RNA–Protein interactions for RNA: ENST00000553660.5

CNIH1-203, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2 BASIC

Gene CNIH1, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-203ENST00000553660 CRY2Q49AN0 593 aa13.73□□□□□ -0.21
CNIH1-203ENST00000553660 FAM9BQ8IZU0 186 aa13.73□□□□□ -0.21
CNIH1-203ENST00000553660 C8orf58Q8NAV2 365 aa13.73□□□□□ -0.21
CNIH1-203ENST00000553660 ANKRD31Q8N7Z5 1873 aa13.72□□□□□ -0.21
CNIH1-203ENST00000553660 NTSR2O95665 410 aa13.72□□□□□ -0.21
CNIH1-203ENST00000553660 ANXA1P04083 346 aa13.72□□□□□ -0.21
CNIH1-203ENST00000553660 NPR1P16066 1061 aa13.72□□□□□ -0.21
CNIH1-203ENST00000553660 SLC10A5Q5PT55 438 aa13.72□□□□□ -0.21
CNIH1-203ENST00000553660 SOGA3Q5TF21 947 aa13.72□□□□□ -0.21
CNIH1-203ENST00000553660 SUSD4Q5VX71 490 aa13.72□□□□□ -0.21
CNIH1-203ENST00000553660 NUP98P52948 1817 aa13.71□□□□□ -0.21
CNIH1-203ENST00000553660 ZNF521Q96K83 1311 aa13.71□□□□□ -0.21
CNIH1-203ENST00000553660 ZC3H4Q9UPT8 1303 aaKnown RBP13.71□□□□□ -0.21
CNIH1-203ENST00000553660 GTF2E1P29083 439 aaPredicted RBP13.71□□□□□ -0.21
CNIH1-203ENST00000553660 ARHGAP27Q6ZUM4 889 aa13.71□□□□□ -0.21
CNIH1-203ENST00000553660 GPTP24298 496 aa13.7□□□□□ -0.22
CNIH1-203ENST00000553660 ALDH1B1P30837 517 aa13.7□□□□□ -0.22
CNIH1-203ENST00000553660 HOXA10P31260 410 aaPredicted RBP13.7□□□□□ -0.22
CNIH1-203ENST00000553660 GCGRP47871 477 aa13.7□□□□□ -0.22
CNIH1-203ENST00000553660 AIMP1Q12904 312 aaKnown RBP13.7□□□□□ -0.22
CNIH1-203ENST00000553660 NLRP10Q86W26 655 aa13.7□□□□□ -0.22
CNIH1-203ENST00000553660 ZNF622Q969S3 477 aaKnown RBP eCLIP13.7□□□□□ -0.22
CNIH1-203ENST00000553660 ISCA1Q9BUE6 129 aa13.7□□□□□ -0.22
CNIH1-203ENST00000553660 UTP14AQ9BVJ6 771 aaKnown RBP13.7□□□□□ -0.22
CNIH1-203ENST00000553660 MYH16Q9H6N6 1097 aa13.7□□□□□ -0.22
CNIH1-203ENST00000553660 WWC3Q9ULE0 1092 aa13.7□□□□□ -0.22
CNIH1-203ENST00000553660 LTBP3Q9NS15 1303 aa13.69□□□□□ -0.22
CNIH1-203ENST00000553660 FANCIQ9NVI1 1328 aa13.69□□□□□ -0.22
CNIH1-203ENST00000553660 ELL2O00472 640 aaPredicted RBP13.69□□□□□ -0.22
CNIH1-203ENST00000553660 TWISTNBQ3B726 338 aaPredicted RBP13.69□□□□□ -0.22
CNIH1-203ENST00000553660 CCDC24Q8N4L8 307 aa13.69□□□□□ -0.22
CNIH1-203ENST00000553660 TSPYL6Q8N831 410 aa13.69□□□□□ -0.22
CNIH1-203ENST00000553660 C7orf43Q8WVR3 580 aa13.69□□□□□ -0.22
CNIH1-203ENST00000553660 TSR2Q969E8 191 aaKnown RBP13.69□□□□□ -0.22
CNIH1-203ENST00000553660 ACTN4O43707 911 aaKnown RBP13.68□□□□□ -0.22
CNIH1-203ENST00000553660 DDX58O95786 925 aaKnown RBP13.68□□□□□ -0.22
CNIH1-203ENST00000553660 ERFEQ4G0M1 354 aa13.68□□□□□ -0.22
CNIH1-203ENST00000553660 GRIPAP1Q4V328 841 aa13.68□□□□□ -0.22
CNIH1-203ENST00000553660 PRPF40BQ6NWY9 871 aaKnown RBP13.68□□□□□ -0.22
CNIH1-203ENST00000553660 ABCC12Q96J65 1359 aa13.68□□□□□ -0.22
CNIH1-203ENST00000553660 COL11A2P13942 1736 aaPredicted RBP13.67□□□□□ -0.22
CNIH1-203ENST00000553660 LMNB1P20700 586 aa13.67□□□□□ -0.22
CNIH1-203ENST00000553660 CC2D2BQ6DHV5 1058 aa13.67□□□□□ -0.22
CNIH1-203ENST00000553660 NUTM1Q86Y26 1132 aa13.67□□□□□ -0.22
CNIH1-203ENST00000553660 NLRP3Q96P20 1036 aa13.67□□□□□ -0.22
CNIH1-203ENST00000553660 CRAMP1Q96RY5 1269 aa13.67□□□□□ -0.22
CNIH1-203ENST00000553660 STK31Q9BXU1 1019 aa13.67□□□□□ -0.22
CNIH1-203ENST00000553660 SH3TC1Q8TE82 1336 aa13.66□□□□□ -0.22
CNIH1-203ENST00000553660 FAM177BA6PVY3 158 aa13.66□□□□□ -0.22
CNIH1-203ENST00000553660 VAMP4O75379 141 aa13.66□□□□□ -0.22
CNIH1-203ENST00000553660 MS4A1P11836 297 aa13.66□□□□□ -0.22
CNIH1-203ENST00000553660 HSP90B1P14625 803 aaKnown RBP13.66□□□□□ -0.22
CNIH1-203ENST00000553660 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
CNIH1-203ENST00000553660 ARFGEF2Q9Y6D5 1785 aa13.66□□□□□ -0.22
CNIH1-203ENST00000553660 NFKBIEO00221 500 aa13.65□□□□□ -0.22
CNIH1-203ENST00000553660 C21orf2O43822 256 aa13.65□□□□□ -0.22
CNIH1-203ENST00000553660 C9orf131Q5VYM1 1079 aa13.65□□□□□ -0.22
CNIH1-203ENST00000553660 RIC3Q7Z5B4 369 aa13.65□□□□□ -0.22
CNIH1-203ENST00000553660 CCDC191Q8NCU4 936 aa13.65□□□□□ -0.22
CNIH1-203ENST00000553660 PHAXQ9H814 394 aaKnown RBP13.65□□□□□ -0.22
CNIH1-203ENST00000553660 GPBP1L1Q9HC44 474 aaPredicted RBP13.65□□□□□ -0.22
CNIH1-203ENST00000553660 TRMT112Q9UI30 125 aaKnown RBP13.65□□□□□ -0.22
CNIH1-203ENST00000553660 E9PSI1 815 aa13.64□□□□□ -0.23
CNIH1-203ENST00000553660 CCDC93Q567U6 631 aa13.64□□□□□ -0.23
CNIH1-203ENST00000553660 KSR2Q6VAB6 950 aa13.64□□□□□ -0.23
CNIH1-203ENST00000553660 RTKN2Q8IZC4 609 aa13.64□□□□□ -0.23
CNIH1-203ENST00000553660 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
CNIH1-203ENST00000553660 RBM17Q96I25 401 aaKnown RBP13.64□□□□□ -0.23
CNIH1-203ENST00000553660 METTL22Q9BUU2 404 aaPredicted RBP13.64□□□□□ -0.23
CNIH1-203ENST00000553660 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
CNIH1-203ENST00000553660 PCDHB3Q9Y5E6 796 aa13.64□□□□□ -0.23
CNIH1-203ENST00000553660 EXOSC9Q06265 439 aaKnown RBP13.63□□□□□ -0.23
CNIH1-203ENST00000553660 DIEXFQ68CQ4 756 aaKnown RBP13.63□□□□□ -0.23
CNIH1-203ENST00000553660 ZBTB38Q8NAP3 1195 aaPredicted RBP13.63□□□□□ -0.23
CNIH1-203ENST00000553660 ZNF428Q96B54 188 aa13.63□□□□□ -0.23
CNIH1-203ENST00000553660 TAOK3Q9H2K8 898 aa13.63□□□□□ -0.23
CNIH1-203ENST00000553660 KDM4CQ9H3R0 1056 aa13.63□□□□□ -0.23
CNIH1-203ENST00000553660 RNF181Q9P0P0 153 aa13.63□□□□□ -0.23
CNIH1-203ENST00000553660 TNRC6CQ9HCJ0 1690 aaKnown RBP13.63□□□□□ -0.23
CNIH1-203ENST00000553660 BBOX1O75936 387 aa13.62□□□□□ -0.23
CNIH1-203ENST00000553660 SF3B3Q15393 1217 aaKnown RBP13.62□□□□□ -0.23
CNIH1-203ENST00000553660 TMC4Q7Z404 712 aa13.62□□□□□ -0.23
CNIH1-203ENST00000553660 PSMD1Q99460 953 aa13.62□□□□□ -0.23
CNIH1-203ENST00000553660 BEGAINQ9BUH8 593 aa13.62□□□□□ -0.23
CNIH1-203ENST00000553660 SNED1Q8TER0 1413 aa13.62□□□□□ -0.23
CNIH1-203ENST00000553660 SLX4Q8IY92 1834 aa13.62□□□□□ -0.23
CNIH1-203ENST00000553660 FER1L6Q2WGJ9 1857 aa13.61□□□□□ -0.23
CNIH1-203ENST00000553660 PI4KAP2A4QPH2 592 aa13.61□□□□□ -0.23
CNIH1-203ENST00000553660 ATP5J2-PTCD1G3V325 749 aa13.61□□□□□ -0.23
CNIH1-203ENST00000553660 KDM4AO75164 1064 aa13.61□□□□□ -0.23
CNIH1-203ENST00000553660 PCCAP05165 728 aaPredicted RBP13.61□□□□□ -0.23
CNIH1-203ENST00000553660 PRELPP51888 382 aa13.61□□□□□ -0.23
CNIH1-203ENST00000553660 FKBP4Q02790 459 aaKnown RBP eCLIP13.61□□□□□ -0.23
CNIH1-203ENST00000553660 FUT2Q10981 343 aa13.61□□□□□ -0.23
CNIH1-203ENST00000553660 FLIIQ13045 1269 aa13.61□□□□□ -0.23
CNIH1-203ENST00000553660 PI4KAP1Q8N8J0 262 aa13.61□□□□□ -0.23
CNIH1-203ENST00000553660 KDM2BQ8NHM5 1336 aa13.61□□□□□ -0.23
CNIH1-203ENST00000553660 CACNA1FO60840 1977 aa13.6□□□□□ -0.23
CNIH1-203ENST00000553660 SENP3-EIF4A1A0A087X0R7 540 aa13.6□□□□□ -0.23
CNIH1-203ENST00000553660 RASSF7Q02833 373 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms