RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 NAPAP54920 295 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 EIF4A2Q14240 407 aaKnown RBP13.64□□□□□ -0.23
NEK9-210ENST00000557026 DCAF15Q66K64 600 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 CEP128Q6ZU80 1094 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 PKNOX2Q96KN3 472 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 THUMPD2Q9BTF0 503 aaKnown RBP13.64□□□□□ -0.23
NEK9-210ENST00000557026 BTG4Q9NY30 223 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 FERP16591 822 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 CHPF2Q9P2E5 772 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 TRPC5Q9UL62 973 aaPredicted RBP13.64□□□□□ -0.23
NEK9-210ENST00000557026 TRIM27P14373 513 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 TDRD12Q587J7 1177 aaKnown RBP13.63□□□□□ -0.23
NEK9-210ENST00000557026 USP48Q86UV5 1035 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 CALRP27797 417 aaKnown RBP13.63□□□□□ -0.23
NEK9-210ENST00000557026 HOXC9P31274 260 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 SLC26A6Q9BXS9 759 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 AOX1Q06278 1338 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 H7C1D1 291 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 TAF12Q16514 161 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 CNKSR1Q969H4 720 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 ACSBG1Q96GR2 724 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 EXOC7Q9UPT5 735 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 F6X3S4 739 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 PAG1Q9NWQ8 432 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 CLIP2Q9UDT6 1046 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 USP25Q9UHP3 1055 aa13.63□□□□□ -0.23
NEK9-210ENST00000557026 TCERG1LQ5VWI1 586 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 FSIP1Q8NA03 581 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 COMMD10Q9Y6G5 202 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 HMGB1P1B2RPK0 211 aaPredicted RBP13.62□□□□□ -0.23
NEK9-210ENST00000557026 ZBED4O75132 1171 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 PUM3Q15397 648 aaKnown RBP13.62□□□□□ -0.23
NEK9-210ENST00000557026 SLC9C2Q5TAH2 1124 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 UBXN4Q92575 508 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 SYNCQ9H7C4 482 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 USP21Q9UK80 565 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 ATP7AQ04656 1500 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 CYLC1P35663 651 aaPredicted RBP13.62□□□□□ -0.23
NEK9-210ENST00000557026 BRAPQ7Z569 592 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 SLAIN2Q9P270 581 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 FSD2A1L4K1 749 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 TRIM75PA6NK02 468 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 BIN2Q9UBW5 565 aaPredicted RBP13.62□□□□□ -0.23
NEK9-210ENST00000557026 MROH5Q6ZUA9 1318 aa13.62□□□□□ -0.23
NEK9-210ENST00000557026 HIBADHP31937 336 aaKnown RBP13.61□□□□□ -0.23
NEK9-210ENST00000557026 NUP88Q99567 741 aaPredicted RBP13.61□□□□□ -0.23
NEK9-210ENST00000557026 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
NEK9-210ENST00000557026 NDC80O14777 642 aa13.61□□□□□ -0.23
NEK9-210ENST00000557026 TMEM87BQ96K49 555 aa13.61□□□□□ -0.23
NEK9-210ENST00000557026 ATP2A1O14983 1001 aa13.61□□□□□ -0.23
NEK9-210ENST00000557026 ZBTB24O43167 697 aaPredicted RBP13.61□□□□□ -0.23
NEK9-210ENST00000557026 CC2D2BQ6DHV5 1058 aa13.61□□□□□ -0.23
NEK9-210ENST00000557026 NOD1Q9Y239 953 aa13.61□□□□□ -0.23
NEK9-210ENST00000557026 MAPKBP1O60336 1514 aa13.61□□□□□ -0.23
NEK9-210ENST00000557026 KLF18A0A0U1RQI7 1052 aa13.61□□□□□ -0.23
NEK9-210ENST00000557026 STAT6P42226 847 aa13.61□□□□□ -0.23
NEK9-210ENST00000557026 CKAP4Q07065 602 aaKnown RBP13.61□□□□□ -0.23
NEK9-210ENST00000557026 CCDC14Q49A88 953 aa13.61□□□□□ -0.23
NEK9-210ENST00000557026 MCM4P33991 863 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 HAUS3Q68CZ6 603 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 DPP8Q6V1X1 898 aaPredicted RBP13.6□□□□□ -0.23
NEK9-210ENST00000557026 MICU3Q86XE3 530 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 NLGN1Q8N2Q7 840 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 CCDC94Q9BW85 323 aaPredicted RBP13.6□□□□□ -0.23
NEK9-210ENST00000557026 VAT1LQ9HCJ6 419 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 FAM13AO94988 1023 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 PARP1P09874 1014 aaKnown RBP13.6□□□□□ -0.23
NEK9-210ENST00000557026 TAX1BP1Q86VP1 789 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 SPAG5Q96R06 1193 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.6□□□□□ -0.232e-7■■■□□ 17.6
NEK9-210ENST00000557026 RASAL2Q9UJF2 1139 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 TMEM2Q9UHN6 1383 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 KIF4BQ2VIQ3 1234 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 LARGE2Q8N3Y3 721 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 CCDC77Q9BR77 488 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 FAM107BQ9H098 131 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 RTEL1Q9NZ71 1219 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 PLEKHG3A1L390 1219 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 POLR3GO15318 223 aaPredicted RBP13.6□□□□□ -0.23
NEK9-210ENST00000557026 SMTNP53814 917 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 KIF18AQ8NI77 898 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 SELENOOQ9BVL4 669 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 MCM9Q9NXL9 1143 aa13.6□□□□□ -0.23
NEK9-210ENST00000557026 TEX11Q8IYF3 940 aa13.59□□□□□ -0.23
NEK9-210ENST00000557026 ALG1Q9BT22 464 aa13.59□□□□□ -0.23
NEK9-210ENST00000557026 IKBKGQ9Y6K9 419 aa13.59□□□□□ -0.23
NEK9-210ENST00000557026 MAST1Q9Y2H9 1570 aa13.59□□□□□ -0.23
NEK9-210ENST00000557026 M0QZ92 97 aa13.59□□□□□ -0.23
NEK9-210ENST00000557026 TMED8Q6PL24 325 aaPredicted RBP13.59□□□□□ -0.23
NEK9-210ENST00000557026 TRIM47Q96LD4 638 aa13.59□□□□□ -0.23
NEK9-210ENST00000557026 TCHPQ9BT92 498 aa13.59□□□□□ -0.23
NEK9-210ENST00000557026 STMN4Q9H169 189 aaPredicted RBP13.59□□□□□ -0.23
NEK9-210ENST00000557026 POLKQ9UBT6 870 aa13.59□□□□□ -0.23
NEK9-210ENST00000557026 IBSPP21815 317 aaPredicted RBP13.59□□□□□ -0.23
NEK9-210ENST00000557026 KRT2P35908 639 aa13.59□□□□□ -0.23
NEK9-210ENST00000557026 UBE2HP62256 183 aa13.59□□□□□ -0.23
NEK9-210ENST00000557026 PLCD1P51178 756 aa13.59□□□□□ -0.23
NEK9-210ENST00000557026 GOPCQ9HD26 462 aa13.59□□□□□ -0.23
NEK9-210ENST00000557026 UFL1O94874 794 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms