RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 ENGASEQ8NFI3 743 aa27.69■■■□□ 2.02
NPAS3-211ENST00000551634 RBM6P78332 1123 aaKnown RBP27.68■■■□□ 2.02
NPAS3-211ENST00000551634 APOBRQ0VD83 1088 aa27.68■■■□□ 2.02
NPAS3-211ENST00000551634 C11orf57Q6ZUT1 292 aaPredicted RBP27.68■■■□□ 2.02
NPAS3-211ENST00000551634 USP28Q96RU2 1077 aa27.68■■■□□ 2.02
NPAS3-211ENST00000551634 CEBPZQ03701 1054 aaKnown RBP27.68■■■□□ 2.02
NPAS3-211ENST00000551634 LRRC8AQ8IWT6 810 aa27.68■■■□□ 2.02
NPAS3-211ENST00000551634 ATP5J2-PTCD1G3V325 749 aa27.67■■■□□ 2.02
NPAS3-211ENST00000551634 PTCD1O75127 700 aaKnown RBP27.67■■■□□ 2.02
NPAS3-211ENST00000551634 FBXL16Q8N461 479 aa27.67■■■□□ 2.02
NPAS3-211ENST00000551634 GOLPH3LQ9H4A5 285 aa27.67■■■□□ 2.02
NPAS3-211ENST00000551634 BECN2A8MW95 431 aa27.66■■■□□ 2.02
NPAS3-211ENST00000551634 H7C1W4 665 aa27.66■■■□□ 2.02
NPAS3-211ENST00000551634 E7EWF7 191 aa27.66■■■□□ 2.02
NPAS3-211ENST00000551634 GOLIM4O00461 696 aa27.66■■■□□ 2.02
NPAS3-211ENST00000551634 ZC3H6P61129 1189 aaKnown RBP27.66■■■□□ 2.02
NPAS3-211ENST00000551634 TPD52L1Q16890 204 aaPredicted RBP27.66■■■□□ 2.02
NPAS3-211ENST00000551634 ATG9AQ7Z3C6 839 aa27.66■■■□□ 2.02
NPAS3-211ENST00000551634 MEGF6O75095 1541 aa27.65■■■□□ 2.02
NPAS3-211ENST00000551634 FOXO4P98177 505 aa27.65■■■□□ 2.02
NPAS3-211ENST00000551634 ATP2B3Q16720 1220 aa27.65■■■□□ 2.02
NPAS3-211ENST00000551634 ZSCAN20P17040 1043 aaPredicted RBP27.65■■■□□ 2.02
NPAS3-211ENST00000551634 DMTNQ08495 405 aa27.65■■■□□ 2.02
NPAS3-211ENST00000551634 FEZ1Q99689 392 aa27.65■■■□□ 2.02
NPAS3-211ENST00000551634 HSPD1P10809 573 aaKnown RBP27.64■■■□□ 2.02
NPAS3-211ENST00000551634 IL15P40933 162 aaPredicted RBP27.64■■■□□ 2.02
NPAS3-211ENST00000551634 NCBP1Q09161 790 aaKnown RBP27.64■■■□□ 2.02
NPAS3-211ENST00000551634 PDIA3P30101 505 aaKnown RBP27.64■■■□□ 2.01
NPAS3-211ENST00000551634 CCDC112Q8NEF3 446 aa27.64■■■□□ 2.01
NPAS3-211ENST00000551634 SPEF2Q9C093 1822 aa27.64■■■□□ 2.01
NPAS3-211ENST00000551634 ALS2Q96Q42 1657 aa27.63■■■□□ 2.01
NPAS3-211ENST00000551634 CBX1P83916 185 aa27.63■■■□□ 2.01
NPAS3-211ENST00000551634 NEUROD6Q96NK8 337 aa27.63■■■□□ 2.01
NPAS3-211ENST00000551634 PIP4K2AP48426 406 aaPredicted RBP27.63■■■□□ 2.01
NPAS3-211ENST00000551634 EVCP57679 992 aa27.63■■■□□ 2.01
NPAS3-211ENST00000551634 CCT2P78371 535 aaKnown RBP27.63■■■□□ 2.01
NPAS3-211ENST00000551634 CEP57L1Q8IYX8 460 aa27.63■■■□□ 2.01
NPAS3-211ENST00000551634 NAT10Q9H0A0 1025 aaKnown RBP27.63■■■□□ 2.01
NPAS3-211ENST00000551634 DHX40Q8IX18 779 aaKnown RBP27.62■■■□□ 2.01
NPAS3-211ENST00000551634 FTOQ9C0B1 505 aaKnown RBP eCLIP27.62■■■□□ 2.01
NPAS3-211ENST00000551634 LAMB4A4D0S4 1761 aa27.62■■■□□ 2.01
NPAS3-211ENST00000551634 FSIP1Q8NA03 581 aa27.62■■■□□ 2.01
NPAS3-211ENST00000551634 ME1P48163 572 aa27.61■■■□□ 2.01
NPAS3-211ENST00000551634 RNF113AO15541 343 aaKnown RBP27.61■■■□□ 2.01
NPAS3-211ENST00000551634 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.61■■■□□ 2.01
NPAS3-211ENST00000551634 GTPBP4Q9BZE4 634 aaKnown RBP27.61■■■□□ 2.01
NPAS3-211ENST00000551634 RTEL1Q9NZ71 1219 aa27.61■■■□□ 2.01
NPAS3-211ENST00000551634 C1orf167Q5SNV9 1468 aa27.61■■■□□ 2.01
NPAS3-211ENST00000551634 CARMIL3Q8ND23 1372 aa27.61■■■□□ 2.01
NPAS3-211ENST00000551634 A0A1W2PQ27 194 aa27.61■■■□□ 2.01
NPAS3-211ENST00000551634 A0A1W2PQ64 194 aa27.61■■■□□ 2.01
NPAS3-211ENST00000551634 A0A1W2PQD8 194 aa27.61■■■□□ 2.01
NPAS3-211ENST00000551634 CEP135Q66GS9 1140 aa27.61■■■□□ 2.01
NPAS3-211ENST00000551634 CYP27B1O15528 508 aa27.6■■■□□ 2.01
NPAS3-211ENST00000551634 ADALQ6DHV7 355 aa27.6■■■□□ 2.01
NPAS3-211ENST00000551634 MRPS27Q92552 414 aaKnown RBP27.6■■■□□ 2.01
NPAS3-211ENST00000551634 PRDM10Q9NQV6 1147 aa27.6■■■□□ 2.01
NPAS3-211ENST00000551634 KCND1Q9NSA2 647 aa27.6■■■□□ 2.01
NPAS3-211ENST00000551634 MAST3O60307 1309 aa27.6■■■□□ 2.01
NPAS3-211ENST00000551634 ILDR1Q86SU0 546 aaPredicted RBP27.6■■■□□ 2.01
NPAS3-211ENST00000551634 NCOA5Q9HCD5 579 aaKnown RBP27.6■■■□□ 2.01
NPAS3-211ENST00000551634 FMR1NBQ8N0W7 255 aaPredicted RBP27.59■■■□□ 2.01
NPAS3-211ENST00000551634 ATG3Q9NT62 314 aa27.59■■■□□ 2.01
NPAS3-211ENST00000551634 IFIT1P09914 478 aaKnown RBP27.59■■■□□ 2.01
NPAS3-211ENST00000551634 FOSBP53539 338 aa27.59■■■□□ 2.01
NPAS3-211ENST00000551634 TIMM10P62072 90 aa27.59■■■□□ 2.01
NPAS3-211ENST00000551634 CWC25Q9NXE8 425 aaPredicted RBP27.59■■■□□ 2.01
NPAS3-211ENST00000551634 SKILP12757 684 aa27.58■■■□□ 2.01
NPAS3-211ENST00000551634 LRRFIP1Q32MZ4 808 aaKnown RBP27.58■■■□□ 2.01
NPAS3-211ENST00000551634 GSDMDP57764 484 aa27.58■■■□□ 2.01
NPAS3-211ENST00000551634 CABP4P57796 275 aa27.58■■■□□ 2.01
NPAS3-211ENST00000551634 CGNQ9P2M7 1197 aaKnown RBP27.58■■■□□ 2.01
NPAS3-211ENST00000551634 PCDHA7Q9UN72 937 aa27.58■■■□□ 2.01
NPAS3-211ENST00000551634 PKD1L3Q7Z443 1732 aa27.58■■■□□ 2.01
NPAS3-211ENST00000551634 GLI3P10071 1580 aa27.57■■■□□ 2
NPAS3-211ENST00000551634 EYA2O00167 538 aa27.57■■■□□ 2
NPAS3-211ENST00000551634 CIAO1O76071 339 aa27.57■■■□□ 2
NPAS3-211ENST00000551634 NYAP1Q6ZVC0 841 aa27.57■■■□□ 2
NPAS3-211ENST00000551634 COL18A1P39060 1754 aa27.57■■■□□ 2
NPAS3-211ENST00000551634 CTNNA3Q9UI47 895 aa27.57■■■□□ 2
NPAS3-211ENST00000551634 U2AF2P26368 475 aaKnown RBP eCLIP27.56■■■□□ 2
NPAS3-211ENST00000551634 CCDC9Q9Y3X0 531 aaKnown RBP27.56■■■□□ 2
NPAS3-211ENST00000551634 CCDC69A6NI79 296 aa27.56■■■□□ 2
NPAS3-211ENST00000551634 FDPSP14324 419 aaKnown RBP27.56■■■□□ 2
NPAS3-211ENST00000551634 PTPN14Q15678 1187 aa27.56■■■□□ 2
NPAS3-211ENST00000551634 SLFNL1Q499Z3 407 aa27.56■■■□□ 2
NPAS3-211ENST00000551634 BPIFA3Q9BQP9 254 aa27.56■■■□□ 2
NPAS3-211ENST00000551634 NAP1L2Q9ULW6 460 aaPredicted RBP27.56■■■□□ 2
NPAS3-211ENST00000551634 CCZ1BP86790 482 aa27.55■■■□□ 2
NPAS3-211ENST00000551634 CCZ1P86791 482 aaPredicted RBP27.55■■■□□ 2
NPAS3-211ENST00000551634 IMPACTQ9P2X3 320 aa27.55■■■□□ 2
NPAS3-211ENST00000551634 KCNG4Q8TDN1 519 aa27.55■■■□□ 2
NPAS3-211ENST00000551634 OGFRQ9NZT2 677 aa27.55■■■□□ 2
NPAS3-211ENST00000551634 DHX16O60231 1041 aaKnown RBP27.54■■■□□ 2
NPAS3-211ENST00000551634 YEATS4O95619 227 aa27.54■■■□□ 2
NPAS3-211ENST00000551634 CSB-PGBD3P0DP91 1061 aa27.54■■■□□ 2
NPAS3-211ENST00000551634 GUCY1B3Q02153 619 aa27.54■■■□□ 2
NPAS3-211ENST00000551634 LINC00301Q8NCQ3 95 aa27.54■■■□□ 2
NPAS3-211ENST00000551634 SDF4Q9BRK5 362 aa27.54■■■□□ 2
NPAS3-211ENST00000551634 AOPEPQ8N6M6 819 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms