RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 ROCK1Q13464 1354 aa10.47□□□□□ -0.73
GNPTAB-209ENST00000552009 FAM135BQ49AJ0 1406 aa10.47□□□□□ -0.73
GNPTAB-209ENST00000552009 ADAMTS13Q76LX8 1427 aa10.47□□□□□ -0.73
GNPTAB-209ENST00000552009 SH3PXD2AQ5TCZ1 1133 aa10.46□□□□□ -0.73
GNPTAB-209ENST00000552009 LINC00114Q6XXX2 140 aa10.46□□□□□ -0.73
GNPTAB-209ENST00000552009 C14orf37Q86TY3 774 aa10.46□□□□□ -0.73
GNPTAB-209ENST00000552009 FCHSD1Q86WN1 690 aa10.46□□□□□ -0.73
GNPTAB-209ENST00000552009 CEP63Q96MT8 703 aa10.46□□□□□ -0.73
GNPTAB-209ENST00000552009 MSH6P52701 1360 aa10.46□□□□□ -0.74
GNPTAB-209ENST00000552009 SYT9Q86SS6 491 aa10.45□□□□□ -0.74
GNPTAB-209ENST00000552009 SPOCK3Q9BQ16 436 aa10.45□□□□□ -0.74
GNPTAB-209ENST00000552009 HINFPQ9BQA5 517 aa10.45□□□□□ -0.74
GNPTAB-209ENST00000552009 PPP1R12CQ9BZL4 782 aa10.45□□□□□ -0.74
GNPTAB-209ENST00000552009 SLAIN2Q9P270 581 aa10.45□□□□□ -0.74
GNPTAB-209ENST00000552009 KLF15Q9UIH9 416 aa10.45□□□□□ -0.74
GNPTAB-209ENST00000552009 PTPRUQ92729 1446 aa10.44□□□□□ -0.74
GNPTAB-209ENST00000552009 ATAD2Q6PL18 1390 aa10.44□□□□□ -0.74
GNPTAB-209ENST00000552009 DGKGP49619 791 aa10.44□□□□□ -0.74
GNPTAB-209ENST00000552009 POTEAQ6S8J7 498 aa10.44□□□□□ -0.74
GNPTAB-209ENST00000552009 STAG2Q8N3U4 1231 aa10.44□□□□□ -0.74
GNPTAB-209ENST00000552009 SCG3Q8WXD2 468 aaKnown RBP10.44□□□□□ -0.74
GNPTAB-209ENST00000552009 CHD2O14647 1828 aaKnown RBP10.44□□□□□ -0.74
GNPTAB-209ENST00000552009 ELOA3CA0A087WX78 387 aaPredicted RBP10.43□□□□□ -0.74
GNPTAB-209ENST00000552009 ELOA3DA6NLF2 546 aaPredicted RBP10.43□□□□□ -0.74
GNPTAB-209ENST00000552009 ELOA3BQ3SY89 546 aa10.43□□□□□ -0.74
GNPTAB-209ENST00000552009 ELOA3Q8NG57 546 aa10.43□□□□□ -0.74
GNPTAB-209ENST00000552009 C7orf43Q8WVR3 580 aa10.43□□□□□ -0.74
GNPTAB-209ENST00000552009 BRD7Q9NPI1 651 aa10.43□□□□□ -0.74
GNPTAB-209ENST00000552009 HCN2Q9UL51 889 aa10.43□□□□□ -0.74
GNPTAB-209ENST00000552009 PHLPP1O60346 1717 aa10.42□□□□□ -0.74
GNPTAB-209ENST00000552009 SIN3BO75182 1162 aa10.42□□□□□ -0.74
GNPTAB-209ENST00000552009 HOXB4P17483 251 aaPredicted RBP10.42□□□□□ -0.74
GNPTAB-209ENST00000552009 COL8A1P27658 744 aa10.42□□□□□ -0.74
GNPTAB-209ENST00000552009 ZNF326Q5BKZ1 582 aaKnown RBP10.42□□□□□ -0.74
GNPTAB-209ENST00000552009 VRTNQ9H8Y1 702 aa10.42□□□□□ -0.74
GNPTAB-209ENST00000552009 TBX22Q9Y458 520 aa10.42□□□□□ -0.74
GNPTAB-209ENST00000552009 NRXN3Q9Y4C0 1643 aa10.41□□□□□ -0.74
GNPTAB-209ENST00000552009 KRBA1A5PL33 1030 aa10.41□□□□□ -0.74
GNPTAB-209ENST00000552009 SPEM2Q0P670 501 aa10.41□□□□□ -0.74
GNPTAB-209ENST00000552009 SFSWAPQ12872 951 aaKnown RBP10.41□□□□□ -0.74
GNPTAB-209ENST00000552009 ALDH16A1Q8IZ83 802 aa10.41□□□□□ -0.74
GNPTAB-209ENST00000552009 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.41□□□□□ -0.74
GNPTAB-209ENST00000552009 HSH2DQ96JZ2 352 aa10.41□□□□□ -0.74
GNPTAB-209ENST00000552009 SUSD3Q96L08 255 aa10.41□□□□□ -0.74
GNPTAB-209ENST00000552009 SUV39H2Q9H5I1 410 aa10.41□□□□□ -0.74
GNPTAB-209ENST00000552009 AMOTL2Q9Y2J4 779 aa10.41□□□□□ -0.74
GNPTAB-209ENST00000552009 LRP6O75581 1613 aa10.4□□□□□ -0.74
GNPTAB-209ENST00000552009 COL16A1Q07092 1604 aaPredicted RBP10.4□□□□□ -0.74
GNPTAB-209ENST00000552009 SPDYE3A6NKU9 549 aa10.4□□□□□ -0.74
GNPTAB-209ENST00000552009 DKK1O94907 266 aa10.4□□□□□ -0.74
GNPTAB-209ENST00000552009 LMOD1P29536 600 aaPredicted RBP10.4□□□□□ -0.74
GNPTAB-209ENST00000552009 NGLY1Q96IV0 654 aa10.4□□□□□ -0.74
GNPTAB-209ENST00000552009 C2orf49Q9BVC5 232 aaPredicted RBP10.4□□□□□ -0.74
GNPTAB-209ENST00000552009 KCNH4Q9UQ05 1017 aa10.4□□□□□ -0.74
GNPTAB-209ENST00000552009 SPHKAPQ2M3C7 1700 aa10.4□□□□□ -0.74
GNPTAB-209ENST00000552009 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.4□□□□□ -0.74
GNPTAB-209ENST00000552009 CLTCL1P53675 1640 aa10.4□□□□□ -0.75
GNPTAB-209ENST00000552009 METP08581 1390 aa10.39□□□□□ -0.75
GNPTAB-209ENST00000552009 TRPM2O94759 1503 aa10.39□□□□□ -0.75
GNPTAB-209ENST00000552009 SETD1AO15047 1707 aaKnown RBP10.39□□□□□ -0.75
GNPTAB-209ENST00000552009 C21orf2O43822 256 aa10.39□□□□□ -0.75
GNPTAB-209ENST00000552009 DPYDQ12882 1025 aa10.39□□□□□ -0.75
GNPTAB-209ENST00000552009 PTK7Q13308 1070 aa10.39□□□□□ -0.75
GNPTAB-209ENST00000552009 DIP2AQ14689 1571 aa10.39□□□□□ -0.75
GNPTAB-209ENST00000552009 FAM196BA6NMK8 535 aa10.38□□□□□ -0.75
GNPTAB-209ENST00000552009 ADARB2-AS1A8MUL3 147 aa10.38□□□□□ -0.75
GNPTAB-209ENST00000552009 ATF3P18847 181 aa10.38□□□□□ -0.75
GNPTAB-209ENST00000552009 ANKMY2Q8IV38 441 aa10.38□□□□□ -0.75
GNPTAB-209ENST00000552009 DDX17Q92841 729 aaKnown RBP10.38□□□□□ -0.75
GNPTAB-209ENST00000552009 NAIPQ13075 1403 aa10.38□□□□□ -0.75
GNPTAB-209ENST00000552009 JCADQ9P266 1359 aa10.38□□□□□ -0.75
GNPTAB-209ENST00000552009 USP17L15C9J2P7 530 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 USP17L10C9JJH3 530 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 USP17L13C9JLJ4 530 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 USP17L12C9JPN9 530 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 USP17L11C9JVI0 530 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 USP17L21D6R901 530 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 USP17L18D6R9N7 530 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 USP17L22D6RA61 530 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 USP17L17D6RBQ6 530 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 USP17L19D6RCP7 530 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 USP17L20D6RJB6 530 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 PROCP04070 461 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 ITGB2P05107 769 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 KCNQ4P56696 695 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 TYRO3Q06418 890 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 USP17L24Q0WX57 530 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 CRTC2Q53ET0 693 aaPredicted RBP10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 XRN1Q8IZH2 1706 aaKnown RBP10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 SLC30A3Q99726 388 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 RRBP1Q9P2E9 1410 aaKnown RBP10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 NEXMIFQ5QGS0 1516 aa10.37□□□□□ -0.75
GNPTAB-209ENST00000552009 SETBP1Q9Y6X0 1596 aa10.36□□□□□ -0.75
GNPTAB-209ENST00000552009 BRINP3Q76B58 766 aa10.36□□□□□ -0.75
GNPTAB-209ENST00000552009 ZNF280CQ8ND82 737 aa10.36□□□□□ -0.75
GNPTAB-209ENST00000552009 TNFRSF25Q93038 417 aa10.36□□□□□ -0.75
GNPTAB-209ENST00000552009 C19orf44Q9H6X5 657 aa10.36□□□□□ -0.75
GNPTAB-209ENST00000552009 IGFBP4P22692 258 aa10.35□□□□□ -0.75
GNPTAB-209ENST00000552009 RTN1Q16799 776 aa10.35□□□□□ -0.75
GNPTAB-209ENST00000552009 BTLAQ7Z6A9 289 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 239.9 ms