDS5AQ29RF7 1337 aaKnown RBP15.08■□□□□ 0
TPM1-209ENST00000558072 IRS2Q9Y4H2 1338 aa15.08■□□□□ 0
TPM1-209ENST00000558072 TIAM2Q8IVF5 1701 aa15.08■□□□□ 0
TPM1-209ENST00000558072 TRIM6-TRIM34B2RNG4 842 aa15.07■□□□□ 0
TPM1-209ENST00000558072 FRAT2O75474 233 aaPredicted RBP15.07■□□□□ 0
TPM1-209ENST00000558072 GYG1P46976 350 aa15.07■□□□□ 0
TPM1-209ENST00000558072 AOC3Q16853 763 aa15.07■□□□□ 0
TPM1-209ENST00000558072 FBXO33Q7Z6M2 555 aa15.07■□□□□ 0
TPM1-209ENST00000558072 ZGPATQ8N5A5 531 aaKnown RBP15.07■□□□□ 0
TPM1-209ENST00000558072 PI4K2BQ8TCG2 481 aa15.07■□□□□ 0
TPM1-209ENST00000558072 COA1Q9GZY4 146 aa15.07■□□□□ 0
TPM1-209ENST00000558072 IQSEC3Q9UPP2 1182 aaPredicted RBP15.07■□□□□ 0
TPM1-209ENST00000558072 COL1A1P02452 1464 aaPredicted RBP15.07■□□□□ 0
TPM1-209ENST00000558072 ZNF646O15015 1829 aaPredicted RBP15.06■□□□□ 0
TPM1-209ENST00000558072 DOK7Q18PE1 504 aa15.06■□□□□ 0
TPM1-209ENST00000558072 WASHC4Q2M389 1173 aa15.06■□□□□ 0
TPM1-209ENST00000558072 ZSCAN25Q6NSZ9 544 aa15.06■□□□□ 0
TPM1-209ENST00000558072 JAG2Q9Y219 1238 aa15.06■□□□□ 0
TPM1-209ENST00000558072 SRCAPQ6ZRS2 3230 aa15.06■□□□□ 0
TPM1-209ENST00000558072 SBF1O95248 1867 aa15.06■□□□□ 0
TPM1-209ENST00000558072 CHD4Q14839 1912 aa15.05■□□□□ 0
TPM1-209ENST00000558072 FKBP4Q02790 459 aaKnown RBP eCLIP15.05■□□□□ -0
TPM1-209ENST00000558072 FAM84BQ96KN1 310 aaPredicted RBP15.05■□□□□ -0
TPM1-209ENST00000558072 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.05■□□□□ -0
TPM1-209ENST00000558072 BOLA2Q9H3K6 86 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms