RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PHLPP2Q6ZVD8 1323 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 KIF1CO43896 1103 aaKnown RBP18.18■□□□□ 0.5
SYNE3-203ENST00000554873 KCNJ6P48051 423 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 AACSQ86V21 672 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 ZKSCAN1P17029 563 aaPredicted RBP18.18■□□□□ 0.5
SYNE3-203ENST00000554873 TEFQ10587 303 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 GPATCH3Q96I76 525 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 FAM227BQ96M60 508 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 SCAND2PQ9GZW5 306 aaPredicted RBP18.18■□□□□ 0.5
SYNE3-203ENST00000554873 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.18■□□□□ 0.5
SYNE3-203ENST00000554873 CORO7P57737 925 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 PROSER3Q2NL68 480 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 LARP1BQ659C4 914 aaKnown RBP18.17■□□□□ 0.5
SYNE3-203ENST00000554873 MPRIPQ6WCQ1 1025 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 MAP4K1Q92918 833 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 OSBPL5Q9H0X9 879 aaPredicted RBP18.17■□□□□ 0.5
SYNE3-203ENST00000554873 DBF4Q9UBU7 674 aaPredicted RBP18.17■□□□□ 0.5
SYNE3-203ENST00000554873 ALDH1L1O75891 902 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 CWF19L2Q2TBE0 894 aaKnown RBP18.17■□□□□ 0.5
SYNE3-203ENST00000554873 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 ERC1Q8IUD2 1116 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 ARFGAP3Q9NP61 516 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 ANKARQ7Z5J8 1434 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 CPP00450 1065 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 KCNA6P17658 529 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 ETF1P62495 437 aaKnown RBP18.16■□□□□ 0.5
SYNE3-203ENST00000554873 MMS22LQ6ZRQ5 1243 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 CNPY4Q8N129 248 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 CEP89Q96ST8 783 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 IMPACTQ9P2X3 320 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 MED1Q15648 1581 aaPredicted RBP18.16■□□□□ 0.5
SYNE3-203ENST00000554873 NMIQ13287 307 aaPredicted RBP18.16■□□□□ 0.5
SYNE3-203ENST00000554873 E2F4Q16254 413 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 FAM173BQ6P4H8 233 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 KSR2Q6VAB6 950 aa18.15■□□□□ 0.5
SYNE3-203ENST00000554873 FERMT3Q86UX7 667 aa18.15■□□□□ 0.5
SYNE3-203ENST00000554873 SASH1O94885 1247 aa18.15■□□□□ 0.5
SYNE3-203ENST00000554873 LRRFIP1Q32MZ4 808 aaKnown RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 ZNF530Q6P9A1 599 aaPredicted RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 CDC37L1Q7L3B6 337 aa18.15■□□□□ 0.5
SYNE3-203ENST00000554873 GPR161Q8N6U8 529 aaKnown RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 SYTL4Q96C24 671 aaPredicted RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 EAF2Q96CJ1 260 aaPredicted RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 FUT8Q9BYC5 575 aa18.15■□□□□ 0.5
SYNE3-203ENST00000554873 ZSCAN16Q9H4T2 348 aaPredicted RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 MKRN1Q9UHC7 482 aaKnown RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 BECN2A8MW95 431 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 SLC27A2O14975 620 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 NR1I2O75469 434 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 EVCP57679 992 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 AKAP4Q5JQC9 854 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 HOMER1Q86YM7 354 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 CCDC150Q8NCX0 1101 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 SPATA32Q96LK8 384 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 CCDC8Q9H0W5 538 aaPredicted RBP18.14■□□□□ 0.5
SYNE3-203ENST00000554873 MED4Q9NPJ6 270 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.49
SYNE3-203ENST00000554873 DNAI1Q9UI46 699 aa18.14■□□□□ 0.49
SYNE3-203ENST00000554873 KDM3BQ7LBC6 1761 aa18.14■□□□□ 0.49
SYNE3-203ENST00000554873 SLIT1O75093 1534 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 C11orf57Q6ZUT1 292 aaPredicted RBP18.13■□□□□ 0.49
SYNE3-203ENST00000554873 LRRC59Q96AG4 307 aaKnown RBP18.13■□□□□ 0.49
SYNE3-203ENST00000554873 KAZALD1Q96I82 304 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 TCEANC2Q96MN5 208 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 CARD6Q9BX69 1037 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 H3BQF6 201 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 CCP110O43303 1012 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 NRDCO43847 1150 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 GIGYF1O75420 1035 aaPredicted RBP18.13■□□□□ 0.49
SYNE3-203ENST00000554873 SATB1Q01826 763 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 STX1AQ16623 288 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 PRAMEF22A3QJZ6 481 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 PSMA5P28066 241 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 SUCLG2Q96I99 432 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 TAF6LQ9Y6J9 622 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 ATP6V1AP38606 617 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 DHX8Q14562 1220 aaKnown RBP18.12■□□□□ 0.49
SYNE3-203ENST00000554873 BICD2Q8TD16 824 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 SUFUQ9UMX1 484 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 A0A0D9SFI3 127 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 HIP1O00291 1037 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 SMC2O95347 1197 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 EFCAB13Q8IY85 973 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 CEP120Q8N960 986 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 LEO1Q8WVC0 666 aaPredicted RBP18.12■□□□□ 0.49
SYNE3-203ENST00000554873 SNRKQ9NRH2 765 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 TLR7Q9NYK1 1049 aaKnown RBP18.12■□□□□ 0.49
SYNE3-203ENST00000554873 USP54Q70EL1 1684 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 RNMTO43148 476 aaKnown RBP18.11■□□□□ 0.49
SYNE3-203ENST00000554873 URI1O94763 535 aaPredicted RBP18.11■□□□□ 0.49
SYNE3-203ENST00000554873 MAP2K2P36507 400 aa18.11■□□□□ 0.49
SYNE3-203ENST00000554873 G3BP1Q13283 466 aaKnown RBP eCLIP18.11■□□□□ 0.49
SYNE3-203ENST00000554873 PLEKHO1Q53GL0 409 aaPredicted RBP18.11■□□□□ 0.49
SYNE3-203ENST00000554873 ANKRD20A12PQ8NF67 263 aa18.11■□□□□ 0.49
SYNE3-203ENST00000554873 BOLA2Q9H3K6 86 aa18.11■□□□□ 0.49
SYNE3-203ENST00000554873 FOXR1Q6PIV2 292 aa18.11■□□□□ 0.49
SYNE3-203ENST00000554873 BICC1Q9H694 974 aaKnown RBP18.11■□□□□ 0.49
SYNE3-203ENST00000554873 PHF8Q9UPP1 1060 aa18.11■□□□□ 0.49
SYNE3-203ENST00000554873 LTN1O94822 1766 aa18.11■□□□□ 0.49
SYNE3-203ENST00000554873 GRM8O00222 908 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms