RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 FGFR2P21802 821 aa11.75□□□□□ -0.53
HNRNPC-220ENST00000555585 KCNJ4P48050 445 aa11.75□□□□□ -0.53
HNRNPC-220ENST00000555585 CRAMP1Q96RY5 1269 aa11.75□□□□□ -0.53
HNRNPC-220ENST00000555585 DNAJC2Q99543 621 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-220ENST00000555585 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
HNRNPC-220ENST00000555585 SNAP23O00161 211 aa11.74□□□□□ -0.53
HNRNPC-220ENST00000555585 SEC24BO95487 1268 aa11.74□□□□□ -0.53
HNRNPC-220ENST00000555585 NPR1P16066 1061 aa11.74□□□□□ -0.53
HNRNPC-220ENST00000555585 HOXA10P31260 410 aaPredicted RBP11.74□□□□□ -0.53
HNRNPC-220ENST00000555585 MFAP1P55081 439 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-220ENST00000555585 R3HDM1Q15032 1099 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-220ENST00000555585 C2CD5Q86YS7 1000 aa11.74□□□□□ -0.53
HNRNPC-220ENST00000555585 EVI5LQ96CN4 794 aa11.74□□□□□ -0.53
HNRNPC-220ENST00000555585 UPF2Q9HAU5 1272 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-220ENST00000555585 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-220ENST00000555585 COL11A2P13942 1736 aaPredicted RBP11.74□□□□□ -0.53
HNRNPC-220ENST00000555585 H0YIN7 160 aa11.73□□□□□ -0.53
HNRNPC-220ENST00000555585 EIF5BO60841 1220 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-220ENST00000555585 BBOX1O75936 387 aa11.73□□□□□ -0.53
HNRNPC-220ENST00000555585 ZBTB7AO95365 584 aa11.73□□□□□ -0.53
HNRNPC-220ENST00000555585 SRGNP10124 158 aa11.73□□□□□ -0.53
HNRNPC-220ENST00000555585 ALDH1B1P30837 517 aa11.73□□□□□ -0.53
HNRNPC-220ENST00000555585 CACNA1SQ13698 1873 aa11.73□□□□□ -0.53
HNRNPC-220ENST00000555585 UBE4AQ14139 1066 aa11.73□□□□□ -0.53
HNRNPC-220ENST00000555585 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.73□□□□□ -0.53
HNRNPC-220ENST00000555585 ZNF622Q969S3 477 aaKnown RBP eCLIP11.73□□□□□ -0.531e-21■□□□□ 9
HNRNPC-220ENST00000555585 MASTLQ96GX5 879 aa11.73□□□□□ -0.53
HNRNPC-220ENST00000555585 HAUS7Q99871 368 aa11.73□□□□□ -0.53
HNRNPC-220ENST00000555585 PPEF1O14829 653 aaPredicted RBP11.72□□□□□ -0.53
HNRNPC-220ENST00000555585 UQCRFS1P1P0C7P4 283 aa11.72□□□□□ -0.53
HNRNPC-220ENST00000555585 CHMLP26374 656 aa11.72□□□□□ -0.53
HNRNPC-220ENST00000555585 CCDC102BQ68D86 513 aa11.72□□□□□ -0.53
HNRNPC-220ENST00000555585 FSD1Q9BTV5 496 aa11.72□□□□□ -0.53
HNRNPC-220ENST00000555585 ANKIB1Q9P2G1 1089 aa11.72□□□□□ -0.53
HNRNPC-220ENST00000555585 NDUFB9Q9Y6M9 179 aa11.72□□□□□ -0.53
HNRNPC-220ENST00000555585 PSDA5PKW4 1024 aaPredicted RBP11.71□□□□□ -0.53
HNRNPC-220ENST00000555585 GOLIM4O00461 696 aa11.71□□□□□ -0.53
HNRNPC-220ENST00000555585 POLD1P28340 1107 aa11.71□□□□□ -0.53
HNRNPC-220ENST00000555585 PHKA1P46020 1223 aa11.71□□□□□ -0.53
HNRNPC-220ENST00000555585 FKBP4Q02790 459 aaKnown RBP eCLIP11.71□□□□□ -0.53
HNRNPC-220ENST00000555585 CAVIN4Q5BKX8 364 aa11.71□□□□□ -0.53
HNRNPC-220ENST00000555585 TMC4Q7Z404 712 aa11.71□□□□□ -0.53
HNRNPC-220ENST00000555585 EDC3Q96F86 508 aaKnown RBP11.71□□□□□ -0.53
HNRNPC-220ENST00000555585 MTFR1LQ9H019 292 aa11.71□□□□□ -0.53
HNRNPC-220ENST00000555585 TMX4Q9H1E5 349 aaPredicted RBP11.71□□□□□ -0.53
HNRNPC-220ENST00000555585 SNRKQ9NRH2 765 aa11.71□□□□□ -0.53
HNRNPC-220ENST00000555585 DIAPH3Q9NSV4 1193 aa11.71□□□□□ -0.53
HNRNPC-220ENST00000555585 PAG1Q9NWQ8 432 aa11.71□□□□□ -0.53
HNRNPC-220ENST00000555585 ZNF804BA4D1E1 1349 aa11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 XDHP47989 1333 aa11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 WTIPA6NIX2 430 aaPredicted RBP11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 HIP1O00291 1037 aa11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 ARID4AP29374 1257 aaPredicted RBP11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 CHRNA5P30532 468 aa11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 ZAP70P43403 619 aa11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 BCAMP50895 628 aa11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 GPSM2P81274 684 aa11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 STYK1Q6J9G0 422 aa11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 VPS37DQ86XT2 251 aa11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 SP8Q8IXZ3 490 aa11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 ZNF512BQ96KM6 892 aaPredicted RBP11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 ESYT1Q9BSJ8 1104 aa11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 GNL3LQ9NVN8 582 aaKnown RBP11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 LEMD3Q9Y2U8 911 aa11.7□□□□□ -0.54
HNRNPC-220ENST00000555585 C10orf71Q711Q0 1435 aa11.69□□□□□ -0.54
HNRNPC-220ENST00000555585 LRRC37AA6NMS7 1700 aa11.69□□□□□ -0.54
HNRNPC-220ENST00000555585 CD44P16070 742 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-220ENST00000555585 ATP2B4P23634 1241 aa11.69□□□□□ -0.54
HNRNPC-220ENST00000555585 MCAMP43121 646 aa11.69□□□□□ -0.54
HNRNPC-220ENST00000555585 GYG1P46976 350 aa11.69□□□□□ -0.54
HNRNPC-220ENST00000555585 SCARF1Q14162 830 aa11.69□□□□□ -0.54
HNRNPC-220ENST00000555585 SLC51AQ86UW1 340 aa11.69□□□□□ -0.54
HNRNPC-220ENST00000555585 KBTBD3Q8NAB2 608 aa11.69□□□□□ -0.54
HNRNPC-220ENST00000555585 RUFY2Q8WXA3 655 aa11.69□□□□□ -0.54
HNRNPC-220ENST00000555585 GGA1Q9UJY5 639 aa11.69□□□□□ -0.54
HNRNPC-220ENST00000555585 NSFL1CQ9UNZ2 370 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-220ENST00000555585 ATP6V0A2Q9Y487 856 aa11.69□□□□□ -0.54
HNRNPC-220ENST00000555585 AKAP11Q9UKA4 1901 aa11.68□□□□□ -0.54
HNRNPC-220ENST00000555585 UFL1O94874 794 aa11.68□□□□□ -0.54
HNRNPC-220ENST00000555585 REC8O95072 547 aa11.68□□□□□ -0.54
HNRNPC-220ENST00000555585 CWC27Q6UX04 472 aaKnown RBP11.68□□□□□ -0.54
HNRNPC-220ENST00000555585 PI16Q6UXB8 463 aa11.68□□□□□ -0.54
HNRNPC-220ENST00000555585 CNKSR1Q969H4 720 aa11.68□□□□□ -0.54
HNRNPC-220ENST00000555585 ANTXR1Q9H6X2 564 aa11.68□□□□□ -0.54
HNRNPC-220ENST00000555585 MYH13Q9UKX3 1938 aa11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 C6orf229H3BNL8 230 aa11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 FRAT2O75474 233 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 KLRK1P26718 216 aa11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 HIBADHP31937 336 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 NMIQ13287 307 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 TTF1Q15361 905 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 LRRFIP1Q32MZ4 808 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 ILDR2Q71H61 639 aa11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 SPATA5Q8NB90 893 aa11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 FAM84BQ96KN1 310 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 C22orf23Q9BZE7 217 aa11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 HMG20BQ9P0W2 317 aa11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 IQSEC3Q9UPP2 1182 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 DLEC1Q9Y238 1755 aa11.67□□□□□ -0.54
HNRNPC-220ENST00000555585 RFX7Q2KHR2 1363 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms