RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 UBXN4Q92575 508 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 EDC4Q6P2E9 1401 aaKnown RBP9.53□□□□□ -0.88
CHD8-213ENST00000557364 F6X3S4 739 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 TUBB4BP68371 445 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 GABPB2Q8TAK5 448 aaPredicted RBP9.53□□□□□ -0.88
CHD8-213ENST00000557364 PSMA7O14818 248 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 RHPN1Q8TCX5 695 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 LMBR1Q8WVP7 490 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 BTG4Q9NY30 223 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 GGA1Q9UJY5 639 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 SBNO1A3KN83 1393 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 TRIM27P14373 513 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 PPP2R5BQ15173 497 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 ZNF772Q68DY9 489 aaPredicted RBP9.53□□□□□ -0.88
CHD8-213ENST00000557364 KIF18AQ8NI77 898 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 DNAJC5BQ9UF47 199 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 TRAPPC8Q9Y2L5 1435 aa9.53□□□□□ -0.88
CHD8-213ENST00000557364 LMAN1P49257 510 aa9.52□□□□□ -0.88
CHD8-213ENST00000557364 IFFO1Q0D2I5 559 aa9.52□□□□□ -0.88
CHD8-213ENST00000557364 KIF22Q14807 665 aa9.52□□□□□ -0.88
CHD8-213ENST00000557364 LZTS2Q9BRK4 669 aa9.52□□□□□ -0.88
CHD8-213ENST00000557364 NOP2P46087 812 aaKnown RBP9.52□□□□□ -0.89
CHD8-213ENST00000557364 SKIDA1Q1XH10 827 aa9.52□□□□□ -0.89
CHD8-213ENST00000557364 PUF60Q9UHX1 559 aaKnown RBP9.52□□□□□ -0.89
CHD8-213ENST00000557364 SH3TC1Q8TE82 1336 aa9.52□□□□□ -0.89
CHD8-213ENST00000557364 LIG1P18858 919 aa9.52□□□□□ -0.89
CHD8-213ENST00000557364 MAP2K1Q02750 393 aaPredicted RBP9.52□□□□□ -0.89
CHD8-213ENST00000557364 KRT79Q5XKE5 535 aa9.52□□□□□ -0.89
CHD8-213ENST00000557364 NIM1KQ8IY84 436 aa9.52□□□□□ -0.89
CHD8-213ENST00000557364 RPL13P26373 211 aaKnown RBP9.52□□□□□ -0.89
CHD8-213ENST00000557364 CASQ1P31415 396 aa9.52□□□□□ -0.89
CHD8-213ENST00000557364 FSIP1Q8NA03 581 aa9.52□□□□□ -0.89
CHD8-213ENST00000557364 PAG1Q9NWQ8 432 aa9.52□□□□□ -0.89
CHD8-213ENST00000557364 POLR3AO14802 1390 aaPredicted RBP9.52□□□□□ -0.89
CHD8-213ENST00000557364 ATP2A1O14983 1001 aa9.52□□□□□ -0.89
CHD8-213ENST00000557364 ATL3Q6DD88 541 aa9.52□□□□□ -0.89
CHD8-213ENST00000557364 TCHPQ9BT92 498 aa9.52□□□□□ -0.89
CHD8-213ENST00000557364 SLU7O95391 586 aaKnown RBP9.52□□□□□ -0.89
CHD8-213ENST00000557364 HDAC1Q13547 482 aaPredicted RBP9.52□□□□□ -0.89
CHD8-213ENST00000557364 ZBTB24O43167 697 aaPredicted RBP9.51□□□□□ -0.89
CHD8-213ENST00000557364 SMTNP53814 917 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 SLC9C2Q5TAH2 1124 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 CLIP2Q9UDT6 1046 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 GAS8O95995 478 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 CEP128Q6ZU80 1094 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 HEATR3Q7Z4Q2 680 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 PRAG1Q86YV5 1406 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 MRPS9P82933 396 aaKnown RBP9.51□□□□□ -0.89
CHD8-213ENST00000557364 MCM9Q9NXL9 1143 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 RASAL2Q9UJF2 1139 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 NCKAP5LQ9HCH0 1330 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 H7C1D1 291 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 SELENOOQ9BVL4 669 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 PICALMQ13492 652 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 OTUD7BQ6GQQ9 843 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 SPAG5Q96R06 1193 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 GOPCQ9HD26 462 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 KIF1BO60333 1816 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 MACROD2A1Z1Q3 448 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 FAM13AO94988 1023 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 LMBR1LQ6UX01 489 aa9.51□□□□□ -0.89
CHD8-213ENST00000557364 TUBB4AP04350 444 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 PUM3Q15397 648 aaKnown RBP9.5□□□□□ -0.89
CHD8-213ENST00000557364 TRIM47Q96LD4 638 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 AS3MTQ9HBK9 375 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 DNMT1P26358 1616 aaKnown RBP9.5□□□□□ -0.89
CHD8-213ENST00000557364 PTPN14Q15678 1187 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 TTC22Q5TAA0 569 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 M0QZ92 97 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 PARP1P09874 1014 aaKnown RBP9.5□□□□□ -0.89
CHD8-213ENST00000557364 CYLC1P35663 651 aaPredicted RBP9.5□□□□□ -0.89
CHD8-213ENST00000557364 GRM1Q13255 1194 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 DCAF15Q66K64 600 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 NFATC2IPQ8NCF5 419 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 USP21Q9UK80 565 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 ATP8B2P98198 1209 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 UBE2HP62256 183 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 PLBD2Q8NHP8 589 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 TRIM75PA6NK02 468 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 RNF113AO15541 343 aaKnown RBP9.5□□□□□ -0.89
CHD8-213ENST00000557364 CKAP4Q07065 602 aaKnown RBP9.5□□□□□ -0.89
CHD8-213ENST00000557364 KIAA0753Q2KHM9 967 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 FAM107BQ9H098 131 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 DDX21Q9NR30 783 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHD8-213ENST00000557364 USP25Q9UHP3 1055 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 EXOC7Q9UPT5 735 aa9.5□□□□□ -0.89
CHD8-213ENST00000557364 KLF18A0A0U1RQI7 1052 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 KRT2P35908 639 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 KIF4BQ2VIQ3 1234 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 HAUS3Q68CZ6 603 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 DPP8Q6V1X1 898 aaPredicted RBP9.49□□□□□ -0.89
CHD8-213ENST00000557364 LARGE2Q8N3Y3 721 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 JAKMIP2Q96AA8 810 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 STMN4Q9H169 189 aaPredicted RBP9.49□□□□□ -0.89
CHD8-213ENST00000557364 TCOF1Q13428 1488 aaKnown RBP9.49□□□□□ -0.89
CHD8-213ENST00000557364 PDE8AO60658 829 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 RFX1P22670 979 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 SYKP43405 635 aa9.49□□□□□ -0.89
CHD8-213ENST00000557364 CCT2P78371 535 aaKnown RBP9.49□□□□□ -0.89
CHD8-213ENST00000557364 ALG1Q9BT22 464 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms